mRNA_L-elsbetiae_contig15084.3642.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15084.3642.1 vs. uniprot
Match: A0A6H5L2D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2D8_9PHAE) HSP 1 Score: 186 bits (472), Expect = 2.640e-57 Identity = 93/107 (86.92%), Postives = 99/107 (92.52%), Query Frame = 1 Query: 1 VREKMLYSSSKQDIRQGLGLGFFEGEYYANVLSDLTFESLVASRTSGTGDQLLSEAELLKRDLNKQERASDAGMKSSAMGVIPFKVNDDLRAQLQAFGSGEGSSDWI 321 VREKM+YS+SKQD+RQGLGLGFFEGEYYANV SDLTFESLVASR +G+GDQLLSEAELLKRDLNKQERASDAGMKS+AMGVIPFKV DLRAQLQ FGSG G DWI Sbjct: 6 VREKMIYSTSKQDVRQGLGLGFFEGEYYANVPSDLTFESLVASRRAGSGDQLLSEAELLKRDLNKQERASDAGMKSAAMGVIPFKVKGDLRAQLQTFGSGGGDVDWI 112
BLAST of mRNA_L-elsbetiae_contig15084.3642.1 vs. uniprot
Match: A0A835YV51_9STRA (ADF-H domain-containing protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV51_9STRA) HSP 1 Score: 102 bits (255), Expect = 4.690e-24 Identity = 52/107 (48.60%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 1 VREKMLYSSSKQDIRQGLGLGFFEGEYYANVLSDLTFESLVASRTSGTGDQLLSEAELLKRDLNKQERASDAGMKSSAMGVIPFKVNDDLRAQLQAFGSGEGSSDWI 321 R KMLYSSSK D+++GLGLG+F GEYYA+ S+L++ +L+ASR + LL+E E++++++ +Q R D KS+AMGVIPF+ D+LR QL+AF + G+ +W+ Sbjct: 95 TRLKMLYSSSKADVKEGLGLGYFGGEYYASEPSELSYAALLASRDTTHDGDLLTEREVIQKEMARQAR--DITAKSTAMGVIPFEATDELRRQLEAFKA--GAVNWV 197
BLAST of mRNA_L-elsbetiae_contig15084.3642.1 vs. uniprot
Match: M4BW26_HYAAE (ADF-H domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW26_HYAAE) HSP 1 Score: 86.3 bits (212), Expect = 1.180e-18 Identity = 44/107 (41.12%), Postives = 71/107 (66.36%), Query Frame = 1 Query: 1 VREKMLYSSSKQDIRQGLGLGFFEGEYYANVLSDLTFESLVASRTSGTGDQLLSEAELLKRDLNKQERASDAGMKSSAMGVIPFKVNDDLRAQLQAFGSGEGSSDWI 321 VR++MLYSSS+ +++ LGL +F GE++A LS++T+ + +A+RT D LSE+E L ++ ER D +KSSAMGV+PF++ ++R +L+ + DWI Sbjct: 93 VRDRMLYSSSRDSLKKQLGLNYFSGEFHATELSEVTWANFLAARTKHAADAPLSESERLLKEAAMLER--DTNVKSSAMGVVPFEITQNVREKLKLLQ--DDKFDWI 195
BLAST of mRNA_L-elsbetiae_contig15084.3642.1 vs. uniprot
Match: A0A225WA37_9STRA (Twinfilin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WA37_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.620e-18 Identity = 45/107 (42.06%), Postives = 71/107 (66.36%), Query Frame = 1 Query: 1 VREKMLYSSSKQDIRQGLGLGFFEGEYYANVLSDLTFESLVASRTSGTGDQLLSEAELLKRDLNKQERASDAGMKSSAMGVIPFKVNDDLRAQLQAFGSGEGSSDWI 321 VR++MLYSSS+ +++ LGL +F GE++A LS++T+ES + +R D LSE+E L ++ K ER D +KSSAMGV+PF++ ++R +L+ + DWI Sbjct: 92 VRDRMLYSSSRDSLKKQLGLNYFAGEFHATELSEVTWESFLEARKKQAADAPLSESERLLKEAAKLER--DTNVKSSAMGVVPFEITQNVRDKLRLLQ--DNKFDWI 194
BLAST of mRNA_L-elsbetiae_contig15084.3642.1 vs. uniprot
Match: K3WLI0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLI0_GLOUD) HSP 1 Score: 87.4 bits (215), Expect = 2.900e-18 Identity = 46/107 (42.99%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 1 VREKMLYSSSKQDIRQGLGLGFFEGEYYANVLSDLTFESLVASRTSGTGDQLLSEAELLKRDLNKQERASDAGMKSSAMGVIPFKVNDDLRAQLQAFGSGEGSSDWI 321 VR+KMLYSSS++ +++ LG+ +F GE++A SD+TFES ++ D LSE E L ++ ER D +KS+AMGVIPF++ ++R +L F +G DWI Sbjct: 93 VRDKMLYSSSRESLKKQLGMNYFVGEFHATETSDVTFESFQNAKKKHAADAPLSETERLLKETALLER--DTNVKSTAMGVIPFEITQNVREKLALFK--DGKFDWI 195
BLAST of mRNA_L-elsbetiae_contig15084.3642.1 vs. uniprot
Match: A0A7S3HH81_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH81_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 6.140e-18 Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 1 VREKMLYSSSKQDIRQGLGLGFFEGEYYANVLSDLTFESLVASRTSGTGDQLLSEAELLKRDLNKQERASDAGMKSSAMGVIPFKVNDDLRAQLQAFGSGEGSSDWI 321 VR+KMLYSSS++D+++ LGLGFF+ EY AN SDLT+ S +L+E+E L + +Q +A A KSSA+ V+PF + ++ QL AF EG+ +W+ Sbjct: 98 VRDKMLYSSSREDLKRSLGLGFFKSEYAANQRSDLTWSQYQHSLDRNFDADVLTESERLVLEEKQQVQAESAVSKSSALSVLPFAMTSEVTEQLNAFK--EGTCNWV 202
BLAST of mRNA_L-elsbetiae_contig15084.3642.1 vs. uniprot
Match: H3H3Q9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3Q9_PHYRM) HSP 1 Score: 85.5 bits (210), Expect = 1.990e-17 Identity = 44/107 (41.12%), Postives = 70/107 (65.42%), Query Frame = 1 Query: 1 VREKMLYSSSKQDIRQGLGLGFFEGEYYANVLSDLTFESLVASRTSGTGDQLLSEAELLKRDLNKQERASDAGMKSSAMGVIPFKVNDDLRAQLQAFGSGEGSSDWI 321 VR++MLYSSS+ +++ LGL +F GE++A LS++T+ES + +R D LSE+E L ++ ER D +KSSAMGV+PF++ ++R +L+ + DWI Sbjct: 126 VRDRMLYSSSRDSLKKQLGLNYFSGEFHATELSEVTWESFLEARKKQAADAPLSESERLLKEAAMLER--DTNVKSSAMGVVPFEITQNVRDKLRLLQ--DNKFDWI 228
BLAST of mRNA_L-elsbetiae_contig15084.3642.1 vs. uniprot
Match: A0A7R9YEV0_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEV0_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.910e-17 Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 1 VREKMLYSSSKQDIRQGLGLGFFEGEYYANVLSDLTFESLVASRTSGTGDQLLSEAELLKRDLNKQERASDAGMKSSAMGVIPFKVNDDLRAQLQAFGSGEGSSDWI 321 VR+KML+SSS+ DI+ LG F G+YYAN DL F +S+ S + L+EAE+L+++ + S K+SAMGV+PF DD + + F G S W+ Sbjct: 95 VRQKMLFSSSRDDIKSALGRALFAGDYYANSADDLKFSQYQSSQPSAAAEAPLTEAEILRKEAATADMQSSHVTKASAMGVVPFNFTDDTLSSMDDFRDGRVS--WV 199
BLAST of mRNA_L-elsbetiae_contig15084.3642.1 vs. uniprot
Match: A0A3M6VJX2_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJX2_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.960e-17 Identity = 44/107 (41.12%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 1 VREKMLYSSSKQDIRQGLGLGFFEGEYYANVLSDLTFESLVASRTSGTGDQLLSEAELLKRDLNKQERASDAGMKSSAMGVIPFKVNDDLRAQLQAFGSGEGSSDWI 321 VR++MLYSSS+ +++ LGL +F GE++A L ++T+ES + +R D LSE+E L ++ ER D +KSSAMGV+PF++ ++R +L+ E DWI Sbjct: 93 VRDRMLYSSSRDSLKKQLGLNYFSGEFHATELREVTWESFLEARKKQAADAPLSESERLLKEAAMLER--DTNVKSSAMGVVPFQITQNVRDKLRLLK--ENKFDWI 195
BLAST of mRNA_L-elsbetiae_contig15084.3642.1 vs. uniprot
Match: A0A8J5IIZ7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IIZ7_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.530e-17 Identity = 44/107 (41.12%), Postives = 70/107 (65.42%), Query Frame = 1 Query: 1 VREKMLYSSSKQDIRQGLGLGFFEGEYYANVLSDLTFESLVASRTSGTGDQLLSEAELLKRDLNKQERASDAGMKSSAMGVIPFKVNDDLRAQLQAFGSGEGSSDWI 321 VR++MLYSSS+ +++ LGL +F GE++A LS++T+ES + +R D LSE+E L ++ ER D +KSSAMGV+PF++ ++R +L+ + DWI Sbjct: 839 VRDRMLYSSSRDSLKKQLGLNYFSGEFHATELSEVTWESFLEARKKQAADAPLSESERLLKEAAMLER--DTNVKSSAMGVVPFEITQNVRDKLRLLQ--DNKFDWI 941 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15084.3642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15084.3642.1 >prot_L-elsbetiae_contig15084.3642.1 ID=prot_L-elsbetiae_contig15084.3642.1|Name=mRNA_L-elsbetiae_contig15084.3642.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=103bp MLYSSSKQDIRQGLGLGFFEGEYYANVLSDLTFESLVASRTSGTGDQLLSback to top mRNA from alignment at L-elsbetiae_contig15084:2348..3574- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15084.3642.1 ID=mRNA_L-elsbetiae_contig15084.3642.1|Name=mRNA_L-elsbetiae_contig15084.3642.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1227bp|location=Sequence derived from alignment at L-elsbetiae_contig15084:2348..3574- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15084:2348..3574- >mRNA_L-elsbetiae_contig15084.3642.1 ID=mRNA_L-elsbetiae_contig15084.3642.1|Name=mRNA_L-elsbetiae_contig15084.3642.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=618bp|location=Sequence derived from alignment at L-elsbetiae_contig15084:2348..3574- (Laminarionema elsbetiae ELsaHSoW15)back to top |