mRNA_L-elsbetiae_contig15137.3676.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15137.3676.1 vs. uniprot
Match: A0A6H5K182_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K182_9PHAE) HSP 1 Score: 139 bits (349), Expect = 1.650e-36 Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 2 Query: 2 FRQRPQLTLLLRSLRDGLETPLERVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRPYVRLDELPLFDTLFT 226 FRQRPQLTLLLR LRDG+ETPL+RVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRP+VRLDELPLFD LFT Sbjct: 2618 FRQRPQLTLLLRCLRDGVETPLQRVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRPFVRLDELPLFDVLFT 2692
BLAST of mRNA_L-elsbetiae_contig15137.3676.1 vs. uniprot
Match: D7G8A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A9_ECTSI) HSP 1 Score: 137 bits (346), Expect = 4.190e-36 Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 2 Query: 2 FRQRPQLTLLLRSLRDGLETPLERVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRPYVRLDELPLFDTLFT 226 FRQRPQLTLLLR LRDG+ETPL+RVPCAVAVVLAKASEALA+SPGSEIYRVVNSFLLHRP+VRLDELPLFD LFT Sbjct: 1988 FRQRPQLTLLLRCLRDGVETPLQRVPCAVAVVLAKASEALAASPGSEIYRVVNSFLLHRPFVRLDELPLFDVLFT 2062
BLAST of mRNA_L-elsbetiae_contig15137.3676.1 vs. uniprot
Match: A0A0L0GCJ1_9EUKA (NopRA1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GCJ1_9EUKA) HSP 1 Score: 55.5 bits (132), Expect = 3.640e-7 Identity = 29/70 (41.43%), Postives = 45/70 (64.29%), Query Frame = 2 Query: 2 FRQRPQLTLLLRSLRDGLETPLERVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRPYVRLDELPLF 211 FR++ Q+ LL RDG+E+ +RVP + V +++A L + P +Y VN F+L RPY+ LD++PLF Sbjct: 128 FREQSQVQYLLSVFRDGIESNDQRVPTIMTVFVSEALLVLIA-PDHAMYATVNKFILQRPYLPLDDVPLF 196
BLAST of mRNA_L-elsbetiae_contig15137.3676.1 vs. uniprot
Match: L8HLC0_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HLC0_ACACA) HSP 1 Score: 54.7 bits (130), Expect = 6.980e-7 Identity = 28/73 (38.36%), Postives = 47/73 (64.38%), Query Frame = 2 Query: 2 FRQRPQLTLLLRSLRDGLETPLERVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRPYVRLDELPLFDTL 220 FR+RPQ+T LLR++R+ + +R+P +A A A+ + +P +Y+ VN+FLLHRP + L ++P+ L Sbjct: 1584 FRERPQITQLLRAVRNAMVEAFQRLPAYIASFTAHAA-LVVLTPEHGLYKPVNAFLLHRPALVLGDIPMLYEL 1655
BLAST of mRNA_L-elsbetiae_contig15137.3676.1 vs. uniprot
Match: A0A1Y1IHT2_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHT2_KLENI) HSP 1 Score: 54.7 bits (130), Expect = 7.000e-7 Identity = 28/74 (37.84%), Postives = 46/74 (62.16%), Query Frame = 2 Query: 2 FRQRPQLTLLLRSLRDGLETPLERVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRPYVRLDELPLFDTLF 223 FR++ Q+ LLL +R+ + PL+R+P A A+A+ + P +Y +N FLL RP + L+++PLF +LF Sbjct: 2315 FREKQQVRLLLHYVRNAITEPLQRIPMTSAAFAAEAA-CIQMHPEHALYGALNKFLLKRPALDLEDIPLFYSLF 2387
BLAST of mRNA_L-elsbetiae_contig15137.3676.1 vs. uniprot
Match: A0A8J5X6D7_DIALT (NopRA1 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X6D7_DIALT) HSP 1 Score: 51.2 bits (121), Expect = 1.170e-5 Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = 2 Query: 2 FRQRPQLTLLLRSLRDGL--ETPLERVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRPYVRLDELPLFDTLF 223 FR+R QL LLLR+L+DG+ P R+P AVA A+ LA+ P +Y +N LL RP++ E+P F LF Sbjct: 2905 FRERAQLELLLRALKDGVLAPPPAARLPRAVAAFAGAAASVLAN-PTHTLYARLNRELLGRPWLEHSEMPSFLQLF 2979
BLAST of mRNA_L-elsbetiae_contig15137.3676.1 vs. uniprot
Match: A0A8H3X5W0_GIGMA (Ribosome 60S biogenesis N-terminal-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A8H3X5W0_GIGMA) HSP 1 Score: 50.8 bits (120), Expect = 1.590e-5 Identity = 28/80 (35.00%), Postives = 46/80 (57.50%), Query Frame = 2 Query: 2 FRQRPQLTLLLRSL------RDGLETPLERVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRPYVRLDELPLFDTLF 223 FR++ Q+ LLL S RD L+R+P ++V +A A ++P +Y ++N FLL RP + L+++P+F LF Sbjct: 1459 FREKSQILLLLNSFKNSIVDRDNENKSLQRIPTIISVFIAHALNVF-TNPAHFMYPIINKFLLQRPILDLEDVPMFYNLF 1537
BLAST of mRNA_L-elsbetiae_contig15137.3676.1 vs. uniprot
Match: A0A433QS70_9FUNG (Uncharacterized protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QS70_9FUNG) HSP 1 Score: 50.8 bits (120), Expect = 1.600e-5 Identity = 30/81 (37.04%), Postives = 48/81 (59.26%), Query Frame = 2 Query: 2 FRQRPQLTLLLRSLR-------DGLETPLERVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRPYVRLDELPLFDTLF 223 FR++ Q+ LLL SL+ D L+ +R+P + V +A A A+ P +Y VN FLL RP++ L+++P+F +LF Sbjct: 1776 FREKKQILLLLDSLKNAITDCGDHLDPMTQRIPTIITVFVAHAF-AILLQPAHFMYPHVNRFLLQRPFIDLEDIPMFYSLF 1855
BLAST of mRNA_L-elsbetiae_contig15137.3676.1 vs. uniprot
Match: A0A433PGN9_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PGN9_9FUNG) HSP 1 Score: 50.4 bits (119), Expect = 2.180e-5 Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 2 Query: 2 FRQRPQLTLLLRSLRDGL------ETPLERVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRPYVRLDELPLFDTLF 223 FR++ Q+ LLL SL++ + + L+R+P + V +A A L P +Y VN FLL RP++ L+++P+F +LF Sbjct: 1638 FREKKQILLLLDSLKNAIADSNDKDVILQRIPTIITVFVAHALGILLQ-PAHFMYPHVNKFLLQRPFIDLEDIPMFYSLF 1716
BLAST of mRNA_L-elsbetiae_contig15137.3676.1 vs. uniprot
Match: A0A0D2WMT1_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WMT1_CAPO3) HSP 1 Score: 50.4 bits (119), Expect = 2.190e-5 Identity = 26/74 (35.14%), Postives = 46/74 (62.16%), Query Frame = 2 Query: 2 FRQRPQLTLLLRSLRDGLETPLERVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRPYVRLDELPLFDTLF 223 FR+R QL +LL SLR+ + + +++P + V+ A+ + +S +Y +N +LL RP + LD++P+F LF Sbjct: 2311 FRERTQLRVLLMSLRNAVVSRAQQLPSVLMSVVVHAARVVTNS-AHPLYATLNKYLLARPALELDDIPMFYQLF 2383 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15137.3676.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15137.3676.1 >prot_L-elsbetiae_contig15137.3676.1 ID=prot_L-elsbetiae_contig15137.3676.1|Name=mRNA_L-elsbetiae_contig15137.3676.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=76bp LPPEAAADTAAEVPPRWTGDSSGEGSLCGGGGAGEGVGGACVQSWQRDIPback to top mRNA from alignment at L-elsbetiae_contig15137:323..1351+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15137.3676.1 ID=mRNA_L-elsbetiae_contig15137.3676.1|Name=mRNA_L-elsbetiae_contig15137.3676.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1029bp|location=Sequence derived from alignment at L-elsbetiae_contig15137:323..1351+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15137:323..1351+ >mRNA_L-elsbetiae_contig15137.3676.1 ID=mRNA_L-elsbetiae_contig15137.3676.1|Name=mRNA_L-elsbetiae_contig15137.3676.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=456bp|location=Sequence derived from alignment at L-elsbetiae_contig15137:323..1351+ (Laminarionema elsbetiae ELsaHSoW15)back to top |