prot_L-elsbetiae_contig15218.3722.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15218.3722.1
Unique Nameprot_L-elsbetiae_contig15218.3722.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length193
Homology
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BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: D8LS67_ECTSI (CRM1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS67_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 1.560e-115
Identity = 180/191 (94.24%), Postives = 185/191 (96.86%), Query Frame = 0 
Query:    2 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQSNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL 192
            +DFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEIL+ELLMNVGRTPAVAQ FYRQF LSLIQSNRQYVMDFVGNLLL+SFPNLTKAQVA FVSGLL SD DLN+FKLHLRDFLVTLKEFSTEDNADLFLEENLAKK+ DQDKARQAQLAVPGLVNPHDLPEDDMADL
Sbjct:  606 EDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFKLSLIQSNRQYVMDFVGNLLLTSFPNLTKAQVAVFVSGLLNSDMDLNTFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKQADQDKARQAQLAVPGLVNPHDLPEDDMADL 796
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BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A6H5JJK2_9PHAE (CRM1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK2_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 7.670e-100
Identity = 174/239 (72.80%), Postives = 182/239 (76.15%), Query Frame = 0 
Query:    2 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL 192
            +DFPEHRLKFFRFLKAVNTHCFG+LFEIPPEHQKLVVDSVVWAFKHTE    ETGLEIL+ELLMNVGRTPAVAQ FYRQFLLSLIQ                                                SNRQYVMDFVGNLLL+SFPNLTKAQVA FV+GLL SD DLN+FKLHLRDFLVTLKEFSTEDNADLFLEENLAKK+ D+DKARQAQLAVPGLVNPHDLPEDDMADL
Sbjct:  712 EDFPEHRLKFFRFLKAVNTHCFGSLFEIPPEHQKLVVDSVVWAFKHTE---PETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQDILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDAAQHPGVTSNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKQADEDKARQAQLAVPGLVNPHDLPEDDMADL 947
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BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A6U1LIT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LIT5_9STRA)

HSP 1 Score: 236 bits (603), Expect = 5.400e-75
Identity = 129/238 (54.20%), Postives = 153/238 (64.29%), Query Frame = 0 
Query:    3 DFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL 192
            DFPEHR  FF+FLKAVN+HCF  LF IPP HQKLVVDSV+WAFKHTERN+AETGLEILHELL NVGRTP VAQ FY+ FLL LIQ                                                +N +++ + V N+L+SSFPNLT++QV  FV GL   + DL SFK HLRDFL+ LKEFS EDN DLF EEN  +K+++  +A   +LAVPGL+NPH+ P DDMADL
Sbjct:   71 DFPEHRTNFFQFLKAVNSHCFQALFSIPPAHQKLVVDSVIWAFKHTERNVAETGLEILHELLQNVGRTPEVAQGFYQSFLLVLIQDILAVMTDRLHKSGFKLHATLLRHMFHLVEMGQVTAPLFDVAQFPSNKTNHEFLREHVANMLISSFPNLTRSQVLQFVVGLFNVNMDLQSFKTHLRDFLIQLKEFSAEDNTDLFNEENQRQKQQNDAQALAQKLAVPGLLNPHERP-DDMADL 307
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BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A835YZ33_9STRA (Exportin1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ33_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.740e-69
Identity = 129/236 (54.66%), Postives = 156/236 (66.10%), Query Frame = 0 
Query:    1 LQDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQS-------------------------------------------NRQYVMDFVGNLLLSSFP-NLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL 192
            ++DFPEHR+KFF+FLKAVNTHCFG+LFEIPP HQKLVVD+VVWAFKHTERNIAETGL+IL ELL NVGR PAVAQ FY+Q+LLSLIQ                                            N+Q++ ++V ++LL SFP NLT+A    FV GL     +LN+FK HLRDFL+T+KEFS E++ +LF EE  A K        QA+LAVPGLVNPH+ PE+DM DL
Sbjct:  817 MEDFPEHRIKFFQFLKAVNTHCFGSLFEIPPAHQKLVVDAVVWAFKHTERNIAETGLDILLELLQNVGRAPAVAQGFYQQYLLSLIQDILAVMTDMLHKSCFKAHATLLRHMFHLTQAGQVCRPLPPGAEGNKQFLAEYVCDMLLQSFPQNLTRANAVEFVRGLFDERMELNAFKQHLRDFLITIKEFSPEESQELFYEETQAYKAAADQALLQARLAVPGLVNPHERPEEDMGDL 1052
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BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S2P7R7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P7R7_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.900e-63
Identity = 111/236 (47.03%), Postives = 147/236 (62.29%), Query Frame = 0 
Query:    2 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDM 189
            +DFPEHR++FF F++A+NTHCF  LF IP  HQKLVVDSVVWA KHTERNI++TGL ILHELL NV +TP +AQ FY+Q+LL+LIQ                                                +N  ++ + + NLL+ SFPNLTK+QV+ FV G+   + DL SFK HLRDFL+ LKEFSTEDN+ LF EE  A++R+  +  +  + AVPGL+ P ++ +DD+
Sbjct:  126 EDFPEHRIRFFEFIRAINTHCFQALFNIPSGHQKLVVDSVVWAMKHTERNISDTGLNILHELLNNVAKTPDIAQGFYQQYLLALIQDVFAVMTDRLHKSGFKMHATLLRQMFHLVQMNQVTVPLFDPANAPAGQTNPSFLREHISNLLIQSFPNLTKSQVSKFVDGMFDLNMDLPSFKTHLRDFLIQLKEFSTEDNSGLFGEEQDAQQRQQLEAQQAYRSAVPGLMKPSEIIDDDL 361
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BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S0BW11_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BW11_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.060e-62
Identity = 114/234 (48.72%), Postives = 147/234 (62.82%), Query Frame = 0 
Query:    2 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPED 187
            +DFPEHR++FF FL+AVN+ CF  LF IP EHQKLVVDSVVWA KHTERNI+ETGLEILHELL+NVGRTP VAQ FY+QFLL+LIQ                                                +N  ++ D + NLL++SFPNLTK+QV+ FV G+     DL +FK HLRDFL+ LKEFS EDN+ LF EE   +++  ++ A +++ AVPG++ P ++  D
Sbjct:  313 EDFPEHRIRFFEFLRAVNSQCFPALFNIPSEHQKLVVDSVVWAMKHTERNISETGLEILHELLLNVGRTPNVAQGFYQQFLLALIQDVFAVLTDRLHKSGFKMHATLLRVMFHLVQMNQVTMPLFDPATAAPGQTNSVFLRDHISNLLVTSFPNLTKSQVSKFVEGMCDLRMDLPTFKTHLRDFLIQLKEFSVEDNSGLFQEETDLERKHKEEAAMESRNAVPGMLKPSEIDND 546
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BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S1YZH3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZH3_TRICV)

HSP 1 Score: 215 bits (548), Expect = 2.200e-61
Identity = 114/234 (48.72%), Postives = 147/234 (62.82%), Query Frame = 0 
Query:    2 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPED 187
            +D+PEHR++FF+FLKA+N HCF  LF IPPEHQKLV+DSVVWA KHTERNIA+TGLEILHELL+NVGRTP +AQ FY+Q+LL+LIQ                                                SN  ++ + + NLLL+SFPNLT++QV  FV G+     DL +FK HLRDFL+ LKEFS EDN+ LF EEN  + ++ ++  R  + AVPGL+ P ++  D
Sbjct:  867 EDYPEHRIRFFQFLKAINQHCFPALFNIPPEHQKLVIDSVVWAMKHTERNIADTGLEILHELLLNVGRTPNIAQGFYQQYLLTLIQDVFAVMTDRLHKSGFKMHATLLRHMFHLVQMNQVTVPLFDPSSAPPGQSNPAFLREHISNLLLTSFPNLTRSQVLKFVDGMFDLKMDLPTFKTHLRDFLIQLKEFSIEDNSGLFNEENEIEAQKREEAVRAQRSAVPGLLKPSEIDND 1100
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BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A448Z8Z6_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8Z6_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.020e-60
Identity = 115/235 (48.94%), Postives = 150/235 (63.83%), Query Frame = 0 
Query:    2 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQL-AVPGLVNPHDLPED 187
            +DFPEHR++F+ FL+A+N HCF  LF IPPEHQKLVV ++VWA KH ERNI++TGLEILHELL+NVGRTP VAQAFY+Q+LLSLIQ                                                +N  ++ +++GNLL++SFPNL+K QV+ FV G+     DL++FK HLRDFL+ LKEFS EDN+ LF EE  A++R  Q+KA  AQ  AVPG++ P ++  D
Sbjct:  852 EDFPEHRIRFYEFLRAINQHCFPALFNIPPEHQKLVVHAIVWAMKHKERNISDTGLEILHELLLNVGRTPNVAQAFYQQYLLSLIQDVFAVMTDRFHKSGFKIHATLLRHMFHLVQANQVTVPLFEPSTQPPGQTNPAFLREYIGNLLITSFPNLSKTQVSKFVDGMFDIKMDLSTFKTHLRDFLIELKEFSAEDNSALFSEEQEAERRR-QEKAMMAQRSAVPGMIKPSEIDND 1085
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BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S2V9Y0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V9Y0_9STRA)

HSP 1 Score: 206 bits (525), Expect = 3.480e-60
Identity = 111/231 (48.05%), Postives = 144/231 (62.34%), Query Frame = 0 
Query:    2 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDL 184
            +DFPEHR++FF FL+AVN HCF +LF IPPEHQKLVV S+VWA KHTERNI++TGL+ILHELL+NV R+P V+QAFY+Q+LLSLIQ                                                +N+ ++ D + NLL+ SFPNLTK QVA FV G+  +  DL +FK HLRDFL+ LKEFS+EDNA LF EE   + R+ +      + AVPG++ P ++
Sbjct:  370 EDFPEHRIRFFEFLRAVNKHCFPSLFSIPPEHQKLVVHSIVWAMKHTERNISDTGLDILHELLLNVERSPNVSQAFYQQYLLSLIQDVFAVMTDRLHKSGFRMHATLLRSMFHMVQNNQVTVPLFDPATQPPGTTNQVFLRDHISNLLIQSFPNLTKPQVAKFVEGMFDTRMDLTTFKGHLRDFLIELKEFSSEDNAALFTEEKEREARQREQALLAQRSAVPGMLKPSEI 600
[Close]
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S1D775_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D775_CYCTE)

HSP 1 Score: 201 bits (510), Expect = 9.650e-60
Identity = 107/236 (45.34%), Postives = 143/236 (60.59%), Query Frame = 0 
Query:    2 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDM 189
            +D+PEHR++FF FLK++N +CF  LF IP EHQKLVVDSVVWA KHTERNIA+TGL+IL+EL+ NV +TP VAQ FY+QFLLSLIQ                                                +N  ++ D + NLL++SFPNLT++QV+ FV G+     DL SFK H RDFL+ LKEFS EDN+ LF +E   + RE +      + AVPG++ P ++ ++D+
Sbjct:  175 EDYPEHRIRFFEFLKSINQYCFPALFNIPAEHQKLVVDSVVWAMKHTERNIADTGLDILNELIQNVSKTPNVAQGFYQQFLLSLIQDVFAVMTDRLHKTGFRMQATLLRTMFHLVVNNDVTVPLFDPSTAAPGQTNHVFLRDHISNLLITSFPNLTRSQVSSFVDGMFDPKLDLPSFKTHCRDFLIQLKEFSVEDNSGLFRDEAEKEAREREQAIMARRSAVPGMLKPSEIVDEDL 410
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS67_ECTSI1.560e-11594.24CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JJK2_9PHAE7.670e-10072.80CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6U1LIT5_9STRA5.400e-7554.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YZ33_9STRA1.740e-6954.66Exportin1 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A7S2P7R7_9STRA1.900e-6347.03Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A7S0BW11_9STRA1.060e-6248.72Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1YZH3_TRICV2.200e-6148.72Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A448Z8Z6_9STRA1.020e-6048.94Importin N-terminal domain-containing protein n=1 ... [more]
A0A7S2V9Y0_9STRA3.480e-6048.05Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1D775_CYCTE9.650e-6045.34Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014877Exportin-1, C-terminalSMARTSM01102CRM1_C_2coord: 2..146
e-value: 4.5E-16
score: 69.4
IPR014877Exportin-1, C-terminalPFAMPF08767CRM1_Ccoord: 2..87
e-value: 1.6E-30
score: 106.4
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 88..186
e-value: 2.7E-28
score: 100.8
coord: 1..87
e-value: 6.2E-35
score: 122.6
NoneNo IPR availablePANTHERPTHR11223EXPORTIN 1/5coord: 2..87
NoneNo IPR availablePANTHERPTHR11223EXPORTIN 1/5coord: 88..187
NoneNo IPR availablePANTHERPTHR11223:SF4EXPORTIN 1 (CRM1 HOMOLOG, YEAST) Bcoord: 2..87
NoneNo IPR availablePANTHERPTHR11223:SF4EXPORTIN 1 (CRM1 HOMOLOG, YEAST) Bcoord: 88..187
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15218contigL-elsbetiae_contig15218:398..4047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15218.3722.1mRNA_L-elsbetiae_contig15218.3722.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15218 398..4047 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15218.3722.1 ID=prot_L-elsbetiae_contig15218.3722.1|Name=mRNA_L-elsbetiae_contig15218.3722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp
LQDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTER
NIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQSNRQYVMDFVGNL
LLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNA
DLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014877XPO1_C_dom
IPR011989ARM-like
IPR016024ARM-type_fold