mRNA_L-elsbetiae_contig16191.4250.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16191.4250.1 vs. uniprot
Match: D7FUP3_ECTSI (Proline--tRNA ligase, central part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP3_ECTSI) HSP 1 Score: 217 bits (552), Expect = 2.480e-66 Identity = 106/125 (84.80%), Postives = 111/125 (88.80%), Query Frame = 1 Query: 1 KCGGTSK-DGAASRRITPRAENFSQWYLDVIAASEMTENSPVKGCMVIRPWGMAIWESFKDDMDKASACSRIKTHDVDNAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLCKGPDGTLIPDP 372 K G SK D ASRRITPRAENFSQWYLD+IAASEMTENSP KGCMVIRPWGMAIW++FKDDMDK RIKT+DVDNAYFPLLIPQSFLTKEAEHV+GFAKECAVVTHHRLCK DGTLIPDP Sbjct: 80 KGGNASKADQQASRRITPRAENFSQWYLDIIAASEMTENSPTKGCMVIRPWGMAIWDAFKDDMDK-----RIKTYDVDNAYFPLLIPQSFLTKEAEHVDGFAKECAVVTHHRLCKSDDGTLIPDP 199
BLAST of mRNA_L-elsbetiae_contig16191.4250.1 vs. uniprot
Match: A0A835Z2K2_9STRA (Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K2_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.120e-46 Identity = 77/117 (65.81%), Postives = 97/117 (82.91%), Query Frame = 1 Query: 25 GAASRRITPRAENFSQWYLDVIAASEMTENSPVKGCMVIRPWGMAIWESFKDDMDKASACSRIKTHDVDNAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLCKGPDGT-LIPDP 372 G S +ITPR +++SQWYLDVI+A+E+ ++SPVKGCMVIRPWGMA+W++ ++D+D +RIK V NAYFPL IP+SFL+KEAEHVEGFAKECAVVTHHRLC P+G L+PDP Sbjct: 141 GQESDKITPRNQDYSQWYLDVISAAELVDSSPVKGCMVIRPWGMAVWDALRNDLD-----ARIKDKGVSNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCADPNGGGLVPDP 252
BLAST of mRNA_L-elsbetiae_contig16191.4250.1 vs. uniprot
Match: A0A7R9ZD29_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZD29_9STRA) HSP 1 Score: 155 bits (392), Expect = 7.260e-46 Identity = 73/118 (61.86%), Postives = 93/118 (78.81%), Query Frame = 1 Query: 22 DGAASRRITPRAENFSQWYLDVIAASEMTENSPVKGCMVIRPWGMAIWESFKDDMDKASACSRIKTHDVDNAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLCKGPDGT-LIPDP 372 D A S ITPR+EN+S+WY DVI A+ + E SPV+GCMVI+PWGM++W+ ++++D++ IK H +NAYFPLLIP+SFL+KEAEHV+GFAKECAVVTHHRL DGT LI DP Sbjct: 45 DDAESDYITPRSENYSKWYTDVIRAAGLAELSPVRGCMVIKPWGMSLWDRVRNELDES-----IKEHGAENAYFPLLIPKSFLSKEAEHVDGFAKECAVVTHHRLTANEDGTDLIADP 157
BLAST of mRNA_L-elsbetiae_contig16191.4250.1 vs. uniprot
Match: A0A7S2GJS1_9STRA (Proline--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJS1_9STRA) HSP 1 Score: 162 bits (409), Expect = 4.410e-45 Identity = 76/123 (61.79%), Postives = 91/123 (73.98%), Query Frame = 1 Query: 7 GGTSKDGAASRRITPRAENFSQWYLDVIAASEMTENSPVKGCMVIRPWGMAIWESFKDDMDKASACSRIKTHDVDNAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLCKGPDGT-LIPDP 372 GG S ITPRA ++SQWY DV+ SE+ + SPV+GCMVIRPWGMA+W+ +DD+DK RIK NAYFPL+IP SFL+KEA+HV+GFAKECAV+THHRLC PDG LIPDP Sbjct: 3 GGGKAQADLSDVITPRATDYSQWYQDVVYNSELVDQSPVRGCMVIRPWGMALWDLMRDDLDK-----RIKATGAQNAYFPLMIPTSFLSKEADHVDGFAKECAVITHHRLCANPDGAGLIPDP 120
BLAST of mRNA_L-elsbetiae_contig16191.4250.1 vs. uniprot
Match: W7TTB8_9STRA (Proline--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTB8_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.390e-44 Identity = 76/116 (65.52%), Postives = 94/116 (81.03%), Query Frame = 1 Query: 31 ASRRITPRAENFSQWYLDVIAASEMTENSPVKGCMVIRPWGMAIWESFKDDMDKASACSRIKTHDVDNAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLCKGPDGT--LIPDP 372 +S ITPR EN+SQWYLDVIAA+++ + SPVKGCMVI+P+GMA+W++ +D++DK RIK + NAYFPL IP+SFL+KEAEHVEGFAKECAVVTHHRLC P G L+PDP Sbjct: 184 SSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDK-----RIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDP 294
BLAST of mRNA_L-elsbetiae_contig16191.4250.1 vs. uniprot
Match: A0A7S3XX04_HETAK (Proline--tRNA ligase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX04_HETAK) HSP 1 Score: 162 bits (410), Expect = 2.190e-44 Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 1 Query: 28 AASRRITPRAENFSQWYLDVIAASEMTENSPVKGCMVIRPWGMAIWESFKDDMDKASACSRIKTHDVDNAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLCKGPDGT-LIPDP 372 A S ITPR E++SQWY DV+AA+ + + SPV+GCMVI+PWGMAIW++ ++D+D+ IK +V NAYFPL IP+SFL+KEAEHVEGFAKECAVVTHHRLC P+G LIPDP Sbjct: 157 AKSDYITPREEDYSQWYQDVVAAAGLVDQSPVRGCMVIKPWGMAIWDALREDLDR-----EIKAKEVQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCADPEGGGLIPDP 267
BLAST of mRNA_L-elsbetiae_contig16191.4250.1 vs. uniprot
Match: A0A7S2SII9_9STRA (Proline--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SII9_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.540e-44 Identity = 73/111 (65.77%), Postives = 89/111 (80.18%), Query Frame = 1 Query: 43 ITPRAENFSQWYLDVIAASEMTENSPVKGCMVIRPWGMAIWESFKDDMDKASACSRIKTHDVDNAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLCKGPDGT-LIPDP 372 ITPR E+++QWY DV+ AS++ + SPV+GCMVI+PWGMAIW++ ++D+D+ RI NAYFPL IPQSFL+KEAEHVEGFAKECAVVTHHRLC PDG LIPDP Sbjct: 90 ITPRQEDYAQWYQDVVYASDLVDQSPVRGCMVIKPWGMAIWDNLRNDLDR-----RISDSGASNAYFPLFIPQSFLSKEAEHVEGFAKECAVVTHHRLCASPDGNGLIPDP 195
BLAST of mRNA_L-elsbetiae_contig16191.4250.1 vs. uniprot
Match: A0A7S0G925_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G925_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.640e-43 Identity = 68/111 (61.26%), Postives = 86/111 (77.48%), Query Frame = 1 Query: 43 ITPRAENFSQWYLDVIAASEMTENSPVKGCMVIRPWGMAIWESFKDDMDKASACSRIKTHDVDNAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLCKGPDGT-LIPDP 372 I PR EN+S+WY D+I +++ + SPV+GCMVI+PWGM++W+S + D+DK R+ H NAYFPLLIP+SFL+KEAEHVEGFAKECAVVTHHRL P+G LI DP Sbjct: 33 ICPRKENYSKWYNDLIRVADLAQTSPVRGCMVIKPWGMSLWDSIRTDLDK-----RVIEHGASNAYFPLLIPKSFLSKEAEHVEGFAKECAVVTHHRLKADPEGGGLIADP 138
BLAST of mRNA_L-elsbetiae_contig16191.4250.1 vs. uniprot
Match: L1JIE1_GUITC (Proline--tRNA ligase (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JIE1_GUITC) HSP 1 Score: 156 bits (394), Expect = 5.530e-43 Identity = 73/111 (65.77%), Postives = 86/111 (77.48%), Query Frame = 1 Query: 43 ITPRAENFSQWYLDVIAASEMTENSPVKGCMVIRPWGMAIWESFKDDMDKASACSRIKTHDVDNAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLCKGPDGT-LIPDP 372 ITPRA ++SQWY DVI A++M + SPVKGCMVIRPWGMA+W+ KD++++ RIK NAYFPL IP SFL+KEAEHVEGFAKECAVVTHHRLC P G L+ DP Sbjct: 7 ITPRATDYSQWYQDVIQAAQMVDQSPVKGCMVIRPWGMAVWDELKDELNR-----RIKETGTQNAYFPLFIPMSFLSKEAEHVEGFAKECAVVTHHRLCADPSGKGLMADP 112
BLAST of mRNA_L-elsbetiae_contig16191.4250.1 vs. uniprot
Match: K0SCM4_THAOC (Proline--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SCM4_THAOC) HSP 1 Score: 157 bits (396), Expect = 1.930e-42 Identity = 73/119 (61.34%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 22 DGAASRRITPRAENFSQWYLDVIAASEMTENSPVKGCMVIRPWGMAIWESFKDDMDKASACSRIKTHDVDNAYFPLLIPQSFLTKEAEHVEGFAKECAVVTHHRLCKGP--DGTLIPDP 372 D S ITPRAEN+S+WY D+I E+ E SPV+GCMVI+PWGM++W+ ++D+D +RIK H +NAYFPLLIP+SFL+KEAEHV+GFAKECAVVTHHRL P +G LI DP Sbjct: 145 DDVESDYITPRAENYSKWYNDIIRVCELAETSPVRGCMVIKPWGMSLWDQVRNDLD-----ARIKDHGAENAYFPLLIPKSFLSKEAEHVDGFAKECAVVTHHRLTADPSGEGGLIADP 258 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16191.4250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16191.4250.1 >prot_L-elsbetiae_contig16191.4250.1 ID=prot_L-elsbetiae_contig16191.4250.1|Name=mRNA_L-elsbetiae_contig16191.4250.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp MWWYIEGRSRFPAHHAEGGELQPVVPGRDRGVGDDREQPRQGLHGHQTLGback to top mRNA from alignment at L-elsbetiae_contig16191:525..2103+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16191.4250.1 ID=mRNA_L-elsbetiae_contig16191.4250.1|Name=mRNA_L-elsbetiae_contig16191.4250.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1579bp|location=Sequence derived from alignment at L-elsbetiae_contig16191:525..2103+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16191:525..2103+ >mRNA_L-elsbetiae_contig16191.4250.1 ID=mRNA_L-elsbetiae_contig16191.4250.1|Name=mRNA_L-elsbetiae_contig16191.4250.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig16191:525..2103+ (Laminarionema elsbetiae ELsaHSoW15)back to top |