mRNA_L-elsbetiae_contig16151.4230.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A4Y5T7V9_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7V9_9PHAE) HSP 1 Score: 202 bits (513), Expect = 3.690e-65 Identity = 97/120 (80.83%), Postives = 111/120 (92.50%), Query Frame = 1 Query: 1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 360 M+Y +EYY+ILIF IS++LA IIFGASY LA+ SDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVF+FPWA+SLSQ+PS+ YWS++DFLFELV+GFIYAWKIGSL+W Sbjct: 1 MFYLHEYYSILIFLVISVLLAFIIFGASYLLALSNSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFVFPWAISLSQMPSIGYWSMMDFLFELVVGFIYAWKIGSLEWS 120
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A0U1XDC4_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=66 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XDC4_9PHAE) HSP 1 Score: 200 bits (509), Expect = 1.500e-64 Identity = 97/120 (80.83%), Postives = 108/120 (90.00%), Query Frame = 1 Query: 1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 360 M++ EYY LIF G S+ LA +IFGASY LAI SDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPWA+SLSQLPS+ YWS++DFLFELV+GFIYAW+IGSLDWE Sbjct: 1 MFFLKEYYPALIFLGFSLFLAALIFGASYILAISDSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAVSLSQLPSIGYWSMMDFLFELVVGFIYAWQIGSLDWE 120
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: Q2TU99_DICDH (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TU99_DICDH) HSP 1 Score: 196 bits (499), Expect = 4.870e-63 Identity = 94/119 (78.99%), Postives = 109/119 (91.60%), Query Frame = 1 Query: 1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDW 357 M+Y +EYY +L+F ISI+LA +IFG SY LA K+DSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVF+FPWA+SLSQLPS+ YWS++DFLFEL++GFIYAWKIGSL+W Sbjct: 1 MFYLHEYYPVLLFFLISILLAFLIFGLSYILAFSKADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFVFPWAVSLSQLPSVGYWSMMDFLFELIVGFIYAWKIGSLEW 119
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: E6ZET4_ECTSI (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZET4_ECTSI) HSP 1 Score: 196 bits (498), Expect = 7.140e-63 Identity = 93/120 (77.50%), Postives = 109/120 (90.83%), Query Frame = 1 Query: 1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 360 M++ EYY +LIF G S+ LA +IFGAS+ LA+ +D+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPW++SLSQLPS+ YWS+LDFLFELV+GFIYAW+IGSLDWE Sbjct: 1 MFFLKEYYPVLIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: Q94YZ1_PYLLI (NADH-ubiquinone oxidoreductase chain 3 n=3 Tax=Ectocarpales TaxID=2877 RepID=Q94YZ1_PYLLI) HSP 1 Score: 195 bits (496), Expect = 1.440e-62 Identity = 95/120 (79.17%), Postives = 106/120 (88.33%), Query Frame = 1 Query: 1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 360 M+ EYY LIF S +LA IIFGASY LA+ +DSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPWA+SLSQLPS+ YWS++DFLFELV+GFIYAW+IGSLDWE Sbjct: 1 MFLLKEYYPALIFLVFSFVLAAIIFGASYILAVSSADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAVSLSQLPSIGYWSMMDFLFELVVGFIYAWQIGSLDWE 120
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A8F0K0X7_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K0X7_9PHAE) HSP 1 Score: 191 bits (486), Expect = 4.670e-61 Identity = 91/119 (76.47%), Postives = 107/119 (89.92%), Query Frame = 1 Query: 1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDW 357 M+ F+EYY +L+F + ILA+IIFGASY L K+D+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPWA++LSQLPSL YWS++DFL ELV+GFIYAW+IGSL+W Sbjct: 1 MFCFHEYYPVLLFLVVGFILAVIIFGASYFLVFSKADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAITLSQLPSLGYWSMMDFLLELVVGFIYAWQIGSLEW 119
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A0U1WNN7_SARFS (NADH-ubiquinone oxidoreductase chain 3 n=22 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1WNN7_SARFS) HSP 1 Score: 191 bits (485), Expect = 6.840e-61 Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 1 Query: 1 MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 360 M++ EY LI+ S+ILA +IFGASY LA+ +SD+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVF+FPWA SLSQLP + YWS++DFLFELV+GFIYAW+IGSLDWE Sbjct: 1 MFFLREYSPALIYLCFSLILASVIFGASYTLALAESDNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFIFPWAASLSQLPPVGYWSVIDFLFELVVGFIYAWQIGSLDWE 120
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A8E8U4L6_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4L6_9PHAE) HSP 1 Score: 182 bits (461), Expect = 3.110e-57 Identity = 85/115 (73.91%), Postives = 103/115 (89.57%), Query Frame = 1 Query: 16 EYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 360 EYY IL+F S+ L+++IFGASY +I + D+EK+SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPW ++LS+LP++ YWS++DF+ ELVIGFIYAW+IGSLDWE Sbjct: 6 EYYPILLFITFSLFLSLLIFGASYTFSIAEPDNEKVSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWVVTLSELPAVGYWSMVDFIIELVIGFIYAWQIGSLDWE 120
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A7S6UA31_9STRA (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA31_9STRA) HSP 1 Score: 176 bits (447), Expect = 4.660e-55 Identity = 87/117 (74.36%), Postives = 102/117 (87.18%), Query Frame = 1 Query: 13 NEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLP-SLAYWSILDFLFELVIGFIYAWKIGSLDWE 360 EYY IL+F+ +SI LA +IFGASYALA+ K D+EKLSSYECGFDPYEDARNAFDVRFYLVAILFL+FD+E VFLFPWA+ L Q SL WS++DFLFEL++GF+YAW+IGSLDWE Sbjct: 7 QEYYPILVFTFLSIGLAGLIFGASYALALAKPDTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLIFDLEAVFLFPWAVGLGQQSTSLGLWSMIDFLFELLVGFVYAWQIGSLDWE 123
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Match: A0A0K2RWM0_9STRA (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RWM0_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.570e-52 Identity = 78/116 (67.24%), Postives = 99/116 (85.34%), Query Frame = 1 Query: 13 NEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWALSLSQLPSLAYWSILDFLFELVIGFIYAWKIGSLDWE 360 EYY IL+F ++IIL+ +I GASY LA+ D+EKLS+YECGFDPYEDAR+ FDVRFYLVAILF++FDIE +FLFPWA+SL Q+ SL +WS++DF+ EL +GFIYAWKIG+L+WE Sbjct: 8 QEYYPILLFLSVAIILSAVILGASYLLAVQNPDTEKLSAYECGFDPYEDARHTFDVRFYLVAILFIIFDIEAMFLFPWAVSLDQIGSLGFWSMVDFILELGVGFIYAWKIGALEWE 123 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16151.4230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16151.4230.1 >prot_L-elsbetiae_contig16151.4230.1 ID=prot_L-elsbetiae_contig16151.4230.1|Name=mRNA_L-elsbetiae_contig16151.4230.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp MYYFNEYYAILIFSGISIILAIIIFGASYALAIVKSDSEKLSSYECGFDPback to top mRNA from alignment at L-elsbetiae_contig16151:654..1016- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16151.4230.1 ID=mRNA_L-elsbetiae_contig16151.4230.1|Name=mRNA_L-elsbetiae_contig16151.4230.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=363bp|location=Sequence derived from alignment at L-elsbetiae_contig16151:654..1016- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16151:654..1016- >mRNA_L-elsbetiae_contig16151.4230.1 ID=mRNA_L-elsbetiae_contig16151.4230.1|Name=mRNA_L-elsbetiae_contig16151.4230.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=726bp|location=Sequence derived from alignment at L-elsbetiae_contig16151:654..1016- (Laminarionema elsbetiae ELsaHSoW15)back to top |