mRNA_L-elsbetiae_contig1569.3973.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1569.3973.1
Unique NamemRNA_L-elsbetiae_contig1569.3973.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: D7FIP5_ECTSI (Uncharacterized protein ycf23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP5_ECTSI)

HSP 1 Score: 425 bits (1092), Expect = 7.510e-149
Identity = 228/242 (94.21%), Postives = 233/242 (96.28%), Query Frame = 1
Query:    1 MRSTCFIAAAAALSCADAFCFSLTRMSTGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726
            MRSTC IAAAAALSCADAFCFS  RMS GDVLAPFQAG ALKVISGLNKFDADLVSKVARA AAGGGTHIDIACDPDLV AAKAVSNVPVCVSAVDPELFPACV+AGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTR LLPT PLSVTVPHTLDLDDQV+LAVELEGLGVDVIQTEGKFSLDPSKGG+QGAIERAAPTLAAAHAIS+AVSIPVMAASGLSD+TAPMALAAGARGVGVGSA
Sbjct:    1 MRSTCVIAAAAALSCADAFCFSPARMS-GDVLAPFQAGKALKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVDAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRALLPTTPLSVTVPHTLDLDDQVDLAVELEGLGVDVIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISKAVSIPVMAASGLSDVTAPMALAAGARGVGVGSA 241          
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: A0A835YK10_9STRA (Uncharacterized protein ycf23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK10_9STRA)

HSP 1 Score: 270 bits (690), Expect = 9.070e-88
Identity = 142/216 (65.74%), Postives = 173/216 (80.09%), Query Frame = 1
Query:   82 TGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVS-NVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726
            +GD +APF+A  ALK+ISG+  FD++LV KVA A  AGG TH+DIA DP+LV  AK  + +V +CVSA++PEL   CV AGA+MVELGNFD FYDQG+ F+A+DV+ MT+ TR LLP  PLSVT+PH L +D QV LA  L+ LGVDVIQTEGK+SLDPS GG+QG IERAAP LAA +AI+RAV IPVM +SG+S++TA MALAAGA GVGVGSA
Sbjct:   24 SGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSA 239          
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: A0A1Y1HWD8_KLENI (Uncharacterized protein ycf23 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWD8_KLENI)

HSP 1 Score: 254 bits (648), Expect = 6.610e-81
Identity = 137/216 (63.43%), Postives = 168/216 (77.78%), Query Frame = 1
Query:   79 STGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726
            S  DVL PF    A KVI+GL  F+ + V+++  A   GG TH+DIACDP+LV  A ++++VPVCVSAV+PELF   V AGA MVE+GN+D FY +G TF AE+VL +TR+TR+LLPTIPLSVTVPHTL L DQV+LA  LE  G D+IQTEG  S  P++ GV G IE+A+PTLAAA++ISRAVSIPVM ASG+SD+TA MA+AAGA GVGVGSA
Sbjct:   64 SRQDVLRPFAEKKAFKVIAGLKNFNRENVAEIVAAAEQGGATHVDIACDPELVKLACSLTSVPVCVSAVEPELFVPAVAAGATMVEIGNYDPFYAEGRTFDAEEVLALTRRTRQLLPTIPLSVTVPHTLPLPDQVHLAELLENAGADIIQTEGGVSSAPTQAGVAGMIEKASPTLAAAYSISRAVSIPVMCASGISDVTASMAIAAGAAGVGVGSA 279          
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: L1K0A3_GUITC (Uncharacterized protein ycf23 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K0A3_GUITC)

HSP 1 Score: 251 bits (640), Expect = 1.300e-80
Identity = 137/218 (62.84%), Postives = 166/218 (76.15%), Query Frame = 1
Query:   76 MSTGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELL-PTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726
            MS GDV+ PF+   ALK+ISGLN FD   V+ V RA  AGG T +DIACDP LV  A+++ NVPVCVS+V  E F A V AGA MVE+GN+D FY QG  FSAE+VL +T +TR++L  +IP+SVTVPHTL LD+QV+LA+ LE  G  +IQTEG   + PS GG+QG IE+AAPTLAA  AIS+AV IP MAASG+S ITAP+A+AAGA GVGVGSA
Sbjct:    1 MSKGDVMLPFEQRRALKIISGLNNFDEKSVASVVRAANAGGATLVDIACDPKLVQLARSIGNVPVCVSSVVAEDFLAAVKAGANMVEIGNYDSFYAQGRKFSAEEVLAITERTRDILGSSIPVSVTVPHTLPLDEQVSLALALEAAGASIIQTEGGMPMKPSSGGIQGLIEKAAPTLAATAAISKAVEIPTMAASGISAITAPLAIAAGASGVGVGSA 218          
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: A0A7S0QE85_9CRYP (Uncharacterized protein ycf23 n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QE85_9CRYP)

HSP 1 Score: 250 bits (639), Expect = 7.370e-80
Identity = 136/224 (60.71%), Postives = 172/224 (76.79%), Query Frame = 1
Query:   58 CFSLTRMSTGDVLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELL-PTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726
            C S   +S   VL PFQ  +ALK+ISGL  F++  VS+V +A +AGG TH+DIAC  +LV  A++++++P+CVS+VDP+ F A V AGA MVE+GN+D FY +G  FSAE+VL +TR+TR LL   IPLSVTVPHTL LD QV+LA+ELE  G D+IQTEG   + PS GG+QG IE+AAPTLAA  AI++AV IP MAASG+S +TAP+ALAAGA GVGVGSA
Sbjct:   36 CVSQGSVSPNLVLRPFQDKSALKIISGLKNFNSASVSQVVKAASAGGATHVDIACSAELVNLARSLTDLPICVSSVDPKEFVAAVEAGASMVEIGNYDGFYGEGRVFSAEEVLRLTRETRALLGDRIPLSVTVPHTLALDQQVSLAIELEAAGADIIQTEGGMPMKPSTGGLQGLIEKAAPTLAATAAIAKAVRIPTMAASGISYLTAPLALAAGAAGVGVGSA 259          
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: U5DGR7_9CHRO (Pyruvate/oxaloacetate carboxyltransferase n=1 Tax=Rubidibacter lacunae KORDI 51-2 TaxID=582515 RepID=U5DGR7_9CHRO)

HSP 1 Score: 248 bits (632), Expect = 2.120e-79
Identity = 132/210 (62.86%), Postives = 159/210 (75.71%), Query Frame = 1
Query:   97 APFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726
            A F   NALK+ISGLN F+ D V+ VARA AAGG T +DIA  P+LV  A+   ++P+C SAV+PE F A V AGA+++E+GNFDCFY QG  F AE+VL +TR TR LLP + LSVTVPH L LD QV LA +L   G DVIQTEG  S  P+ GGV GAIE+AAPTLAAAH ISRAV +PV+ ASGL+D+TAP+A+AAGA G+GVGSA
Sbjct:    8 AAFARRNALKIISGLNNFNGDRVAAVARAAAAGGATFVDIAASPELVRRARQACDLPICTSAVEPEAFVAAVAAGADLIEIGNFDCFYAQGRRFEAEEVLALTRATRALLPQVMLSVTVPHVLPLDAQVQLAEDLVRAGADVIQTEGGTSSQPAHGGVLGAIEKAAPTLAAAHCISRAVDVPVLCASGLTDVTAPLAIAAGAAGIGVGSA 217          
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: A0A166CRX2_DAUCS (Uncharacterized protein ycf23 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166CRX2_DAUCS)

HSP 1 Score: 249 bits (635), Expect = 5.230e-79
Identity = 128/212 (60.38%), Postives = 164/212 (77.36%), Query Frame = 1
Query:   91 VLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726
            VL  F A  A+K+ISGL  FD D V+ V  A   GG TH+DIACDPDLV  A +++++P+CVS+VDP  FPA + AGA MVE+GN+D FY++G+TFS E++L +TR+T+++LP++ LSVTVPHTL L DQ+ LA +LE  GVDVIQTEG     P+K G+ G IE+A PTLAAA++ISRAV IPVM +SGLS +TAPMA+ AGA GVGVGSA
Sbjct:   60 VLKDFHAKKAIKIISGLQNFDKDNVASVVTAADKGGATHVDIACDPDLVKLATSLTSLPICVSSVDPAAFPAAIEAGAVMVEIGNYDSFYEKGVTFSPEEILNLTRETKKILPSVALSVTVPHTLSLPDQIKLAEQLEQEGVDVIQTEGGKYSSPTKSGILGLIEKATPTLAAAYSISRAVKIPVMCSSGLSAVTAPMAITAGAAGVGVGSA 271          
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: A0A6P6UF53_COFAR (Uncharacterized protein ycf23 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6UF53_COFAR)

HSP 1 Score: 244 bits (624), Expect = 2.640e-77
Identity = 127/212 (59.91%), Postives = 159/212 (75.00%), Query Frame = 1
Query:   91 VLAPFQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726
            VL  F   NALK+ISGL  F+ + V+ V  A   GG TH+DIACDPDLV  A +++++PVCVS+VDP  FP  V AGA MVE+GN+D FY+ GLTFS E +L++ ++TR +LP++ LSVTVPH+L L DQV LA +LE  GVD+IQTEG     PSK G+ G IE+A PTLAAA++IS AV IPVM +SGLS +TAPMA+ AGA GVGVGSA
Sbjct:   63 VLRDFHERNALKIISGLQNFNRENVASVVTAAEKGGATHVDIACDPDLVKLATSLTSIPVCVSSVDPAAFPIAVEAGASMVEIGNYDSFYEMGLTFSPEQILDLAKETRRILPSVTLSVTVPHSLSLPDQVKLAEQLENEGVDIIQTEGGKCSSPSKAGILGLIEKATPTLAAAYSISHAVKIPVMCSSGLSAVTAPMAITAGAAGVGVGSA 274          
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: A0A3M9ZCT6_9CYAN (DUF561 domain-containing protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A3M9ZCT6_9CYAN)

HSP 1 Score: 242 bits (618), Expect = 2.730e-77
Identity = 132/204 (64.71%), Postives = 156/204 (76.47%), Query Frame = 1
Query:  115 NALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726
            NALKVISGL  FDA  V+ V RA   GG T +DIA DPDLV  +K ++ +PVCVSAV+P+ F A V AGA+++E+GNFD FY QG  F A +VLE+TR+TR LLP I LSVTVPH L+LD QV LA EL   G D+IQTEG  S  P+  G  G IE+AAPTLAAAHAISRAVS+PV+ ASGLSD+TAPMA+AAGA G+GVGSA
Sbjct:   15 NALKVISGLTNFDAVRVAAVVRAADRGGATFVDIAADPDLVRLSKQLTQLPVCVSAVEPQQFVAAVAAGADLIEIGNFDAFYAQGKRFEAAEVLELTRQTRALLPNIMLSVTVPHILELDQQVQLAEELVQAGADLIQTEGGTSSQPTHAGTLGLIEKAAPTLAAAHAISRAVSVPVLCASGLSDVTAPMAIAAGAAGIGVGSA 218          
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Match: K9TPG0_9CYAN (Thiamine monophosphate synthase n=2 Tax=Oscillatoriaceae TaxID=1892254 RepID=K9TPG0_9CYAN)

HSP 1 Score: 242 bits (618), Expect = 2.910e-77
Identity = 130/208 (62.50%), Postives = 160/208 (76.92%), Query Frame = 1
Query:  103 FQAGNALKVISGLNKFDADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELFPACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVTVPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA 726
            FQ G ALK+I+GL  FDAD V+ V RA   GG T +DIA DP LV  AK ++++P+CVSAV+PE F  CV AGA+++E+GNFD FY +G  F A +VL++TR+TR LLP I LS+TVPH L+LD QV+LA EL   G D+IQTEG  S +P   G+ GAIE+AAPTLAAA AISRAVS+PV+ ASG+S ITAPMA+AAGA GVGVGSA
Sbjct:   11 FQQGRALKIITGLTNFDADKVATVVRAADRGGATFLDIAADPALVKLAKQLTHLPICVSAVEPEKFLPCVEAGADLIEIGNFDAFYARGRRFEAAEVLQLTRETRALLPNIVLSITVPHILELDQQVDLAEELVKAGADIIQTEGGTSSNPVHPGILGAIEKAAPTLAAASAISRAVSVPVLCASGISTITAPMAIAAGAAGVGVGSA 218          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1569.3973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIP5_ECTSI7.510e-14994.21Uncharacterized protein ycf23 n=2 Tax=Ectocarpus T... [more]
A0A835YK10_9STRA9.070e-8865.74Uncharacterized protein ycf23 n=1 Tax=Tribonema mi... [more]
A0A1Y1HWD8_KLENI6.610e-8163.43Uncharacterized protein ycf23 n=1 Tax=Klebsormidiu... [more]
L1K0A3_GUITC1.300e-8062.84Uncharacterized protein ycf23 n=2 Tax=Guillardia t... [more]
A0A7S0QE85_9CRYP7.370e-8060.71Uncharacterized protein ycf23 n=1 Tax=Cryptomonas ... [more]
U5DGR7_9CHRO2.120e-7962.86Pyruvate/oxaloacetate carboxyltransferase n=1 Tax=... [more]
A0A166CRX2_DAUCS5.230e-7960.38Uncharacterized protein ycf23 n=1 Tax=Daucus carot... [more]
A0A6P6UF53_COFAR2.640e-7759.91Uncharacterized protein ycf23 n=3 Tax=Coffea TaxID... [more]
A0A3M9ZCT6_9CYAN2.730e-7764.71DUF561 domain-containing protein n=2 Tax=Pseudanab... [more]
K9TPG0_9CYAN2.910e-7762.50Thiamine monophosphate synthase n=2 Tax=Oscillator... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1569contigL-elsbetiae_contig1569:401..3859 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score427.2
Seed ortholog evalue5.2e-117
Seed eggNOG ortholog2880.D7FIP5
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Protein of unknown function (DUF561)
EggNOG OGs28MV1@1,2QUDA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionAldolase-type TIM barrel
Ec32 orthologEc-27_000540.1
Exons6
Model size726
Cds size726
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1569.3973.1prot_L-elsbetiae_contig1569.3973.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1569 401..3859 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815643.2880864-CDS-L-elsbetiae_contig1569:400..5661622815643.2880864-CDS-L-elsbetiae_contig1569:400..566Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 401..566 -
1691683009.958125-CDS-L-elsbetiae_contig1569:400..5661691683009.958125-CDS-L-elsbetiae_contig1569:400..566Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 401..566 -
1622815643.2984083-CDS-L-elsbetiae_contig1569:1321..14011622815643.2984083-CDS-L-elsbetiae_contig1569:1321..1401Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 1322..1401 -
1691683009.9715867-CDS-L-elsbetiae_contig1569:1321..14011691683009.9715867-CDS-L-elsbetiae_contig1569:1321..1401Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 1322..1401 -
1622815643.3118784-CDS-L-elsbetiae_contig1569:2076..21901622815643.3118784-CDS-L-elsbetiae_contig1569:2076..2190Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 2077..2190 -
1691683009.9806368-CDS-L-elsbetiae_contig1569:2076..21901691683009.9806368-CDS-L-elsbetiae_contig1569:2076..2190Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 2077..2190 -
1622815643.3227673-CDS-L-elsbetiae_contig1569:2646..27451622815643.3227673-CDS-L-elsbetiae_contig1569:2646..2745Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 2647..2745 -
1691683009.9900677-CDS-L-elsbetiae_contig1569:2646..27451691683009.9900677-CDS-L-elsbetiae_contig1569:2646..2745Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 2647..2745 -
1622815643.3368456-CDS-L-elsbetiae_contig1569:3105..32461622815643.3368456-CDS-L-elsbetiae_contig1569:3105..3246Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 3106..3246 -
1691683009.999841-CDS-L-elsbetiae_contig1569:3105..32461691683009.999841-CDS-L-elsbetiae_contig1569:3105..3246Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 3106..3246 -
1622815643.3518353-CDS-L-elsbetiae_contig1569:3733..38591622815643.3518353-CDS-L-elsbetiae_contig1569:3733..3859Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 3734..3859 -
1691683010.0098915-CDS-L-elsbetiae_contig1569:3733..38591691683010.0098915-CDS-L-elsbetiae_contig1569:3733..3859Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 3734..3859 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1569.3973.1

>prot_L-elsbetiae_contig1569.3973.1 ID=prot_L-elsbetiae_contig1569.3973.1|Name=mRNA_L-elsbetiae_contig1569.3973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=242bp
MRSTCFIAAAAALSCADAFCFSLTRMSTGDVLAPFQAGNALKVISGLNKF
DADLVSKVARATAAGGGTHIDIACDPDLVGAAKAVSNVPVCVSAVDPELF
PACVNAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRELLPTIPLSVT
VPHTLDLDDQVNLAVELEGLGVDVIQTEGKFSLDPSKGGVQGAIERAAPT
LAAAHAISRAVSIPVMAASGLSDITAPMALAAGARGVGVGSA
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mRNA from alignment at L-elsbetiae_contig1569:401..3859-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1569.3973.1 ID=mRNA_L-elsbetiae_contig1569.3973.1|Name=mRNA_L-elsbetiae_contig1569.3973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3459bp|location=Sequence derived from alignment at L-elsbetiae_contig1569:401..3859- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGGTCTACCTGCTTCATTGCCGCGGCCGCGGCTCTCTCCTGCGCGGA TGCTTTCTGCTTCTCCCTGACGCGGATGTCGACGGGCGATGTTCTGGCGC CGTTCCAAGCCGGTAACGCCCTCAAGGTCTGGTAGTCTAATTGAGCAATA GTCGCGACCCTGCGGGAAGCTCTTATTGCCCTGGGCCCTGCTCGACTTTG CCAGCTTTTCAGTCCAGTTCAGCACTACTGATGAACCACAGAACGCCCTC CTTGCGATGTCACTGGTTGTCCGCTTCCTGGATATACCTCCGTCAAACGG GTAGTACATAGAGTTCCCCGCATTACCCCGTCCTCGACAACGGCCGGAGC GCTAGCGGCACCCAAAACGCTATTACTTCGGCAGGCTTGCTTCGACCGCG GGCGGGCGTATCGGTGCAGCACGACACACTGCTATGGCTTAACTTTGCGC CTACACTTCCCCGCCCGTTTCCTGGCAACACGTGTAGATGGTGTATTTTT TCGCCAGAGCTGCAGGAACTGACGTGATCGAAAGGCTCTAGCGTGCAGCC CCAGTTCCACCCCCCGATGAAACAAGCACTTGGATGTTCGCTGTATTGTA TCGTACTAAGCAGGTGATTTCGGGGCTGAACAAGTTCGACGCCGACCTAG TGTCCAAGGTGGCCAGGGCAACGGCCGCGGGAGGGGGGACCCACATCGAC ATCGCGTGCGACCCTGACCTCGTAGGGGCGGCCAAGGCCGTGTCCAACGT ACCGGTGAGTGTGTGTGTGAAAGAGAGAGGGGGGGGGGGGCAGGTTGTCT GCTGTTTGTGCTGCGGCTGTTGGAGGCGGAACGAGTGAACAGGCAAGGGG GCACGGTAATAGATCATACGCACAGCATGGGCTACATACGTACAGGAAGG GCTAAATGATCAATGCGGGGCAGCGGGCAGATGCCCCCTCCCTCCGAGTT GCTCCTCCGTGCACATCATCGGCCGGGCGGCTTTGGTCGAGACCGCCAAG ATCAGTTTTCCGTGATTTTGCGTGCTTTGGGCAAACGTCTGCAACTCGTG CTGGGGCGTGGCGTTGCGGTAACACCCCGACCCCGCCCCCCTGCCCCGAC CAACACCAACAAAGGTGTGCGTATCGGCGGTGGACCCCGAGCTTTTCCCT GCTTGCGTCAACGCCGGCGCTGAGATGGTGGAGCTCGGAAACTTCGATTG CTTTTACGACCAGGTAAAATGTGCTTCGAAGGACTCCTATGTAACCAGAG TCCTGTTTTCATGCAGTTTTTTGTGTGTCCAAGTGTGGCCCTTGAGCCTC ACGACTTTCAGCAGCGGGTTATGCCAAAATGCAAAGGTCCAACACCAGCA GGACAGAAGCGTCATACACTTGTCGATTTTTTTTCCGATTGCAATTTTCC CCTAAATTCTAATTGTATACTGCACCCGGAACGATACTAGAATAATACGC GTTCCTAGCCCATGGCAATGAAGGTTGTTGGCACTAACATTTGCGATTTT TCAGCACCGTCTCACTCAAATGGACGGGAACAGTTTTGTATTGGGGTCAT ATTTTTGCTGCACAATGCACAATGGCTCAATTGTCTGAAATATGGACACC TACCCACCTACCGACCCACCCTTTGTCTTGTCCCGATACCAAACGATACG ATACGCGAACATGCGACAGGGGCTTACGTTTTCCGCCGAAGACGTGCTGG AGATGACGCGCAAGACGAGAGAGCTGCTGCCGACCATCCCGCTCTCGGTC ACCGTGCCGCACACCCTCGACCTAGACGACCAGGTAATTAAACACGAGAG CAAAATATGAGACAGAGGCCGTGCTGAAAACCAAGGATGTAAGCCGAAGC CTTGATGATGCGATAAGGGTACACGCGCCAACGTGGGTCCTTCTCCTTCA TTTTTTGCGTGGGTTATTTCAGTTGGCCCGGCTGAACAAAGGAACGGGAA ATTAACCGGGTAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGAGGAACGCCCCACGGGGGGGCCCAAACCCCGGGCGGTTTT CCCCNNNNNNNNNNGTGTGGGTGCTCGTTGTTGGTGTTTTTTTTTTTTTT TTTTTGTTGTTGGGGTTGGGGGGGGCGGGGGGAGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGAGCGAGTTGAGAGGCG GTGCTGCGGGCATGAGCACCACTGAGCAGGCTCATCTCCGCAGACGTTTT CCCCACGACAAGCCGTGATGCCGCTGCTGCGGCTGCGGCTGCTATTGCTG CCTGTATTCGTGCTAAATGGCACTTGTGTGTTTCAATTTCAAGACACTTT GTCTTTGGGTTCTCGACGCGGTGTTTCTCCTGCTCGTGACCCCGCTCGAC ACGCGTCCTTTTCCCCCTCTTTTCGACCCCGGCCGTCGCCCTGAAATAAA AACAACAGGTAAACCTCGCGGTGGAGCTGGAAGGTCTTGGCGTGGACGTT ATCCAGACCGAAGGGAAGTTCAGCCTCGACCCATCCAAGTGAGCATGCCG GCGGAGGTCGTCATGATAATCGCGCAATGTTTTGCTGCGCACTGCATGCG CAATGCAACGCCCCCGAGATGTGCAGCAGAAGAGATGCCGATGTTATATT GAGCTTCAACGGCAATCAAAATCGCATTATAACGCACCCGGCCAAGTGTG TGGTGATCAGACCTACGACTGTGTACAAGGACCGTAAAGCGATTGACTCC GTGTAGAATATTAAGCACGGCGTTCTCCGTTACAAGAGGACAAGAGAAGC GGCGAATGCCCCACGATCGTGAAAGGTGTGGTATGGAATAGCGAGACACG ACGTTTCTTGTTCGACCAAAATCCGATCGAGTTTTTCATGGGATCAAATG CATGGCAAAGTCACGTGTGCCCTGGGAACGGGACGAATGAAGGCGTGGGG GCTACGTGGTTGCGTGGTGTCAGAGTGGGTGGGAGTCTGCTTGGAATCAG CTCAAGTGTTAGGAGGGGCGCCGACTGAGTGTAAAGTTTTTGGGACAAAA TGGCCACTTCTCAGTTTCGCGTTGTTGAAGGGCCCAGGCTTTGGTCAGGT TCTTGAACCGCAAAAAATATTTACGCCCCCCCCCCAAAGTCCTTTCGCAC ATGGTCTTACATGCGCTCTCCACTGGGTACGTGGAGGCTAAGTCCTCTTT CGCCGATGTCGCCTATCGTCTCTTCCTTACTTGTCGTCCAACTTTGTCCA CTCGTTCTAAGGCTTGCCTGCTTTTTTGTATTGTTTTTGCCAGGGGTGGA GTTCAGGGAGCCATCGAGCGCGCCGCGCCGACGCTTGCTGCCGCCCACGC CATCTCTAGGGCGGTGTCTATCCCCGTCATGGCCGCTTCCGGCCTGAGCG ACATCACTGCGCCGATGGCCCTGGCTGCAGGCGCCCGCGGTGTTGGTGTT GGATCCGCA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1569:401..3859-

>mRNA_L-elsbetiae_contig1569.3973.1 ID=mRNA_L-elsbetiae_contig1569.3973.1|Name=mRNA_L-elsbetiae_contig1569.3973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1452bp|location=Sequence derived from alignment at L-elsbetiae_contig1569:401..3859- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGGTCTACCTGCTTCATTGCCGCGGCCGCGGCTCTCTCCTGCGCGGA
TGCTTTCTGCTTCTCCCTGACGCGGATGTCGACGGGCGATGTTCTGGCGC
CGTTCCAAGCCGGTAACGCCCTCAAGATGAGGTCTACCTGCTTCATTGCC
GCGGCCGCGGCTCTCTCCTGCGCGGATGCTTTCTGCTTCTCCCTGACGCG
GATGTCGACGGGCGATGTTCTGGCGCCGTTCCAAGCCGGTAACGCCCTCA
AGGTGATTTCGGGGCTGAACAAGTTCGACGCCGACCTAGTGTCCAAGGTG
GCCAGGGCAACGGCCGCGGGAGGGGGGACCCACATCGACATCGCGTGCGA
CCCTGACCTCGTAGGGGCGGCCAAGGCCGTGTCCAACGTACCGGTGATTT
CGGGGCTGAACAAGTTCGACGCCGACCTAGTGTCCAAGGTGGCCAGGGCA
ACGGCCGCGGGAGGGGGGACCCACATCGACATCGCGTGCGACCCTGACCT
CGTAGGGGCGGCCAAGGCCGTGTCCAACGTACCGGTGTGCGTATCGGCGG
TGGACCCCGAGCTTTTCCCTGCTTGCGTCAACGCCGGCGCTGAGATGGTG
GAGCTCGGAAACTTCGATTGCTTTTACGACCAGGTGTGCGTATCGGCGGT
GGACCCCGAGCTTTTCCCTGCTTGCGTCAACGCCGGCGCTGAGATGGTGG
AGCTCGGAAACTTCGATTGCTTTTACGACCAGGGGCTTACGTTTTCCGCC
GAAGACGTGCTGGAGATGACGCGCAAGACGAGAGAGCTGCTGCCGACCAT
CCCGCTCTCGGTCACCGTGCCGCACACCCTCGACCTAGACGACCAGGGGC
TTACGTTTTCCGCCGAAGACGTGCTGGAGATGACGCGCAAGACGAGAGAG
CTGCTGCCGACCATCCCGCTCTCGGTCACCGTGCCGCACACCCTCGACCT
AGACGACCAGGTAAACCTCGCGGTGGAGCTGGAAGGTCTTGGCGTGGACG
TTATCCAGACCGAAGGGAAGTTCAGCCTCGACCCATCCAAGTAAACCTCG
CGGTGGAGCTGGAAGGTCTTGGCGTGGACGTTATCCAGACCGAAGGGAAG
TTCAGCCTCGACCCATCCAAGGGTGGAGTTCAGGGAGCCATCGAGCGCGC
CGCGCCGACGCTTGCTGCCGCCCACGCCATCTCTAGGGCGGTGTCTATCC
CCGTCATGGCCGCTTCCGGCCTGAGCGACATCACTGCGCCGATGGCCCTG
GCTGCAGGCGCCCGCGGTGTTGGTGTTGGATCCGCAGGGTGGAGTTCAGG
GAGCCATCGAGCGCGCCGCGCCGACGCTTGCTGCCGCCCACGCCATCTCT
AGGGCGGTGTCTATCCCCGTCATGGCCGCTTCCGGCCTGAGCGACATCAC
TGCGCCGATGGCCCTGGCTGCAGGCGCCCGCGGTGTTGGTGTTGGATCCG
CA
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