mRNA_L-elsbetiae_contig1569.3973.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: D7FIP5_ECTSI (Uncharacterized protein ycf23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP5_ECTSI) HSP 1 Score: 425 bits (1092), Expect = 7.510e-149 Identity = 228/242 (94.21%), Postives = 233/242 (96.28%), Query Frame = 1 Query: 1 MRSTCFIAAAAALSCADAFCFSLTRMSTGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726 MRSTC IAAAAALSCADAFCFS RMS GDVLAPFQAG ALKVISGLNKFDADLVSKVARA AAGGGTHIDIACDPDLV AAKAVSNVPVCVSAVDPELFPACV+AGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTR LLPT PLSVTVPHTLDLDDQV+LAVELEGLGVDVIQTEGKFSLDPSKGG+QGAIERAAPTLAAAHAIS+AVSIPVMAASGLSD+TAPMALAAGARGVGVGSA Sbjct: 1 MRSTCVIAAAAALSCADAFCFSPARMS-GDVLAPFQAGKALKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVDAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRALLPTTPLSVTVPHTLDLDDQVDLAVELEGLGVDVIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISKAVSIPVMAASGLSDVTAPMALAAGARGVGVGSA 241
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: A0A835YK10_9STRA (Uncharacterized protein ycf23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK10_9STRA) HSP 1 Score: 270 bits (690), Expect = 9.070e-88 Identity = 142/216 (65.74%), Postives = 173/216 (80.09%), Query Frame = 1 Query: 82 TGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVS-NVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726 +GD +APF+A ALK+ISG+ FD++LV KVA A AGG TH+DIA DP+LV AK + +V +CVSA++PEL CV AGA+MVELGNFD FYDQG+ F+A+DV+ MT+ TR LLP PLSVT+PH L +D QV LA L+ LGVDVIQTEGK+SLDPS GG+QG IERAAP LAA +AI+RAV IPVM +SG+S++TA MALAAGA GVGVGSA Sbjct: 24 SGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSA 239
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: A0A1Y1HWD8_KLENI (Uncharacterized protein ycf23 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWD8_KLENI) HSP 1 Score: 254 bits (648), Expect = 6.610e-81 Identity = 137/216 (63.43%), Postives = 168/216 (77.78%), Query Frame = 1 Query: 79 STGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726 S DVL PF A KVI+GL F+ + V+++ A GG TH+DIACDP+LV A ++++VPVCVSAV+PELF V AGA MVE+GN+D FY +G TF AE+VL +TR+TR+LLPTIPLSVTVPHTL L DQV+LA LE G D+IQTEG S P++ GV G IE+A+PTLAAA++ISRAVSIPVM ASG+SD+TA MA+AAGA GVGVGSA Sbjct: 64 SRQDVLRPFAEKKAFKVIAGLKNFNRENVAEIVAAAEQGGATHVDIACDPELVKLACSLTSVPVCVSAVEPELFVPAVAAGATMVEIGNYDPFYAEGRTFDAEEVLALTRRTRQLLPTIPLSVTVPHTLPLPDQVHLAELLENAGADIIQTEGGVSSAPTQAGVAGMIEKASPTLAAAYSISRAVSIPVMCASGISDVTASMAIAAGAAGVGVGSA 279
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: L1K0A3_GUITC (Uncharacterized protein ycf23 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K0A3_GUITC) HSP 1 Score: 251 bits (640), Expect = 1.300e-80 Identity = 137/218 (62.84%), Postives = 166/218 (76.15%), Query Frame = 1 Query: 76 MSTGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELL-PTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726 MS GDV+ PF+ ALK+ISGLN FD V+ V RA AGG T +DIACDP LV A+++ NVPVCVS+V E F A V AGA MVE+GN+D FY QG FSAE+VL +T +TR++L +IP+SVTVPHTL LD+QV+LA+ LE G +IQTEG + PS GG+QG IE+AAPTLAA AIS+AV IP MAASG+S ITAP+A+AAGA GVGVGSA Sbjct: 1 MSKGDVMLPFEQRRALKIISGLNNFDEKSVASVVRAANAGGATLVDIACDPKLVQLARSIGNVPVCVSSVVAEDFLAAVKAGANMVEIGNYDSFYAQGRKFSAEEVLAITERTRDILGSSIPVSVTVPHTLPLDEQVSLALALEAAGASIIQTEGGMPMKPSSGGIQGLIEKAAPTLAATAAISKAVEIPTMAASGISAITAPLAIAAGASGVGVGSA 218
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: A0A7S0QE85_9CRYP (Uncharacterized protein ycf23 n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QE85_9CRYP) HSP 1 Score: 250 bits (639), Expect = 7.370e-80 Identity = 136/224 (60.71%), Postives = 172/224 (76.79%), Query Frame = 1 Query: 58 CFSLTRMSTGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELL-PTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726 C S +S VL PFQ +ALK+ISGL F++ VS+V +A +AGG TH+DIAC +LV A++++++P+CVS+VDP+ F A V AGA MVE+GN+D FY +G FSAE+VL +TR+TR LL IPLSVTVPHTL LD QV+LA+ELE G D+IQTEG + PS GG+QG IE+AAPTLAA AI++AV IP MAASG+S +TAP+ALAAGA GVGVGSA Sbjct: 36 CVSQGSVSPNLVLRPFQDKSALKIISGLKNFNSASVSQVVKAASAGGATHVDIACSAELVNLARSLTDLPICVSSVDPKEFVAAVEAGASMVEIGNYDGFYGEGRVFSAEEVLRLTRETRALLGDRIPLSVTVPHTLALDQQVSLAIELEAAGADIIQTEGGMPMKPSTGGLQGLIEKAAPTLAATAAIAKAVRIPTMAASGISYLTAPLALAAGAAGVGVGSA 259
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: U5DGR7_9CHRO (Pyruvate/oxaloacetate carboxyltransferase n=1 Tax=Rubidibacter lacunae KORDI 51-2 TaxID=582515 RepID=U5DGR7_9CHRO) HSP 1 Score: 248 bits (632), Expect = 2.120e-79 Identity = 132/210 (62.86%), Postives = 159/210 (75.71%), Query Frame = 1 Query: 97 APFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726 A F NALK+ISGLN F+ D V+ VARA AAGG T +DIA P+LV A+ ++P+C SAV+PE F A V AGA+++E+GNFDCFY QG F AE+VL +TR TR LLP + LSVTVPH L LD QV LA +L G DVIQTEG S P+ GGV GAIE+AAPTLAAAH ISRAV +PV+ ASGL+D+TAP+A+AAGA G+GVGSA Sbjct: 8 AAFARRNALKIISGLNNFNGDRVAAVARAAAAGGATFVDIAASPELVRRARQACDLPICTSAVEPEAFVAAVAAGADLIEIGNFDCFYAQGRRFEAEEVLALTRATRALLPQVMLSVTVPHVLPLDAQVQLAEDLVRAGADVIQTEGGTSSQPAHGGVLGAIEKAAPTLAAAHCISRAVDVPVLCASGLTDVTAPLAIAAGAAGIGVGSA 217
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: A0A166CRX2_DAUCS (Uncharacterized protein ycf23 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166CRX2_DAUCS) HSP 1 Score: 249 bits (635), Expect = 5.230e-79 Identity = 128/212 (60.38%), Postives = 164/212 (77.36%), Query Frame = 1 Query: 91 VLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726 VL F A A+K+ISGL FD D V+ V A GG TH+DIACDPDLV A +++++P+CVS+VDP FPA + AGA MVE+GN+D FY++G+TFS E++L +TR+T+++LP++ LSVTVPHTL L DQ+ LA +LE GVDVIQTEG P+K G+ G IE+A PTLAAA++ISRAV IPVM +SGLS +TAPMA+ AGA GVGVGSA Sbjct: 60 VLKDFHAKKAIKIISGLQNFDKDNVASVVTAADKGGATHVDIACDPDLVKLATSLTSLPICVSSVDPAAFPAAIEAGAVMVEIGNYDSFYEKGVTFSPEEILNLTRETKKILPSVALSVTVPHTLSLPDQIKLAEQLEQEGVDVIQTEGGKYSSPTKSGILGLIEKATPTLAAAYSISRAVKIPVMCSSGLSAVTAPMAITAGAAGVGVGSA 271
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: A0A6P6UF53_COFAR (Uncharacterized protein ycf23 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6UF53_COFAR) HSP 1 Score: 244 bits (624), Expect = 2.640e-77 Identity = 127/212 (59.91%), Postives = 159/212 (75.00%), Query Frame = 1 Query: 91 VLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726 VL F NALK+ISGL F+ + V+ V A GG TH+DIACDPDLV A +++++PVCVS+VDP FP V AGA MVE+GN+D FY+ GLTFS E +L++ ++TR +LP++ LSVTVPH+L L DQV LA +LE GVD+IQTEG PSK G+ G IE+A PTLAAA++IS AV IPVM +SGLS +TAPMA+ AGA GVGVGSA Sbjct: 63 VLRDFHERNALKIISGLQNFNRENVASVVTAAEKGGATHVDIACDPDLVKLATSLTSIPVCVSSVDPAAFPIAVEAGASMVEIGNYDSFYEMGLTFSPEQILDLAKETRRILPSVTLSVTVPHSLSLPDQVKLAEQLENEGVDIIQTEGGKCSSPSKAGILGLIEKATPTLAAAYSISHAVKIPVMCSSGLSAVTAPMAITAGAAGVGVGSA 274
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: A0A3M9ZCT6_9CYAN (DUF561 domain-containing protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A3M9ZCT6_9CYAN) HSP 1 Score: 242 bits (618), Expect = 2.730e-77 Identity = 132/204 (64.71%), Postives = 156/204 (76.47%), Query Frame = 1 Query: 115 NALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726 NALKVISGL FDA V+ V RA GG T +DIA DPDLV +K ++ +PVCVSAV+P+ F A V AGA+++E+GNFD FY QG F A +VLE+TR+TR LLP I LSVTVPH L+LD QV LA EL G D+IQTEG S P+ G G IE+AAPTLAAAHAISRAVS+PV+ ASGLSD+TAPMA+AAGA G+GVGSA Sbjct: 15 NALKVISGLTNFDAVRVAAVVRAADRGGATFVDIAADPDLVRLSKQLTQLPVCVSAVEPQQFVAAVAAGADLIEIGNFDAFYAQGKRFEAAEVLELTRQTRALLPNIMLSVTVPHILELDQQVQLAEELVQAGADLIQTEGGTSSQPTHAGTLGLIEKAAPTLAAAHAISRAVSVPVLCASGLSDVTAPMAIAAGAAGIGVGSA 218
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: K9TPG0_9CYAN (Thiamine monophosphate synthase n=2 Tax=Oscillatoriaceae TaxID=1892254 RepID=K9TPG0_9CYAN) HSP 1 Score: 242 bits (618), Expect = 2.910e-77 Identity = 130/208 (62.50%), Postives = 160/208 (76.92%), Query Frame = 1 Query: 103 FQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726 FQ G ALK+I+GL FDAD V+ V RA GG T +DIA DP LV AK ++++P+CVSAV+PE F CV AGA+++E+GNFD FY +G F A +VL++TR+TR LLP I LS+TVPH L+LD QV+LA EL G D+IQTEG S +P G+ GAIE+AAPTLAAA AISRAVS+PV+ ASG+S ITAPMA+AAGA GVGVGSA Sbjct: 11 FQQGRALKIITGLTNFDADKVATVVRAADRGGATFLDIAADPALVKLAKQLTHLPICVSAVEPEKFLPCVEAGADLIEIGNFDAFYARGRRFEAAEVLQLTRETRALLPNIVLSITVPHILELDQQVDLAEELVKAGADIIQTEGGTSSNPVHPGILGAIEKAAPTLAAASAISRAVSVPVLCASGISTITAPMAIAAGAAGVGVGSA 218 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1569.3973.1 >prot_L-elsbetiae_contig1569.3973.1 ID=prot_L-elsbetiae_contig1569.3973.1|Name=mRNA_L-elsbetiae_contig1569.3973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=242bp MRSTCFIAAAAALSCADAFCFSLTRMSTGDVLAPFQAGNALKVISGLNKFback to top mRNA from alignment at L-elsbetiae_contig1569:401..3859- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1569.3973.1 ID=mRNA_L-elsbetiae_contig1569.3973.1|Name=mRNA_L-elsbetiae_contig1569.3973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3459bp|location=Sequence derived from alignment at L-elsbetiae_contig1569:401..3859- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1569:401..3859- >mRNA_L-elsbetiae_contig1569.3973.1 ID=mRNA_L-elsbetiae_contig1569.3973.1|Name=mRNA_L-elsbetiae_contig1569.3973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1452bp|location=Sequence derived from alignment at L-elsbetiae_contig1569:401..3859- (Laminarionema elsbetiae ELsaHSoW15)back to top |