mRNA_L-elsbetiae_contig15218.3722.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15218.3722.1
Unique NamemRNA_L-elsbetiae_contig15218.3722.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: D8LS67_ECTSI (CRM1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS67_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 1.560e-115
Identity = 180/191 (94.24%), Postives = 185/191 (96.86%), Query Frame = 1
Query:    4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQSNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL 576
            +DFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEIL+ELLMNVGRTPAVAQ FYRQF LSLIQSNRQYVMDFVGNLLL+SFPNLTKAQVA FVSGLL SD DLN+FKLHLRDFLVTLKEFSTEDNADLFLEENLAKK+ DQDKARQAQLAVPGLVNPHDLPEDDMADL
Sbjct:  606 EDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILYELLMNVGRTPAVAQGFYRQFKLSLIQSNRQYVMDFVGNLLLTSFPNLTKAQVAVFVSGLLNSDMDLNTFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKQADQDKARQAQLAVPGLVNPHDLPEDDMADL 796          
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A6H5JJK2_9PHAE (CRM1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK2_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 7.670e-100
Identity = 174/239 (72.80%), Postives = 182/239 (76.15%), Query Frame = 1
Query:    4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL 576
            +DFPEHRLKFFRFLKAVNTHCFG+LFEIPPEHQKLVVDSVVWAFKHTE    ETGLEIL+ELLMNVGRTPAVAQ FYRQFLLSLIQ                                                SNRQYVMDFVGNLLL+SFPNLTKAQVA FV+GLL SD DLN+FKLHLRDFLVTLKEFSTEDNADLFLEENLAKK+ D+DKARQAQLAVPGLVNPHDLPEDDMADL
Sbjct:  712 EDFPEHRLKFFRFLKAVNTHCFGSLFEIPPEHQKLVVDSVVWAFKHTE---PETGLEILYELLMNVGRTPAVAQGFYRQFLLSLIQDILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDAAQHPGVTSNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKQADEDKARQAQLAVPGLVNPHDLPEDDMADL 947          
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A6U1LIT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LIT5_9STRA)

HSP 1 Score: 236 bits (603), Expect = 5.400e-75
Identity = 129/238 (54.20%), Postives = 153/238 (64.29%), Query Frame = 1
Query:    7 DFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL 576
            DFPEHR  FF+FLKAVN+HCF  LF IPP HQKLVVDSV+WAFKHTERN+AETGLEILHELL NVGRTP VAQ FY+ FLL LIQ                                                +N +++ + V N+L+SSFPNLT++QV  FV GL   + DL SFK HLRDFL+ LKEFS EDN DLF EEN  +K+++  +A   +LAVPGL+NPH+ P DDMADL
Sbjct:   71 DFPEHRTNFFQFLKAVNSHCFQALFSIPPAHQKLVVDSVIWAFKHTERNVAETGLEILHELLQNVGRTPEVAQGFYQSFLLVLIQDILAVMTDRLHKSGFKLHATLLRHMFHLVEMGQVTAPLFDVAQFPSNKTNHEFLREHVANMLISSFPNLTRSQVLQFVVGLFNVNMDLQSFKTHLRDFLIQLKEFSAEDNTDLFNEENQRQKQQNDAQALAQKLAVPGLLNPHERP-DDMADL 307          
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A835YZ33_9STRA (Exportin1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ33_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.740e-69
Identity = 129/236 (54.66%), Postives = 156/236 (66.10%), Query Frame = 1
Query:    1 LQDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQS-------------------------------------------NRQYVMDFVGNLLLSSFP-NLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL 576
            ++DFPEHR+KFF+FLKAVNTHCFG+LFEIPP HQKLVVD+VVWAFKHTERNIAETGL+IL ELL NVGR PAVAQ FY+Q+LLSLIQ                                            N+Q++ ++V ++LL SFP NLT+A    FV GL     +LN+FK HLRDFL+T+KEFS E++ +LF EE  A K        QA+LAVPGLVNPH+ PE+DM DL
Sbjct:  817 MEDFPEHRIKFFQFLKAVNTHCFGSLFEIPPAHQKLVVDAVVWAFKHTERNIAETGLDILLELLQNVGRAPAVAQGFYQQYLLSLIQDILAVMTDMLHKSCFKAHATLLRHMFHLTQAGQVCRPLPPGAEGNKQFLAEYVCDMLLQSFPQNLTRANAVEFVRGLFDERMELNAFKQHLRDFLITIKEFSPEESQELFYEETQAYKAAADQALLQARLAVPGLVNPHERPEEDMGDL 1052          
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S2P7R7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P7R7_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.900e-63
Identity = 111/236 (47.03%), Postives = 147/236 (62.29%), Query Frame = 1
Query:    4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDM 567
            +DFPEHR++FF F++A+NTHCF  LF IP  HQKLVVDSVVWA KHTERNI++TGL ILHELL NV +TP +AQ FY+Q+LL+LIQ                                                +N  ++ + + NLL+ SFPNLTK+QV+ FV G+   + DL SFK HLRDFL+ LKEFSTEDN+ LF EE  A++R+  +  +  + AVPGL+ P ++ +DD+
Sbjct:  126 EDFPEHRIRFFEFIRAINTHCFQALFNIPSGHQKLVVDSVVWAMKHTERNISDTGLNILHELLNNVAKTPDIAQGFYQQYLLALIQDVFAVMTDRLHKSGFKMHATLLRQMFHLVQMNQVTVPLFDPANAPAGQTNPSFLREHISNLLIQSFPNLTKSQVSKFVDGMFDLNMDLPSFKTHLRDFLIQLKEFSTEDNSGLFGEEQDAQQRQQLEAQQAYRSAVPGLMKPSEIIDDDL 361          
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S0BW11_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BW11_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.060e-62
Identity = 114/234 (48.72%), Postives = 147/234 (62.82%), Query Frame = 1
Query:    4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPED 561
            +DFPEHR++FF FL+AVN+ CF  LF IP EHQKLVVDSVVWA KHTERNI+ETGLEILHELL+NVGRTP VAQ FY+QFLL+LIQ                                                +N  ++ D + NLL++SFPNLTK+QV+ FV G+     DL +FK HLRDFL+ LKEFS EDN+ LF EE   +++  ++ A +++ AVPG++ P ++  D
Sbjct:  313 EDFPEHRIRFFEFLRAVNSQCFPALFNIPSEHQKLVVDSVVWAMKHTERNISETGLEILHELLLNVGRTPNVAQGFYQQFLLALIQDVFAVLTDRLHKSGFKMHATLLRVMFHLVQMNQVTMPLFDPATAAPGQTNSVFLRDHISNLLVTSFPNLTKSQVSKFVEGMCDLRMDLPTFKTHLRDFLIQLKEFSVEDNSGLFQEETDLERKHKEEAAMESRNAVPGMLKPSEIDND 546          
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S1YZH3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZH3_TRICV)

HSP 1 Score: 215 bits (548), Expect = 2.200e-61
Identity = 114/234 (48.72%), Postives = 147/234 (62.82%), Query Frame = 1
Query:    4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPED 561
            +D+PEHR++FF+FLKA+N HCF  LF IPPEHQKLV+DSVVWA KHTERNIA+TGLEILHELL+NVGRTP +AQ FY+Q+LL+LIQ                                                SN  ++ + + NLLL+SFPNLT++QV  FV G+     DL +FK HLRDFL+ LKEFS EDN+ LF EEN  + ++ ++  R  + AVPGL+ P ++  D
Sbjct:  867 EDYPEHRIRFFQFLKAINQHCFPALFNIPPEHQKLVIDSVVWAMKHTERNIADTGLEILHELLLNVGRTPNIAQGFYQQYLLTLIQDVFAVMTDRLHKSGFKMHATLLRHMFHLVQMNQVTVPLFDPSSAPPGQSNPAFLREHISNLLLTSFPNLTRSQVLKFVDGMFDLKMDLPTFKTHLRDFLIQLKEFSIEDNSGLFNEENEIEAQKREEAVRAQRSAVPGLLKPSEIDND 1100          
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A448Z8Z6_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8Z6_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.020e-60
Identity = 115/235 (48.94%), Postives = 150/235 (63.83%), Query Frame = 1
Query:    4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQL-AVPGLVNPHDLPED 561
            +DFPEHR++F+ FL+A+N HCF  LF IPPEHQKLVV ++VWA KH ERNI++TGLEILHELL+NVGRTP VAQAFY+Q+LLSLIQ                                                +N  ++ +++GNLL++SFPNL+K QV+ FV G+     DL++FK HLRDFL+ LKEFS EDN+ LF EE  A++R  Q+KA  AQ  AVPG++ P ++  D
Sbjct:  852 EDFPEHRIRFYEFLRAINQHCFPALFNIPPEHQKLVVHAIVWAMKHKERNISDTGLEILHELLLNVGRTPNVAQAFYQQYLLSLIQDVFAVMTDRFHKSGFKIHATLLRHMFHLVQANQVTVPLFEPSTQPPGQTNPAFLREYIGNLLITSFPNLSKTQVSKFVDGMFDIKMDLSTFKTHLRDFLIELKEFSAEDNSALFSEEQEAERRR-QEKAMMAQRSAVPGMIKPSEIDND 1085          
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S2V9Y0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V9Y0_9STRA)

HSP 1 Score: 206 bits (525), Expect = 3.480e-60
Identity = 111/231 (48.05%), Postives = 144/231 (62.34%), Query Frame = 1
Query:    4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDL 552
            +DFPEHR++FF FL+AVN HCF +LF IPPEHQKLVV S+VWA KHTERNI++TGL+ILHELL+NV R+P V+QAFY+Q+LLSLIQ                                                +N+ ++ D + NLL+ SFPNLTK QVA FV G+  +  DL +FK HLRDFL+ LKEFS+EDNA LF EE   + R+ +      + AVPG++ P ++
Sbjct:  370 EDFPEHRIRFFEFLRAVNKHCFPSLFSIPPEHQKLVVHSIVWAMKHTERNISDTGLDILHELLLNVERSPNVSQAFYQQYLLSLIQDVFAVMTDRLHKSGFRMHATLLRSMFHMVQNNQVTVPLFDPATQPPGTTNQVFLRDHISNLLIQSFPNLTKPQVAKFVEGMFDTRMDLTTFKGHLRDFLIELKEFSSEDNAALFTEEKEREARQREQALLAQRSAVPGMLKPSEI 600          
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Match: A0A7S1D775_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D775_CYCTE)

HSP 1 Score: 201 bits (510), Expect = 9.650e-60
Identity = 107/236 (45.34%), Postives = 143/236 (60.59%), Query Frame = 1
Query:    4 QDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTERNIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQ------------------------------------------------SNRQYVMDFVGNLLLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDM 567
            +D+PEHR++FF FLK++N +CF  LF IP EHQKLVVDSVVWA KHTERNIA+TGL+IL+EL+ NV +TP VAQ FY+QFLLSLIQ                                                +N  ++ D + NLL++SFPNLT++QV+ FV G+     DL SFK H RDFL+ LKEFS EDN+ LF +E   + RE +      + AVPG++ P ++ ++D+
Sbjct:  175 EDYPEHRIRFFEFLKSINQYCFPALFNIPAEHQKLVVDSVVWAMKHTERNIADTGLDILNELIQNVSKTPNVAQGFYQQFLLSLIQDVFAVMTDRLHKTGFRMQATLLRTMFHLVVNNDVTVPLFDPSTAAPGQTNHVFLRDHISNLLITSFPNLTRSQVSSFVDGMFDPKLDLPSFKTHCRDFLIQLKEFSVEDNSGLFRDEAEKEAREREQAIMARRSAVPGMLKPSEIVDEDL 410          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15218.3722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS67_ECTSI1.560e-11594.24CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JJK2_9PHAE7.670e-10072.80CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6U1LIT5_9STRA5.400e-7554.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YZ33_9STRA1.740e-6954.66Exportin1 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A7S2P7R7_9STRA1.900e-6347.03Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A7S0BW11_9STRA1.060e-6248.72Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1YZH3_TRICV2.200e-6148.72Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A448Z8Z6_9STRA1.020e-6048.94Importin N-terminal domain-containing protein n=1 ... [more]
A0A7S2V9Y0_9STRA3.480e-6048.05Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1D775_CYCTE9.650e-6045.34Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15218contigL-elsbetiae_contig15218:398..4047 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score358.6
Seed ortholog evalue1.8e-96
Seed eggNOG ortholog2880.D8LS67
Preferred nameXPO1
KEGG koko:K03939,ko:K14290
KEGG TC1.I.1,3.D.1.6
KEGG Pathwayko00190,ko01100,ko03008,ko03013,ko04013,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,ko05164,ko05166,ko05169,map00190,map01100,map03008,map03013,map04013,map04714,map04723,map04932,map05010,map05012,map05016,map05164,map05166,map05169
KEGG ModuleM00143
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000054,GO:0000055,GO:0000056,GO:0000122,GO:0000775,GO:0000776,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0005049,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005829,GO:0005911,GO:0006355,GO:0006357,GO:0006403,GO:0006405,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0007275,GO:0008104,GO:0008150,GO:0008565,GO:0009266,GO:0009408,GO:0009506,GO:0009553,GO:0009555,GO:0009628,GO:0009653,GO:0009826,GO:0009846,GO:0009856,GO:0009860,GO:0009889,GO:0009890,GO:0009892,GO:0009932,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016049,GO:0019219,GO:0019222,GO:0019904,GO:0022414,GO:0022613,GO:0030054,GO:0030154,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031503,GO:0032386,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033036,GO:0033157,GO:0033750,GO:0034613,GO:0040007,GO:0042221,GO:0042254,GO:0042493,GO:0042886,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044706,GO:0045184,GO:0045892,GO:0045934,GO:0046822,GO:0046825,GO:0046907,GO:0048229,GO:0048468,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051252,GO:0051253,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0055044,GO:0060255,GO:0060341,GO:0060560,GO:0065007,GO:0070201,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0090087,GO:0098687,GO:0140104,GO:0140142,GO:1902679,GO:1903506,GO:1903507,GO:1903827,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.nuclear export signal receptor activity
EggNOG OGsCOG5101@1,KOG2020@2759
COG Functional cat.UY
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03009,ko03016,ko03019,ko03036
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-12_004630.1
Exons4
Model size579
Cds size579
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15218.3722.1prot_L-elsbetiae_contig15218.3722.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15218 398..4047 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815619.5349894-CDS-L-elsbetiae_contig15218:397..5541622815619.5349894-CDS-L-elsbetiae_contig15218:397..554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15218 398..554 +
1691682995.2466767-CDS-L-elsbetiae_contig15218:397..5541691682995.2466767-CDS-L-elsbetiae_contig15218:397..554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15218 398..554 +
1622815619.5482805-CDS-L-elsbetiae_contig15218:1650..17541622815619.5482805-CDS-L-elsbetiae_contig15218:1650..1754Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15218 1651..1754 +
1691682995.2635164-CDS-L-elsbetiae_contig15218:1650..17541691682995.2635164-CDS-L-elsbetiae_contig15218:1650..1754Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15218 1651..1754 +
1622815619.5624702-CDS-L-elsbetiae_contig15218:3120..32851622815619.5624702-CDS-L-elsbetiae_contig15218:3120..3285Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15218 3121..3285 +
1691682995.2719727-CDS-L-elsbetiae_contig15218:3120..32851691682995.2719727-CDS-L-elsbetiae_contig15218:3120..3285Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15218 3121..3285 +
1622815619.5768142-CDS-L-elsbetiae_contig15218:3894..40471622815619.5768142-CDS-L-elsbetiae_contig15218:3894..4047Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15218 3895..4047 +
1691682995.2806153-CDS-L-elsbetiae_contig15218:3894..40471691682995.2806153-CDS-L-elsbetiae_contig15218:3894..4047Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15218 3895..4047 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15218.3722.1

>prot_L-elsbetiae_contig15218.3722.1 ID=prot_L-elsbetiae_contig15218.3722.1|Name=mRNA_L-elsbetiae_contig15218.3722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp
LQDFPEHRLKFFRFLKAVNTHCFGTLFEIPPEHQKLVVDSVVWAFKHTER
NIAETGLEILHELLMNVGRTPAVAQAFYRQFLLSLIQSNRQYVMDFVGNL
LLSSFPNLTKAQVAGFVSGLLTSDSDLNSFKLHLRDFLVTLKEFSTEDNA
DLFLEENLAKKREDQDKARQAQLAVPGLVNPHDLPEDDMADL*
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mRNA from alignment at L-elsbetiae_contig15218:398..4047+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15218.3722.1 ID=mRNA_L-elsbetiae_contig15218.3722.1|Name=mRNA_L-elsbetiae_contig15218.3722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3650bp|location=Sequence derived from alignment at L-elsbetiae_contig15218:398..4047+ (Laminarionema elsbetiae ELsaHSoW15)
TTACAGGACTTCCCGGAACACCGGTTGAAATTCTTCCGCTTCCTGAAAGC GGTCAACACACACTGCTTCGGCACCCTCTTCGAGATACCCCCAGAGCACC AGAAGCTGGTCGTGGACAGCGTCGTCTGGGCGTTCAAGCACACCGAGCGT AACATCGGTGCGTCGTTGTGATCGCTCGGCGGTCGTGTCTTTTTTGTATT GTCTCTTGCACGGCCGAAAATAGAATACAACACCACGAGCGGGGGCGTGG ATCAGGATTATATCGAGAGAAATCAATAGTGTTTGTTTATAGCGAAACTC ATGCTTGAGTTGACAAACGCATGCACAGCAGTTCTGGATACGTATGTATG TATACAAACATATCACAAGACCCCCGCAAGATAACGCGTATCACTCACTC GTTTGTATTTTTGTTGGGCCTGTCTGACTTCCTGCCTTCCTGACTGCCTG ACTGCCTGCCTCTTCCTTTCCCCTAAGACTGGCTGCATGCTCTCGTTGTT GGCTAGGTATTTGCCTGATTTCCGAGTCCATGGCTTTTCCCACGAAAAGC GCCCTGGGTGCCATTTGTCGACGTGTGATGCGTGGCCGAGATGTTGCCGC TCCTTGTCTAGTCGGAAAGAGAGACAAACCAAGCGGCAGGCCAAATGGTG GACGTCAAGGATGGCCGATACAGCAGTAGAAGAAAAATGTCACCGCCAAC CCCCAACACACCAAAAAAGCTTGCTCTTCCCTCATTCCCCTATCCTATAT GTCAGCTTCACAGTTGGCACTGGACCTGTGGGGTGAGGTGTAGGTGGGCA GGGGTGCATGTCGTGGCAAAGTGGCGGGCGCAGCCACCGTGCCTTGAGAT GGAGATGTTGGTTACACCGGCTATGTTTTACCCCGAAGTATCCTGTTCAT GGGGCGTATGCAATAAATACTCGTTGTGTTAGCTTGTGACCACGGAAATT GACCGTGTTGAGTGACAGGATGAGTACAGAGATTGATGTTGAGACAGAAG GAGGTACTGGATAGAGACGAGACCGGGATGGTTTTTTAATGTGAAGACAA CAACAACAACAACAACAACAACAACAACAACATACATATGCCGGTACTAA TTTTCTCGCCGAGCGTGCTATGTACATGTGTGAAGCGAGGCACACGCAGG AGAGCTTTCAGCTTCAACACCAATGCACACTCTTTCCTTTTCCCCTCTCT CTTCCCCCTCACCCTTACCCCCCCCCTCCCCACACACACACACACATTTG CAGCGGAAACGGGCCTGGAGATCTTGCACGAGCTGCTGATGAACGTGGGC AGAACGCCGGCGGTGGCGCAGGCCTTCTACCGACAATTCTTGCTCTCCCT TATCCAGGTGAGTTTCATGTTGTGCGTGCGGGGCGCGATAAGAGAAGGCA CCCCATCTTGTTTTGTTTTTTTACATGTTTTATTGCCGTGACTGGCTGTG TGACTTACAACTTGGTGGCTCTACAGCTCGTGACACGCTATTCAACTGTT CATATCGCAATGACTGTGTCGTGCGTCCTGATTCGAGGGTTTTATGCTGC AGAGAGCGAGAGGGGCGAACCCCCTAAAAGGGTAGTTATGTAGCCTTTTG ATTTCGGCAAGCCACGGAGTTTTCGTCCACGTTGGGCTGGGTGCGTATTC AGAGTGTTGCCACCGGCTGCATGCAGTCCACCGGCGACGTCACATTTTCC GGCTTCGAAATGTGTTGTCTCTTTGTTTTTGATTTTTTTTGTGGGGAGCA GGACACCCTGGCGGTCATGACGGACCGGCTCCACAAGAGCGGCTTCAAGA TGCACGCCACCCTGCTGCGGCACATGTTCCAGCTGGTAGAGGCGGGGCAC GTGACGGTCGAGCTCTACGACCCCGCGCAGCAACCCGGCGTCACGGTGAG GGCAGAGAAGAGAGAAGATGCGTGGCAGAGAAAGTGTCCAATGAAAGAGG ACGGGGGGTGCGGAACAAAGAAATATAAAGAGGCGTTTGTTTTTGGAAGA AAGGGGCAGCACAGACTGTTGGGCCCGTACATTCGGTTTCCCTATGATAG AGTCTCTGTGCTTGTGCTTGGGTGCTCCGGGCCTACTTTGCGGGGGACTG CGCGGCGCACGGGAAGAGAAAAACGTCAGGGGGGGGGGGCAGCAACAACA CTCGTTGTTCGACGACGAAAATGCTGTTGTGTGAGCTGGACAGCCTACCG GTACACCCATTAATTAATTAATTAATTAATTAATTATTTCTTGTTCCTTC TTCGCCCAATGGACTCCAGTCAGCCCACACCGCCGCTGCTTGATGCTGTT AGCTGTTTGCCGAACGTGCCATGTTAACATGCCTACGCCTCGAGTAGTTC GTTGTACATGAAATACATGCCGCACGCAGAGCGCTGTGTTGGCAGTTGTA TCGCTGGTCCCCTTCTATCTACCCTTGACTTTGAACGTTTTTCACGCGTT TGCGAAAACTATTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCAAGGCNNNNNGGAAGCGCCGCTGCCC GTTGAGCGGGGGGTGGGGGGTTGCCAGATTCGTGGGCCCCCCCCCCCCCT CCCCTGCCCCCCCCCGCCCGTCCCACCCCTGTTTCCGCCCCCCCCGACCG TTTGGCGGGAAAAAAAACTCCAGAGCAACCGGCAATACGTGATGGACTTC GTGGGGAACCTTCTTCTCTCGTCGTTCCCGAACCTCACCAAGGCGCAGGT CGCCGGGTTTGTGTCGGGCCTCTTGACGTCCGACTCGGATCTCAACTCCT TCAAGCTGCACCTCAGAGACTTCCTCGTCACCCTCAAGGTGGGTGGCATT TTGTTTTTCGTCGAGGGGCCTAGTCAAGTCGAGTCAAGTCAAGAGAGATA CATGTGTTTGTACGATGATACTATTACATGTTGTTGCTTATGGCAAGTGC GGGGTGGTTTCGTCCTTCGTATGTGTGGCTGGCGTGAAATATTTTCGTAC GTACCGGTGGAATCCGTTTTTCTCGTGAGAGGTTGGTTTTGACATTTGGC TCTTAAATACCAATACCCCCGTCTTCATCTCTTGCTATTTATTGTACACC CCCTCCCAGTGCGGGAAGAGGTGATACCGAAAATCGTTTTTCATTCTACT ACCGGTGCTCTGTCTATTTATTGATTGCATTATTGTTTGTGGGTATATCT ACCTGATTCGTGTGGGTACGAAGAACGCCACAACATGAAATAAACAAAAA TTGTTTGCGTGTGCGGAGAGAAGTTGTTTTGGCATCTCATCTGTCTTACA TACCCCTCATGTATGCACTTCCATGCATCTACAATAGAAGATCGCAGATA TTTGTGTGCATCTGTGTACATTTATTGATAACGAGTGGTTTCTGAGCTCC AACCTCCAACAACAACAACCCGGTGTACATAAAACTGGCGATACCAGGAA TTCTCGACGGAAGACAACGCCGACCTCTTCCTCGAGGAGAACCTGGCCAA GAAGCGGGAGGACCAGGACAAAGCGAGACAGGCACAGCTCGCAGTACCGG GGCTGGTGAATCCGCACGACCTGCCGGAGGACGACATGGCAGACCTCTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig15218:398..4047+

>mRNA_L-elsbetiae_contig15218.3722.1 ID=mRNA_L-elsbetiae_contig15218.3722.1|Name=mRNA_L-elsbetiae_contig15218.3722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1158bp|location=Sequence derived from alignment at L-elsbetiae_contig15218:398..4047+ (Laminarionema elsbetiae ELsaHSoW15)
TTACAGGACTTCCCGGAACACCGGTTGAAATTCTTCCGCTTCCTGAAAGC
GGTCAACACACACTGCTTCGGCACCCTCTTCGAGATACCCCCAGAGCACC
AGAAGCTGGTCGTGGACAGCGTCGTCTGGGCGTTCAAGCACACCGAGCGT
AACATCGTTACAGGACTTCCCGGAACACCGGTTGAAATTCTTCCGCTTCC
TGAAAGCGGTCAACACACACTGCTTCGGCACCCTCTTCGAGATACCCCCA
GAGCACCAGAAGCTGGTCGTGGACAGCGTCGTCTGGGCGTTCAAGCACAC
CGAGCGTAACATCGCGGAAACGGGCCTGGAGATCTTGCACGAGCTGCTGA
TGAACGTGGGCAGAACGCCGGCGGTGGCGCAGGCCTTCTACCGACAATTC
TTGCTCTCCCTTATCCAGCGGAAACGGGCCTGGAGATCTTGCACGAGCTG
CTGATGAACGTGGGCAGAACGCCGGCGGTGGCGCAGGCCTTCTACCGACA
ATTCTTGCTCTCCCTTATCCAGAGCAACCGGCAATACGTGATGGACTTCG
TGGGGAACCTTCTTCTCTCGTCGTTCCCGAACCTCACCAAGGCGCAGGTC
GCCGGGTTTGTGTCGGGCCTCTTGACGTCCGACTCGGATCTCAACTCCTT
CAAGCTGCACCTCAGAGACTTCCTCGTCACCCTCAAGAGCAACCGGCAAT
ACGTGATGGACTTCGTGGGGAACCTTCTTCTCTCGTCGTTCCCGAACCTC
ACCAAGGCGCAGGTCGCCGGGTTTGTGTCGGGCCTCTTGACGTCCGACTC
GGATCTCAACTCCTTCAAGCTGCACCTCAGAGACTTCCTCGTCACCCTCA
AGGAATTCTCGACGGAAGACAACGCCGACCTCTTCCTCGAGGAGAACCTG
GCCAAGAAGCGGGAGGACCAGGACAAAGCGAGACAGGCACAGCTCGCAGT
ACCGGGGCTGGTGAATCCGCACGACCTGCCGGAGGACGACATGGCAGACC
TCTAAGAATTCTCGACGGAAGACAACGCCGACCTCTTCCTCGAGGAGAAC
CTGGCCAAGAAGCGGGAGGACCAGGACAAAGCGAGACAGGCACAGCTCGC
AGTACCGGGGCTGGTGAATCCGCACGACCTGCCGGAGGACGACATGGCAG
ACCTCTAA
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