mRNA_L-elsbetiae_contig1529.3752.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1529.3752.1 vs. uniprot
Match: D7G879_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G879_ECTSI) HSP 1 Score: 149 bits (375), Expect = 1.460e-40 Identity = 80/86 (93.02%), Postives = 82/86 (95.35%), Query Frame = 1 Query: 1 VWQKTTKSAVSGRSAKIGDLLKNTGATIVSGEGNTPGKRALANAEMMHQAAAMITNDRQQEKESMAEFIAKKREMFLVQMSLDTKR 258 VWQKTTKSAVSGRSAKIGDLLKNTGA IV GE +TPGKRALANAEMMHQAA MITNDRQQEKESMAEFI+KKREMFLVQMSLDTKR Sbjct: 51 VWQKTTKSAVSGRSAKIGDLLKNTGAAIVGGEDSTPGKRALANAEMMHQAATMITNDRQQEKESMAEFISKKREMFLVQMSLDTKR 136
BLAST of mRNA_L-elsbetiae_contig1529.3752.1 vs. uniprot
Match: A0A7S1CA91_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA91_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.350e-13 Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 1 VWQKTTKSAVSGRSAKIGDLLKNTGATIVSGEGNTPGKRALANAEMMHQAAAMITNDRQQEKESMAEFIAKKREMFLVQMSLDTKR 258 VW+KTT+S+ G++ +I DLL A +G +T G A A A I+NDR++EKE+MA+FIAKKREMFLVQMSLDTKR Sbjct: 46 VWEKTTQSSRMGKTRQISDLLPPADAGASAGARHTRGLVAAA--------TAAISNDRRREKENMADFIAKKREMFLVQMSLDTKR 123
BLAST of mRNA_L-elsbetiae_contig1529.3752.1 vs. uniprot
Match: F0Y2D2_AURAN (DUF4200 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2D2_AURAN) HSP 1 Score: 70.1 bits (170), Expect = 3.890e-12 Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 1 VWQKTTKSAVSGRSAKIGDLLKNTGATIVSGEGNTPGKRALANAEMMHQAAAMITNDRQQEKESMAEFIAKKREMFLVQMSLDTKR 258 VWQKTT + S ++ +L+ G EG K A + +++A +++ N+R+QEKE+MAEFIAKKREMFLVQMSLDTKR Sbjct: 42 VWQKTTGGSRVAGSVRLKELIGGDGR-----EGAAASKSARQTKDAVNEARSIVVNERRQEKENMAEFIAKKREMFLVQMSLDTKR 122
BLAST of mRNA_L-elsbetiae_contig1529.3752.1 vs. uniprot
Match: A0A7S2W9L4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9L4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 4.700e-11 Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 1 VWQKTTKSAVSGRSAKIGDLLKNTGATIVSGEGNTPGKRALANAEMMHQAAAMITNDRQQEKESMAEFIAKKREMFLVQMSLDTKR 258 VW+K T SAV+GR+++I DL+ A + +AL A +++ +R+ EKE+MAEFIAKKREMFLVQMSLDTKR Sbjct: 54 VWEKMTGSAVTGRASRIADLIDEGAAGRSHDSRRSHKTKALVTA-----GKSVVGTERRPEKENMAEFIAKKREMFLVQMSLDTKR 134
BLAST of mRNA_L-elsbetiae_contig1529.3752.1 vs. uniprot
Match: H3GEG8_PHYRM (DUF4200 domain-containing protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3GEG8_PHYRM) HSP 1 Score: 60.1 bits (144), Expect = 1.300e-8 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 1 VWQKTTKSAVSGRSAKIGDLLKNTGATIVSGEGNTPGKRALANAEMMHQAAAMITNDRQQEKESMAEFIAKKREMFLVQMSLDTKR 258 ++ KTT S+ KIG++ + +G N ++ ++ A A I+NDR +EKE+MA+FIAKKREMFLVQMSLDTKR Sbjct: 49 IYDKTTASS------KIGNIRRFRSDDAPTGLDNYSASQSRQTRGLVAAATATISNDRLREKENMADFIAKKREMFLVQMSLDTKR 128
BLAST of mRNA_L-elsbetiae_contig1529.3752.1 vs. uniprot
Match: A0A836CAG4_9STRA (Flagellar associated protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG4_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 4.520e-8 Identity = 41/87 (47.13%), Postives = 52/87 (59.77%), Query Frame = 1 Query: 1 VWQKTTKSAVSGRSAKIGDLLKNTGATIVSGEGNTPGKRALANAEMMHQAAAMITNDRQ-QEKESMAEFIAKKREMFLVQMSLDTKR 258 +W+K + V+ S K+G +L+ G IV GK A H A+ + RQ Q+KESMA+ IAKKREMFLVQMSLDTKR Sbjct: 39 IWEKGLTTNVT-TSRKLGAMLREAGTGIVGANSAASGKAAPP-----HAASGLFKQRRQVQDKESMADLIAKKREMFLVQMSLDTKR 119
BLAST of mRNA_L-elsbetiae_contig1529.3752.1 vs. uniprot
Match: A0A0P1ACS3_PLAHL (DUF4200 domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACS3_PLAHL) HSP 1 Score: 57.4 bits (137), Expect = 1.150e-7 Identity = 43/86 (50.00%), Postives = 49/86 (56.98%), Query Frame = 1 Query: 1 VWQKTTKSAVSGRSAKIGDLLKNTGATIVSGEGNTPGKRALANAEMMHQAAAMITNDRQQEKESMAEFIAKKREMFLVQMSLDTKR 258 V+ KTT S+ G + TG S T G A A A I+NDR +E+ESMAEFIAKKREMFLVQMSLDTKR Sbjct: 43 VYDKTTASSKIGNFRRFRSNDTPTGLDDYSSVHQTRGLVAAA--------TATISNDRLRERESMAEFIAKKREMFLVQMSLDTKR 120
BLAST of mRNA_L-elsbetiae_contig1529.3752.1 vs. uniprot
Match: A0A2D4C7Z8_PYTIN (DUF4200 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7Z8_PYTIN) HSP 1 Score: 56.2 bits (134), Expect = 2.940e-7 Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 1 Query: 148 AAAMITNDRQQEKESMAEFIAKKREMFLVQMSLDTKR 258 A A I+NDR +EKE+MA+FIAKKREMFLVQMSLDTKR Sbjct: 81 ATAAISNDRLREKENMADFIAKKREMFLVQMSLDTKR 117
BLAST of mRNA_L-elsbetiae_contig1529.3752.1 vs. uniprot
Match: A0A5D6XL57_9STRA (DUF4200 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL57_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 2.960e-7 Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 1 Query: 148 AAAMITNDRQQEKESMAEFIAKKREMFLVQMSLDTKR 258 A A I+NDR +EKE+MA+FIAKKREMFLVQMSLDTKR Sbjct: 120 ATAAISNDRLREKENMADFIAKKREMFLVQMSLDTKR 156
BLAST of mRNA_L-elsbetiae_contig1529.3752.1 vs. uniprot
Match: A0A2R5FZR6_9STRA (Cilia-and flagella-associated protein 100 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZR6_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 2.970e-7 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 1 VWQKTTKSA--VSGRSAKIG------DLLKNTGATIVSGEGNTPGKRALANAEMMHQAAAMITNDRQQEKESMAEFIAKKREMFLVQMSLDTKR 258 VW+KT +S +G ++++ +L G+ + G G R +A +++ A I +R+ EK++MA+FIAKKREMFLVQMSLDTKR Sbjct: 43 VWEKTLESTKRATGGTSRVSRRELDRELSPRGGSELARSNGG--GNRLVATGKLVSNQGAGIALERRHEKDNMADFIAKKREMFLVQMSLDTKR 134 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1529.3752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1529.3752.1 >prot_L-elsbetiae_contig1529.3752.1 ID=prot_L-elsbetiae_contig1529.3752.1|Name=mRNA_L-elsbetiae_contig1529.3752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=86bp VWQKTTKSAVSGRSAKIGDLLKNTGATIVSGEGNTPGKRALANAEMMHQAback to top mRNA from alignment at L-elsbetiae_contig1529:386..1012- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1529.3752.1 ID=mRNA_L-elsbetiae_contig1529.3752.1|Name=mRNA_L-elsbetiae_contig1529.3752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=627bp|location=Sequence derived from alignment at L-elsbetiae_contig1529:386..1012- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1529:386..1012- >mRNA_L-elsbetiae_contig1529.3752.1 ID=mRNA_L-elsbetiae_contig1529.3752.1|Name=mRNA_L-elsbetiae_contig1529.3752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=516bp|location=Sequence derived from alignment at L-elsbetiae_contig1529:386..1012- (Laminarionema elsbetiae ELsaHSoW15)back to top |