mRNA_L-elsbetiae_contig15218.3722.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: D8LS67_ECTSI (CRM1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS67_ECTSI) HSP 1 Score: 355 bits (911), Expect = 1.560e-115 Identity = 180/191 (94.24%), Postives = 185/191 (96.86%), Query Frame = 1 Query: 4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQSNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL 576 +DFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEIL+ELLMNVGRTPAVAQ FYRQF LSLIQSNRQYVMDFVGNLLL+SFPNLTKAQVA FVSGLL SD DLN+FKLHLRDFLVTLKEFSTEDNADLFLEENLAKK+ DQDKARQAQLAVPGLVNPHDLPEDDMADL Sbjct: 606 EDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFKLSLIQSNRQYVMDFVGNLLLTSFPNLTKAQVAVFVSGLLNSDMDLNTFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKQADQDKARQAQLAVPGLVNPHDLPEDDMADL 796
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A6H5JJK2_9PHAE (CRM1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK2_9PHAE) HSP 1 Score: 318 bits (814), Expect = 7.670e-100 Identity = 174/239 (72.80%), Postives = 182/239 (76.15%), Query Frame = 1 Query: 4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL 576 +DFPEHRLKFFRFLKAVNTHCFG+LFEIPPEHQKLVVDSVVWAFKHTE ETGLEIL+ELLMNVGRTPAVAQ FYRQFLLSLIQ SNRQYVMDFVGNLLL+SFPNLTKAQVA FV+GLL SD DLN+FKLHLRDFLVTLKEFSTEDNADLFLEENLAKK+ D+DKARQAQLAVPGLVNPHDLPEDDMADL Sbjct: 712 EDFPEHRLKFFRFLKAVNTHCFGSLFEIPPEHQKLVVDSVVWAFKHTE---PETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQDILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDAAQHPGVTSNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKQADEDKARQAQLAVPGLVNPHDLPEDDMADL 947
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A6U1LIT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LIT5_9STRA) HSP 1 Score: 236 bits (603), Expect = 5.400e-75 Identity = 129/238 (54.20%), Postives = 153/238 (64.29%), Query Frame = 1 Query: 7 DFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL 576 DFPEHR FF+FLKAVN+HCF LF IPP HQKLVVDSV+WAFKHTERN+AETGLEILHELL NVGRTP VAQ FY+ FLL LIQ +N +++ + V N+L+SSFPNLT++QV FV GL + DL SFK HLRDFL+ LKEFS EDN DLF EEN +K+++ +A +LAVPGL+NPH+ P DDMADL Sbjct: 71 DFPEHRTNFFQFLKAVNSHCFQALFSIPPAHQKLVVDSVIWAFKHTERNVAETGLEILHELLQNVGRTPEVAQGFYQSFLLVLIQDILAVMTDRLHKSGFKLHATLLRHMFHLVEMGQVTAPLFDVAQFPSNKTNHEFLREHVANMLISSFPNLTRSQVLQFVVGLFNVNMDLQSFKTHLRDFLIQLKEFSAEDNTDLFNEENQRQKQQNDAQALAQKLAVPGLLNPHERP-DDMADL 307
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A835YZ33_9STRA (Exportin1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ33_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.740e-69 Identity = 129/236 (54.66%), Postives = 156/236 (66.10%), Query Frame = 1 Query: 1 LQDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQS-------------------------------------------NRQYVMDFVGNLLLSSFP-NLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL 576 ++DFPEHR+KFF+FLKAVNTHCFG+LFEIPP HQKLVVD+VVWAFKHTERNIAETGL+IL ELL NVGR PAVAQ FY+Q+LLSLIQ N+Q++ ++V ++LL SFP NLT+A FV GL +LN+FK HLRDFL+T+KEFS E++ +LF EE A K QA+LAVPGLVNPH+ PE+DM DL Sbjct: 817 MEDFPEHRIKFFQFLKAVNTHCFGSLFEIPPAHQKLVVDAVVWAFKHTERNIAETGLDILLELLQNVGRAPAVAQGFYQQYLLSLIQDILAVMTDMLHKSCFKAHATLLRHMFHLTQAGQVCRPLPPGAEGNKQFLAEYVCDMLLQSFPQNLTRANAVEFVRGLFDERMELNAFKQHLRDFLITIKEFSPEESQELFYEETQAYKAAADQALLQARLAVPGLVNPHERPEEDMGDL 1052
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S2P7R7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P7R7_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.900e-63 Identity = 111/236 (47.03%), Postives = 147/236 (62.29%), Query Frame = 1 Query: 4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDM 567 +DFPEHR++FF F++A+NTHCF LF IP HQKLVVDSVVWA KHTERNI++TGL ILHELL NV +TP +AQ FY+Q+LL+LIQ +N ++ + + NLL+ SFPNLTK+QV+ FV G+ + DL SFK HLRDFL+ LKEFSTEDN+ LF EE A++R+ + + + AVPGL+ P ++ +DD+ Sbjct: 126 EDFPEHRIRFFEFIRAINTHCFQALFNIPSGHQKLVVDSVVWAMKHTERNISDTGLNILHELLNNVAKTPDIAQGFYQQYLLALIQDVFAVMTDRLHKSGFKMHATLLRQMFHLVQMNQVTVPLFDPANAPAGQTNPSFLREHISNLLIQSFPNLTKSQVSKFVDGMFDLNMDLPSFKTHLRDFLIQLKEFSTEDNSGLFGEEQDAQQRQQLEAQQAYRSAVPGLMKPSEIIDDDL 361
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S0BW11_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BW11_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.060e-62 Identity = 114/234 (48.72%), Postives = 147/234 (62.82%), Query Frame = 1 Query: 4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPED 561 +DFPEHR++FF FL+AVN+ CF LF IP EHQKLVVDSVVWA KHTERNI+ETGLEILHELL+NVGRTP VAQ FY+QFLL+LIQ +N ++ D + NLL++SFPNLTK+QV+ FV G+ DL +FK HLRDFL+ LKEFS EDN+ LF EE +++ ++ A +++ AVPG++ P ++ D Sbjct: 313 EDFPEHRIRFFEFLRAVNSQCFPALFNIPSEHQKLVVDSVVWAMKHTERNISETGLEILHELLLNVGRTPNVAQGFYQQFLLALIQDVFAVLTDRLHKSGFKMHATLLRVMFHLVQMNQVTMPLFDPATAAPGQTNSVFLRDHISNLLVTSFPNLTKSQVSKFVEGMCDLRMDLPTFKTHLRDFLIQLKEFSVEDNSGLFQEETDLERKHKEEAAMESRNAVPGMLKPSEIDND 546
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S1YZH3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZH3_TRICV) HSP 1 Score: 215 bits (548), Expect = 2.200e-61 Identity = 114/234 (48.72%), Postives = 147/234 (62.82%), Query Frame = 1 Query: 4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPED 561 +D+PEHR++FF+FLKA+N HCF LF IPPEHQKLV+DSVVWA KHTERNIA+TGLEILHELL+NVGRTP +AQ FY+Q+LL+LIQ SN ++ + + NLLL+SFPNLT++QV FV G+ DL +FK HLRDFL+ LKEFS EDN+ LF EEN + ++ ++ R + AVPGL+ P ++ D Sbjct: 867 EDYPEHRIRFFQFLKAINQHCFPALFNIPPEHQKLVIDSVVWAMKHTERNIADTGLEILHELLLNVGRTPNIAQGFYQQYLLTLIQDVFAVMTDRLHKSGFKMHATLLRHMFHLVQMNQVTVPLFDPSSAPPGQSNPAFLREHISNLLLTSFPNLTRSQVLKFVDGMFDLKMDLPTFKTHLRDFLIQLKEFSIEDNSGLFNEENEIEAQKREEAVRAQRSAVPGLLKPSEIDND 1100
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A448Z8Z6_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8Z6_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.020e-60 Identity = 115/235 (48.94%), Postives = 150/235 (63.83%), Query Frame = 1 Query: 4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQL-AVPGLVNPHDLPED 561 +DFPEHR++F+ FL+A+N HCF LF IPPEHQKLVV ++VWA KH ERNI++TGLEILHELL+NVGRTP VAQAFY+Q+LLSLIQ +N ++ +++GNLL++SFPNL+K QV+ FV G+ DL++FK HLRDFL+ LKEFS EDN+ LF EE A++R Q+KA AQ AVPG++ P ++ D Sbjct: 852 EDFPEHRIRFYEFLRAINQHCFPALFNIPPEHQKLVVHAIVWAMKHKERNISDTGLEILHELLLNVGRTPNVAQAFYQQYLLSLIQDVFAVMTDRFHKSGFKIHATLLRHMFHLVQANQVTVPLFEPSTQPPGQTNPAFLREYIGNLLITSFPNLSKTQVSKFVDGMFDIKMDLSTFKTHLRDFLIELKEFSAEDNSALFSEEQEAERRR-QEKAMMAQRSAVPGMIKPSEIDND 1085
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S2V9Y0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V9Y0_9STRA) HSP 1 Score: 206 bits (525), Expect = 3.480e-60 Identity = 111/231 (48.05%), Postives = 144/231 (62.34%), Query Frame = 1 Query: 4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDL 552 +DFPEHR++FF FL+AVN HCF +LF IPPEHQKLVV S+VWA KHTERNI++TGL+ILHELL+NV R+P V+QAFY+Q+LLSLIQ +N+ ++ D + NLL+ SFPNLTK QVA FV G+ + DL +FK HLRDFL+ LKEFS+EDNA LF EE + R+ + + AVPG++ P ++ Sbjct: 370 EDFPEHRIRFFEFLRAVNKHCFPSLFSIPPEHQKLVVHSIVWAMKHTERNISDTGLDILHELLLNVERSPNVSQAFYQQYLLSLIQDVFAVMTDRLHKSGFRMHATLLRSMFHMVQNNQVTVPLFDPATQPPGTTNQVFLRDHISNLLIQSFPNLTKPQVAKFVEGMFDTRMDLTTFKGHLRDFLIELKEFSSEDNAALFTEEKEREARQREQALLAQRSAVPGMLKPSEI 600
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S1D775_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D775_CYCTE) HSP 1 Score: 201 bits (510), Expect = 9.650e-60 Identity = 107/236 (45.34%), Postives = 143/236 (60.59%), Query Frame = 1 Query: 4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDM 567 +D+PEHR++FF FLK++N +CF LF IP EHQKLVVDSVVWA KHTERNIA+TGL+IL+EL+ NV +TP VAQ FY+QFLLSLIQ +N ++ D + NLL++SFPNLT++QV+ FV G+ DL SFK H RDFL+ LKEFS EDN+ LF +E + RE + + AVPG++ P ++ ++D+ Sbjct: 175 EDYPEHRIRFFEFLKSINQYCFPALFNIPAEHQKLVVDSVVWAMKHTERNIADTGLDILNELIQNVSKTPNVAQGFYQQFLLSLIQDVFAVMTDRLHKTGFRMQATLLRTMFHLVVNNDVTVPLFDPSTAAPGQTNHVFLRDHISNLLITSFPNLTRSQVSSFVDGMFDPKLDLPSFKTHCRDFLIQLKEFSVEDNSGLFRDEAEKEAREREQAIMARRSAVPGMLKPSEIVDEDL 410 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15218.3722.1 >prot_L-elsbetiae_contig15218.3722.1 ID=prot_L-elsbetiae_contig15218.3722.1|Name=mRNA_L-elsbetiae_contig15218.3722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp LQDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERback to top mRNA from alignment at L-elsbetiae_contig15218:398..4047+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15218.3722.1 ID=mRNA_L-elsbetiae_contig15218.3722.1|Name=mRNA_L-elsbetiae_contig15218.3722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3650bp|location=Sequence derived from alignment at L-elsbetiae_contig15218:398..4047+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15218:398..4047+ >mRNA_L-elsbetiae_contig15218.3722.1 ID=mRNA_L-elsbetiae_contig15218.3722.1|Name=mRNA_L-elsbetiae_contig15218.3722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1158bp|location=Sequence derived from alignment at L-elsbetiae_contig15218:398..4047+ (Laminarionema elsbetiae ELsaHSoW15)back to top |