mRNA_L-elsbetiae_contig1579.4032.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: A0A6H5JGF9_9PHAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF9_9PHAE) HSP 1 Score: 147 bits (372), Expect = 3.100e-42 Identity = 75/88 (85.23%), Postives = 81/88 (92.05%), Query Frame = 3 Query: 39 MSARLSGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVKAAAGVTVERR 302 MSARLSGVQREVN+LYRLLLRAA++KDGG W G+TT LVRAEFR QAESV R DFRTIEHLLRAGNKKLKLL+MPGVKAAAG+TV RR Sbjct: 1 MSARLSGVQREVNKLYRLLLRAARVKDGGEWAGSTTELVRAEFRAQAESVARTDFRTIEHLLRAGNKKLKLLKMPGVKAAAGITVVRR 88
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: D7FX23_ECTSI (Heat shock protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX23_ECTSI) HSP 1 Score: 137 bits (346), Expect = 1.050e-37 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 3 Query: 54 SGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVKAAAGVTVERR 302 S +REVNQLYRLLLRAA++KDGG W G+TT LVRAEFR QAESVGR DFRTIEHLLRAGNKKLKLL+MPGVKAAAG+TV RR Sbjct: 52 SPTKREVNQLYRLLLRAARVKDGGEWAGSTTELVRAEFRAQAESVGRTDFRTIEHLLRAGNKKLKLLKMPGVKAAAGITVARR 134
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: A0A7S1ZYE5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZYE5_TRICV) HSP 1 Score: 73.2 bits (178), Expect = 5.620e-13 Identity = 46/110 (41.82%), Postives = 59/110 (53.64%), Query Frame = 3 Query: 45 ARLSGVQREVNQLYRLLLRAAKLKD---------GGGW----------------TGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVKAAAGVTVER 299 ARLSG+QR+V LYR +LR A KD GG + TTT+ R+EFR++A S+ R DFRTIEH++R G K++KLL MPGV R Sbjct: 5 ARLSGLQRQVLALYRSVLREAARKDRSAASNRNDGGEYFLVLLSTDKCPSSPPGDATTTSYARSEFRKKAASIPRNDFRTIEHMIRWGQKQIKLLRMPGVSFVGSPNARR 114
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: C5DJD6_LACTC (KLTH0F15576p n=2 Tax=Lachancea TaxID=300275 RepID=C5DJD6_LACTC) HSP 1 Score: 62.0 bits (149), Expect = 3.350e-9 Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 3 Query: 39 MSARLSGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVK 272 M+ RLSG+QREV Q+YR +RAA K T +R EFR Q + + R DF TIEHLLR G+++L++ P VK Sbjct: 1 MAKRLSGLQREVLQMYRQCIRAAHDKPKANQPNFVTH-IRKEFR-QYQDLPRKDFSTIEHLLRVGHRRLEMYSQPEVK 76
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: A0A6U0URI4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0URI4_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 5.090e-9 Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 54 SGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLE 257 SGVQ EV LYR LLR AK K T A+VR +FRE A SV R++ R IEHL+R G KK++LL+ Sbjct: 65 SGVQTEVLNLYRQLLRLAKAKGPD-----TYAMVRNKFREDARSVKRSEIRLIEHLVRQGKKKVRLLQ 127
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: K3X5D9_GLOUD (Complex1_LYR_dom domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5D9_GLOUD) HSP 1 Score: 60.1 bits (144), Expect = 3.700e-8 Identity = 41/101 (40.59%), Postives = 56/101 (55.45%), Query Frame = 3 Query: 6 LLAVTGNPAVTMS---ARLSGVQREVNQLYRLLLRAAKLKD------GGGWTGTTTAL--VRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLE-MPGVK 272 ++AV + A T+ A SG+Q +V LY+ LR A+ KD G T + L VR FR+ A SVGR DF IEHL+R G + +K++E M G K Sbjct: 1 MVAVVNSAAKTLKPKGATHSGLQMQVLALYKKALRTAQQKDRELVAASSGATAEVSTLTYVRERFRDDARSVGRMDFNVIEHLIRKGERDIKMMERMKGAK 101
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: C1E625_MICCC (Complex1_LYR_dom domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E625_MICCC) HSP 1 Score: 58.2 bits (139), Expect = 1.010e-7 Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 3 Query: 48 RLSGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVKAAAGVT 290 RLSG+ R+ L+R LLRAA+ K G A +RAEF E+ + D + +EH +RAG KKL L++ P V AA+G++ Sbjct: 5 RLSGLARQALSLHRALLRAARRKSPEARAGIEAA-IRAEF-ERHRHLDPRDLQAVEHRIRAGRKKLALIDDPNVVAASGMS 83
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: C1MMP0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MMP0_MICPC) HSP 1 Score: 57.8 bits (138), Expect = 1.310e-7 Identity = 34/78 (43.59%), Postives = 45/78 (57.69%), Query Frame = 3 Query: 45 ARLSGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVKAA 278 ARLSG+ ++V L+R LLRAA+ KD + +R +F A R D +EHL+RAGNKKL +L P V A Sbjct: 4 ARLSGLAKQVLSLHRSLLRAARSKDATA-RAAISRQIRDDFERHARLDPRKDVLLVEHLIRAGNKKLAMLRDPNVVGA 80
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: A0A2D4C155_PYTIN (Complex1_LYR_dom domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C155_PYTIN) HSP 1 Score: 57.4 bits (137), Expect = 2.610e-7 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 3 Query: 45 ARLSGVQREVNQLYRLLLRAAKLKDGG-----------GWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVKAAAGVTVER 299 AR SG+Q +V L+R LR AK KD G + VR FR+ A SVGR++F IEHLLR G + LK+LE +K+A+ +V R Sbjct: 2 ARHSGLQLQVLTLFRSALRVAKRKDDALALEQGLRNTAYRQGPSYCFVRERFRDDALSVGRSNFAMIEHLLRKGQRDLKMLER--MKSASFASVXR 95
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: A0A1G4MEN0_LACFM (LAFE_0F03752g1_1 n=1 Tax=Lachancea fermentati TaxID=4955 RepID=A0A1G4MEN0_LACFM) HSP 1 Score: 56.6 bits (135), Expect = 3.310e-7 Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 39 MSARLSGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVK 272 MS R+SG+QREV QLYR +RAA K +R+EF Q + + R +F TIEHLLR G+K+L++ P +K Sbjct: 1 MSRRVSGLQREVLQLYRQCIRAAHTKPKDNQP-RFLKYIRSEFG-QYKDLPRKEFSTIEHLLRVGHKRLEMYSAPELK 76 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1579.4032.1 >prot_L-elsbetiae_contig1579.4032.1 ID=prot_L-elsbetiae_contig1579.4032.1|Name=mRNA_L-elsbetiae_contig1579.4032.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp MSARLSGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVback to top mRNA from alignment at L-elsbetiae_contig1579:201..2510- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1579.4032.1 ID=mRNA_L-elsbetiae_contig1579.4032.1|Name=mRNA_L-elsbetiae_contig1579.4032.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2310bp|location=Sequence derived from alignment at L-elsbetiae_contig1579:201..2510- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1579:201..2510- >mRNA_L-elsbetiae_contig1579.4032.1 ID=mRNA_L-elsbetiae_contig1579.4032.1|Name=mRNA_L-elsbetiae_contig1579.4032.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=534bp|location=Sequence derived from alignment at L-elsbetiae_contig1579:201..2510- (Laminarionema elsbetiae ELsaHSoW15)back to top |