mRNA_L-elsbetiae_contig16232.4263.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16232.4263.1 vs. uniprot
Match: A0A6H5K5X7_9PHAE (MRG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5X7_9PHAE) HSP 1 Score: 439 bits (1130), Expect = 2.090e-150 Identity = 240/264 (90.91%), Postives = 249/264 (94.32%), Query Frame = 1 Query: 1 QVIKLKPSGDQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQKQLKEKKKKQKVSAAKRXXXXXXXXXXXXXXXXIKRARVDVKKDTEDDTGVAEVKVAMPFTLKKQLVTDWENVTQEPRRLVKLPRELTAADVMKQYMDSKANRSTPQQMARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKHPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTASEVTQVQKLLGDFLRFMQKNHATFFVQEYEEEEPEEPQTA 792 +VIKLKPSG+QFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQ+QLK+KKKK KV+AAKR XXXXXXXXXXXX KRARVDVKKDTEDD+GV EVKVAMPFTLKKQLVTDWE+VTQEPRRLVKLPRE+TAADVM QYMDSKANR TPQQ ARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQK PGKSPSEIYGAEHLLRVFVRLPQLLAQSALT EVTQVQKLL DFLRFMQKNHA FFVQEYE+EEPEEPQTA Sbjct: 36 KVIKLKPSGEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKEDQXXXXXXXXXXXXXKRARVDVKKDTEDDSGVTEVKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPREVTAADVMAQYMDSKANRGTPQQTARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYEDEEPEEPQTA 299
BLAST of mRNA_L-elsbetiae_contig16232.4263.1 vs. uniprot
Match: A0A836CM09_9STRA (Putative chromatin binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM09_9STRA) HSP 1 Score: 231 bits (589), Expect = 9.850e-69 Identity = 135/268 (50.37%), Postives = 187/268 (69.78%), Query Frame = 1 Query: 1 QVIKLKPSGD-QFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQKQLKEKKKKQKVS--AAKRXXXXXXXXXXXXXXXXI------------KRARVDVKKDTEDDTGVAEVKVAMPFTLKKQLVTDWENVTQEPRRLVKLPRELTAADVMKQYMDSKANRSTPQQMARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKHPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTASEVTQVQKLLGDFLRFMQKNHATFFVQEY 759 +++KLK + D + YF+HY+GWNSRWDKW E +LM GPE+ E+QK+LK++ K+++ + AA R XXXXXXXXX K+ R+D K TEDD+ +A++K+ +PFTLK+QLV DWENVTQEPR L+ LPR TAA V+ +++SK T Q+AR +EL+DG+R+YFD+ALPLILLY ER + V + G++ SE+YGAEHLLR+F +LP LLAQ+ L ++EV Q+Q LG+FL++MQKN F +Y Sbjct: 31 RIMKLKQTDDGKHHYFVHYLGWNSRWDKWSEEQELMPDGPESEELQKRLKDEIKQRQGAPKAAVRKSISGGGXXXXXXXXXXXXXXXXXXXAARKKPRIDTKAATEDDSELAQIKLPIPFTLKRQLVQDWENVTQEPRCLLPLPRARTAAHVLDAFIESKRGACTAAQLARFRELVDGLRLYFDRALPLILLYAHEREHHAAVVAHNKGRAASELYGAEHLLRLFTKLPALLAQTNLNSNEVGQLQAKLGEFLKYMQKNAGELFHGDY 298
BLAST of mRNA_L-elsbetiae_contig16232.4263.1 vs. uniprot
Match: A0A7S2RY99_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY99_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.170e-54 Identity = 106/251 (42.23%), Postives = 155/251 (61.75%), Query Frame = 1 Query: 10 KLKPSGDQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQKQLKEKKKKQKVSAAKRXXXXXXXXXXXXXXXXIKRARVDVKKDTEDDT-GVAEVKVAMPFTLKKQLVTDWENVTQ-EPRRLVKLPRELTAADVMKQYMDSKANRSTPQQMARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKHPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTASEVTQVQKLLGDFLRFMQKNHATFFVQE 756 K++ G YF+HY GW+ +WD+WV S L+ GP A +M K+L ++++++ +AA+ K+AR+D ++D E G E+K+ +PFTLKK+LV DWE +TQ P ++V LPR ++ +Y++SK RS+ Q R EL G+R YFD ALP+ LLYRQER QY VQ HP + SE+YGAEHLLR+F +LPQ+L ++ L + E Q+Q LG+F ++MQ+ F QE Sbjct: 54 KVRRVGQDGQYFIHYQGWSKKWDRWVHCSLLLKEGPAADKMSKKLMAEEQQRQETAARLKREARADEKSSQEK---KKARIDHQRDVEAPAQGTFELKLPLPFTLKKKLVEDWERITQTSPGQVVPLPRTPCVKGIIDEYLESKKERSSSQNHQRLTELFGGLRTYFDAALPITLLYRQERAQYYQYVQDHPDATMSEVYGAEHLLRLFTKLPQILGRARLASVEAAQLQTNLGEFFKYMQRQATDLFTQE 301
BLAST of mRNA_L-elsbetiae_contig16232.4263.1 vs. uniprot
Match: A0A4D9CY10_9STRA (MRG domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY10_9STRA) HSP 1 Score: 186 bits (473), Expect = 7.760e-51 Identity = 116/292 (39.73%), Postives = 160/292 (54.79%), Query Frame = 1 Query: 1 QVIKLKPSGDQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQKQLKEKKKKQKVSAAKRXXXXXXXXXXXXXXXXIKRAR----VDVKKDTEDDTGVA-------EVKVAMPFTLKKQLVTDWENVTQEPRRLVKLPRELTAADVMKQYMDSKANRSTPQ--QMARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKHPGKS--------------------PSEIYGAEHLLRVFVRLPQLLAQSALTASEVTQVQKLLGDFLRFMQKNHATFFVQEYEEEEPE 777 Q ++ G YF+HY GW S+WD+WV DL+ +L++Q QL++ K++ A++ KR + DV + + D A +VK+AMPFTLKKQLV DWE VT+ P LV LPR +AA V+ ++ K + T Q+AR +E++ G+R YFDKALPLILLYR ER QY P S PS++YGAEHLLR+FVRLP+LLA + L +E+TQVQ LG+ L+F+QK H F+ Y ++E E Sbjct: 68 QKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQLRQAAKRRPGPVAEKEDGREGG---------FKRGKGEGGEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLAHKKEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAAPPSSACRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSYMKKEEE 350
BLAST of mRNA_L-elsbetiae_contig16232.4263.1 vs. uniprot
Match: A0A7S2GFK6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GFK6_9STRA) HSP 1 Score: 182 bits (461), Expect = 3.490e-50 Identity = 101/235 (42.98%), Postives = 152/235 (64.68%), Query Frame = 1 Query: 76 DKWVVESDLMAAGPEALEMQKQLKEKKKKQKVSAAKRXXXXXXXXXXXXXXXXIKRARVDVKKDTED-DTGVAEVKVAMPFTLKKQLVTDWENVTQ-EPRRLVKLPRELTAADVMKQYMDSKANRSTPQQMARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKHPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTASEVTQVQKLLGDFLRFMQKNHATFFVQEYEEEEP 774 DKWV S +MA GPEA + K+L + +KK++ + K K+ R+DV + E D ++K+ +PFTLKKQLV DWE+++Q +P LV LPR+ T +DV+ ++++ KA R++ + EL++G+RIYFD +LP+ILLY QER Q+ ++HP S+IYGAEHLLR+F +LP +L ++ L + E Q+Q LG+FL+++QKNHAT F++ YEE P Sbjct: 1 DKWVHASLMMAEGPEAEKYAKKLADAEKKREEAKVKARAGEKEAAGQSRR----KKPRIDVGRALEAADETAPQIKLPLPFTLKKQLVDDWESISQMDPHMLVTLPRKPTVSDVISEFLEFKAKRTSTAKQQHLTELLEGLRIYFDNSLPVILLYPQERQQFADITKQHPDVPVSKIYGAEHLLRLFTKLPHVLGKARLASVESAQLQTNLGEFLKYLQKNHATIFLKNYEEYTP 231
BLAST of mRNA_L-elsbetiae_contig16232.4263.1 vs. uniprot
Match: A0A2D4BDJ4_PYTIN (Chromatin modification-related protein EAF3, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDJ4_PYTIN) HSP 1 Score: 185 bits (470), Expect = 1.710e-48 Identity = 105/268 (39.18%), Postives = 154/268 (57.46%), Query Frame = 1 Query: 10 KLKPSGDQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQKQLKEKKKKQ----KVSAAKRXXXXXXXXXXXXXXXXIKRARVDVKKDTE-------DDTGVAEVKVAMPFTLKKQLVTDWENVTQEPRRLVKLPRELTAADVMKQYMDSKANRSTPQQMARAQEL------MDGVRIYFDKALPLILLYRQERTQYDITVQKHPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTASEVTQVQKLLGDFLRFMQKNHATFFVQEYE 762 KLKP+ YF+HY+GW+ +WD+WV S + P ++Q + KE K+ + +A K+ K+ +++ + DTE D +V + MPF+LKKQLV DW+++T EPR+LV LPR+ + A ++ Y++ K + P A +EL M+G++ YFD+AL ILLYR ER QY QKHP SEIYGAEHL+R+FVRLP LL + + E+ Q+Q L DFL++MQK ++ F EY+ Sbjct: 37 KLKPTAST-QYFVHYLGWHKKWDEWVAFSRTLEDTPANRKLQAEAKENAAKEAANKRSAAKKKKISTGGIDPGSTRKSPFKKMKLNPENDTEELPMGNGDFDAARQVALQMPFSLKKQLVEDWKHITHEPRKLVPLPRKPSVAQIIANYLEVKKAKLKPDNAADEKELKNIEGIMEGIQSYFDRALGSILLYRHERQQYQDLQQKHPNTPLSEIYGAEHLVRLFVRLPVLLGSATIPERELAQIQPRLNDFLKYMQKQASSLFTNEYQ 303
BLAST of mRNA_L-elsbetiae_contig16232.4263.1 vs. uniprot
Match: H3GNF0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNF0_PHYRM) HSP 1 Score: 183 bits (465), Expect = 2.370e-48 Identity = 109/275 (39.64%), Postives = 155/275 (56.36%), Query Frame = 1 Query: 4 VIKLKPSGDQFT----YFLHYMGWNSRWDKWVVESDLMAAGPEALEMQKQLKEK---KKKQKVSAAKRXXXXXXXXXXXXXXXXIKRARVDVKKD--------TEDDTGVAEVKVAMPFTLKKQLVTDWENVTQEPRRLVKLPRELTAADVMKQYMDSKANRSTPQQMARAQE------LMDGVRIYFDKALPLILLYRQERTQYDITVQKHPGKSP-SEIYGAEHLLRVFVRLPQLLAQSALTASEVTQVQKLLGDFLRFMQKNHATFFVQEYE 762 V++ + G T Y+LHY GW +WD+WV ++ A P +QKQ K++ KK K A K+ KR + D TE+ ++ + MPF+LKKQLV DW+NVTQ P +LV LPR+ + ++K Y++ K ++ + + +E +M+GV+ YFD+AL ILLYR ER QY QK + P S+IYGAEHL+R+FVRLP LLA S ++ E+ Q+Q L DFL+F+QKN A +FV EYE Sbjct: 31 VLEAEGEGGNATASTQYYLHYQGWAKKWDEWVRHDRVLEASPANRALQKQAKQEVAQAKKDKRLAKKKKISSAGVDTPSSRKSPFKRLKRSTDNDYEEFPGPSTEESAAAKQINIQMPFSLKKQLVEDWKNVTQAPHKLVPLPRKPNVSQIIKTYLEFKKSKVHEDEASEEKEYKNIEGIMEGVQSYFDRALSSILLYRMERRQYQELRQKQAEELPLSQIYGAEHLIRLFVRLPVLLASSNISPRELHQIQARLNDFLKFIQKNSAAWFVTEYE 305
BLAST of mRNA_L-elsbetiae_contig16232.4263.1 vs. uniprot
Match: K3W9B5_GLOUD (MRG domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9B5_GLOUD) HSP 1 Score: 177 bits (449), Expect = 5.600e-48 Identity = 103/260 (39.62%), Postives = 148/260 (56.92%), Query Frame = 1 Query: 40 YFLHYMGWNSRWDKWVVESDLMAAGPEALEMQKQLKEK-KKKQKVSAAKRXXXXXXXXXXXXXXXXIKRARVDVKKDTE-----DDTGVA-------EVKVAMPFTLKKQLVTDWENVTQEPRRLVKLPRELTAADVMKQYMDSKANRSTPQQMARAQE------LMDGVRIYFDKALPLILLYRQERTQYDITVQKHPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTASEVTQVQKLLGDFLRFMQKNHATFFVQEYE 762 Y++HY GW+ +WD+WV ++ P +QKQ KE KKK K + K+ K+ + + + DTE DD + ++ + MPF+LKKQLV DW ++TQEP RLV LPR+ T + ++ Y++ K ++ A +E +M+G++ YFD+AL ILLYR ER QY QK+ SEIYGAEHL+R+FVRLP LL + L E+ +Q L DFL+++QKN AT+F EYE Sbjct: 48 YYVHYQGWHKKWDEWVAHDRVLEDTPANRALQKQAKEDAKKKPKSAVPKKKISTSGIDPSAAKKSPFKKLKRNTENDTEEMPSPDDESILSGGGNAKQISIQMPFSLKKQLVEDWRHITQEPYRLVSLPRKPTVSQIINNYLEFKKSKLKEGDEADEKEYKNLEGIMEGIQSYFDRALGSILLYRMERKQYHEIKQKNGDVPVSEIYGAEHLIRLFVRLPILLGGANLPPRELASIQSRLNDFLKYIQKNAATWFSPEYE 307
BLAST of mRNA_L-elsbetiae_contig16232.4263.1 vs. uniprot
Match: A0A8K1FHE4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHE4_PYTOL) HSP 1 Score: 172 bits (437), Expect = 2.890e-46 Identity = 100/269 (37.17%), Postives = 156/269 (57.99%), Query Frame = 1 Query: 10 KLKPSGDQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQKQLKEK---KKKQKVSAAKRXXXXXXXXXXXXXXXXIKRARVDVKKDTED-DTGVAEVKVA------MPFTLKKQLVTDWENVTQEPRRLVKLPRELTAADVMKQYMDSKANR-------STPQQMARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKHPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTASEVTQVQKLLGDFLRFMQKNHATFFVQEYEE 765 K+ P+ Q YF+HY GW+ +WD+WV ++ P + ++Q + KE+ +K K S AK+ K+ +V+ DTE+ AE++ A +PF+LKKQLV DW+ +T EP RLV LPR+ A ++ Y++ K ++ + ++ + +M+G++ YFD+AL ILLYR ER QY K+ S+IYGAEHL+R+FVRLP LL + + E++Q+Q L DFL++MQK+ A+ F+ EY+E Sbjct: 37 KIAPTS-QTQYFVHYQGWHKKWDEWVSFDRILEDTPASRKLQVEAKERAAEEKANKKSVAKKKINTGGIDPGTARKSPFKKLKVNPDNDTEELPMDKAEMETARQVALQLPFSLKKQLVEDWKRITHEPYRLVPLPRKPCVAQIITNYLEFKKSKLKADDGGADEKEYKNIESIMEGIQAYFDRALSSILLYRFERQQYQEIKSKNEDTPLSQIYGAEHLIRLFVRLPVLLGSATIPERELSQIQPRLNDFLKYMQKHSASLFLNEYQE 304
BLAST of mRNA_L-elsbetiae_contig16232.4263.1 vs. uniprot
Match: A0A3R7JUX1_9STRA (MRG domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JUX1_9STRA) HSP 1 Score: 172 bits (435), Expect = 6.250e-46 Identity = 101/262 (38.55%), Postives = 152/262 (58.02%), Query Frame = 1 Query: 40 YFLHYMGWNSRWDKWVVESDLMAAGPEALEMQKQLKEK--KKKQKVSAAKRXXXXXXXXXXXXXXXXIKRARVDVKKDTEDDTGVA------------EVKVAMPFTLKKQLVTDWENVTQEPRRLVKLPRELTAADVMKQYMDSKANR------STPQQMARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKHPGKSP-SEIYGAEHLLRVFVRLPQLLAQSALTASEVTQVQKLLGDFLRFMQKNHATFFVQEYE 762 Y+LHY GW +WD+WV ++ P ++Q + KE+ + K++ AK+ KR + V + E+ G + ++ + MPF+LKKQLV DW+NVTQ P +LV LPR+ + ++K Y++ K ++ S ++ + +M+GV+ YFD+AL ILLYR ER QY QK + P S+IYGAEHL+R+FVRLP LLA +++ E+ Q+Q L DFL+F+QKN +T+FV EYE Sbjct: 47 YYLHYQGWAKKWDEWVRHDRVLEDTPANRKLQLKAKEELAQAKKEKRLAKKKISSAGVDAPSSRKSPFKRMKRSVDNEYEEFPGPSPDGANEETPTAKQINIQMPFSLKKQLVEDWKNVTQAPYKLVPLPRKPNVSQIIKTYLEFKKSKVHEGEASEEKEYKNIEGIMEGVQSYFDRALSSILLYRMERRQYQELRQKQEEEIPLSQIYGAEHLIRLFVRLPVLLASASIPPRELHQIQARLNDFLKFIQKNSSTWFVTEYE 308 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16232.4263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16232.4263.1 >prot_L-elsbetiae_contig16232.4263.1 ID=prot_L-elsbetiae_contig16232.4263.1|Name=mRNA_L-elsbetiae_contig16232.4263.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=247bp MGWNSRWDKWVVESDLMAAGPEALEMQKQLKEKKKKQKVSAAKRKEDQKAback to top mRNA from alignment at L-elsbetiae_contig16232:147..3675- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16232.4263.1 ID=mRNA_L-elsbetiae_contig16232.4263.1|Name=mRNA_L-elsbetiae_contig16232.4263.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3529bp|location=Sequence derived from alignment at L-elsbetiae_contig16232:147..3675- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16232:147..3675- >mRNA_L-elsbetiae_contig16232.4263.1 ID=mRNA_L-elsbetiae_contig16232.4263.1|Name=mRNA_L-elsbetiae_contig16232.4263.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1482bp|location=Sequence derived from alignment at L-elsbetiae_contig16232:147..3675- (Laminarionema elsbetiae ELsaHSoW15)back to top |