mRNA_L-elsbetiae_contig1604.4163.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1604.4163.1 vs. uniprot
Match: A0A2D4BMS5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS5_PYTIN) HSP 1 Score: 82.4 bits (202), Expect = 6.670e-19 Identity = 38/66 (57.58%), Postives = 51/66 (77.27%), Query Frame = 1 Query: 31 VPPSVIPDHHQGSKSDFGGEVDIEEAIDKSGCSSVYYLLEDCLGEHDRDWRRCQ---EQVERCRDR 219 VPP+V+ HQGSKSDFG ++DI++ I+K GCS YY LE+CLGE+DRDW +CQ +Q++ C DR Sbjct: 9 VPPAVVAGLHQGSKSDFGEDLDIDDMIEKMGCSKDYYALEECLGEYDRDWTKCQTYVKQLKVCNDR 74
BLAST of mRNA_L-elsbetiae_contig1604.4163.1 vs. uniprot
Match: A0A8K1CK47_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK47_PYTOL) HSP 1 Score: 79.3 bits (194), Expect = 7.550e-18 Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 1 Query: 37 PSVIPDHHQGSKSDFGGEVDIEEAIDKSGCSSVYYLLEDCLGEHDRDWRRCQEQVER---CRDR 219 P VIP H GS+SDFG +VDI+E I+K GCS YY LE+CLGE+DRDW +CQ +V+ C DR Sbjct: 9 PPVIPGLHAGSQSDFGSDVDIDEMIEKMGCSKDYYKLEECLGEYDRDWTKCQVEVKALKACNDR 72
BLAST of mRNA_L-elsbetiae_contig1604.4163.1 vs. uniprot
Match: K3X4R7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4R7_GLOUD) HSP 1 Score: 75.1 bits (183), Expect = 4.390e-16 Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 31 VPPSVIPDHHQGSKSDFGGEVDIEEAIDKSGCSSVYYLLEDCLGEHDRDWRRCQEQVER---CRDR 219 VPP V+P H GS+SDFG ++DI+ I+K GC+ YY LE+CLGE+DR+W +CQ QV++ C DR Sbjct: 20 VPP-VVPGLHAGSQSDFGDDIDIDAMIEKMGCAQDYYKLEECLGEYDRNWTKCQAQVKQLKLCNDR 84
BLAST of mRNA_L-elsbetiae_contig1604.4163.1 vs. uniprot
Match: A0A5D6XP60_9STRA (HECT domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP60_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 3.370e-15 Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 34 PPSVIPDHHQGSKSDFGGEVDIEEAIDKSGCSSVYYLLEDCLGEHDRDWRRCQEQVERCR 213 PP V+ H GSKSDFG ++DI++ I++ GC+ YY LEDCLGE DRDW +CQ QV++ R Sbjct: 817 PPQVVAGLHAGSKSDFGADLDIDDMIERMGCAKDYYKLEDCLGEFDRDWTKCQAQVKQLR 876
BLAST of mRNA_L-elsbetiae_contig1604.4163.1 vs. uniprot
Match: A0A1V9YI71_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YI71_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.740e-13 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 34 PPSVIPD-HHQGSKSDFGGEVDIEEAIDKSGCSSVYYLLEDCLGEHDRDWRRCQEQVERCR 213 PPSV+P H GSKSDF DIE+ ID++ C+ VYY LEDCL E+DR+W +CQ+ V+ R Sbjct: 5 PPSVLPPPQHLGSKSDFD---DIEDLIDRNACAKVYYKLEDCLAEYDRNWSKCQDIVKALR 62
BLAST of mRNA_L-elsbetiae_contig1604.4163.1 vs. uniprot
Match: A0A024TVW5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVW5_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.030e-11 Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 25 PPVPPSVIPDH-HQGSKSDFGGEVDIEEAIDKSGCSSVYYLLEDCLGEHDRDWRRCQEQV 201 PPVPP+ H GSKSDF DIE I+++ C+ YY LE+CLGE+DRDW +CQE V Sbjct: 6 PPVPPTATSAPIHLGSKSDFD---DIEGMIERNKCAKEYYKLEECLGEYDRDWTKCQEVV 62
BLAST of mRNA_L-elsbetiae_contig1604.4163.1 vs. uniprot
Match: A0A6G0XA92_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XA92_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 4.610e-10 Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 1 Query: 16 PDRPPVP-PSVIPDHHQGSKSDFGGEVDIEEAIDKSGCSSVYYLLEDCLGEHDRDWRRCQEQV 201 P P +P PS +P H GSKSDF DIE I+++ C+ YY LE+CLGE DRDW +CQ+ V Sbjct: 2 PPPPSIPKPSEVP-LHLGSKSDFD---DIEGMIERNKCAKEYYKLEECLGEFDRDWTKCQDVV 60
BLAST of mRNA_L-elsbetiae_contig1604.4163.1 vs. uniprot
Match: W4FY67_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FY67_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 1.960e-9 Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 1 Query: 28 PVPPSVIPDH-HQGSKSDFGGEVDIEEAIDKSGCSSVYYLLEDCLGEHDRDWRRCQEQV 201 P+PP+ H GSKSDF DIE I+++ C+ YY LE+CLGE+DRDW +CQ+ V Sbjct: 7 PLPPTAATAPVHLGSKSDFD---DIEGMIERNKCAVEYYKLEECLGEYDRDWTKCQDIV 62
BLAST of mRNA_L-elsbetiae_contig1604.4163.1 vs. uniprot
Match: A0A485LEE4_9STRA (Aste57867_19537 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEE4_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 5.590e-9 Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 1 Query: 25 PPVPPSVIPDHHQGSKSDFGGEVDIEEAIDKSGCSSVYYLLEDCLGEHDRDWRRCQEQV 201 PP+P S P H GSKSD+ DI+ I+++ C+ YY LE+CLGE DRDW +CQ+ V Sbjct: 9 PPIP-SAAP-LHLGSKSDYD---DIDGMIERNKCAKEYYKLEECLGEFDRDWTKCQDVV 62
BLAST of mRNA_L-elsbetiae_contig1604.4163.1 vs. uniprot
Match: A0A5B8MJ19_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJ19_9CHLO) HSP 1 Score: 55.8 bits (133), Expect = 5.060e-8 Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 1 Query: 55 HHQGSKSDFGGEVD-IEEAIDKSGCSSVYYLLEDCLGEHDRDWRRCQEQV 201 H ++S G E+D +E+ I+++GCS YY LE CLGE++RDWR+CQ++V Sbjct: 14 HVARTRSPTGEELDDVEKVIEQAGCSKTYYELEVCLGENERDWRKCQKEV 63 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1604.4163.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1604.4163.1 >prot_L-elsbetiae_contig1604.4163.1 ID=prot_L-elsbetiae_contig1604.4163.1|Name=mRNA_L-elsbetiae_contig1604.4163.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=73bp MGSKGPDRPPVPPSVIPDHHQGSKSDFGGEVDIEEAIDKSGCSSVYYLLEback to top mRNA from alignment at L-elsbetiae_contig1604:1620..1838+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1604.4163.1 ID=mRNA_L-elsbetiae_contig1604.4163.1|Name=mRNA_L-elsbetiae_contig1604.4163.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=219bp|location=Sequence derived from alignment at L-elsbetiae_contig1604:1620..1838+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1604:1620..1838+ >mRNA_L-elsbetiae_contig1604.4163.1 ID=mRNA_L-elsbetiae_contig1604.4163.1|Name=mRNA_L-elsbetiae_contig1604.4163.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=438bp|location=Sequence derived from alignment at L-elsbetiae_contig1604:1620..1838+ (Laminarionema elsbetiae ELsaHSoW15)back to top |