mRNA_L-elsbetiae_contig15055.3628.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 149 bits (376), Expect = 2.620e-35 Identity = 202/401 (50.37%), Postives = 246/401 (61.35%), Query Frame = 3 Query: 369 IAEVSTSEEWAQLLAVPLERAVARGNQDLAQKLVRAGTKIGNALHKAIEGGHGGITKDLLENGASVETQDRHGSSPLHIAAFNG*TEMVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----IESRKLPAGETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALY----------------------------AGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRVQKPQESTTSEHVSIAPRISSEKEVAVVEASGCKEAVGRSVVGERPSGDQWAVMARVLELQVEGIFRTIVGYL 1475 I E+ TS++ A+LL LE A A+GN+DLAQ+LVRAG +IG+ALH+A++GGH I DLLE+ AS+ D G +PL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +++++ A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AG+QG AEVV+ LLR+GADETI N G +A D +G D +EE RL ED+ RVRELL NAPADRAWRRRGYL++ RA PDRV + + ++ + + ++A R S ++A A G G S V E G+ V+++V+ LQ EGIFRTIV YL Sbjct: 5 IFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMA--RARGI---AGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 102 bits (255), Expect = 1.080e-19 Identity = 154/425 (36.24%), Postives = 189/425 (44.47%), Query Frame = 3 Query: 306 MANKDERTEALRGDERQTLGLIAEVSTSEEWAQLLAVPLERAVARGNQDLAQKLVRAGTKIGNALHKAIEGGHGGITKDLLENGASVETQDRHGSSPLHIAAFNG*TEMVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------IESRKLPA-----------------GETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALYAGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRVQKPQESTTSEHVSIAPRISSEKEVAVVEASGCKEAVGRSVVGERPSGDQWAVMARVLELQVEGIFRTIVGYL 1475 MAN+ R ALRG+E + L AE T ++WA L+ LE A RG++ L +KLV AG +IG A+H A+ GGH IT+ LLE+GAS D G +PL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + K+ A G T A AGKQG EVVD LLR GADET + +G +A D +G+ EE R+ E+ VR+LL NAPADRAWRRR L+L RA PD++Q +SS++ +A +EA RVL L EGIFRTIV ++ Sbjct: 1 MANECARG-ALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQ----------------LSSDR-IARLEA-------------------------RVLGLVEEGIFRTIVRFI 382
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 102 bits (253), Expect = 3.160e-19 Identity = 205/430 (47.67%), Postives = 244/430 (56.74%), Query Frame = 3 Query: 306 MANKDERTEALRGDERQTLGLIAEVSTSEEWAQLLAVPLERAVARGNQDLAQKLVRAGTKIGNALHKAIEGGHGGITKDLLENGASVETQDRHGSSPLHIAAFNG*TEMVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------IESRK--LPAG----------ETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALYAGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGR--LAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRVQKPQESTTSEHVSIAPRISSEKEVAVVEA--SGCKEAVGRSVVGERPSGDQW-AVMARVLELQVEGIFRTIVGYL 1475 MAN R + LRG + L L++ ST EEWA L VPLE AV G++DLA LVR G + G A+++AI G + LL+NGASV D G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX +++ K L AG TP XXXXXXXXXXXXXXXXXXXXXX A YAG+QG+AE+VD LLR GADET + +G Q D VG E G L ++ V ELL NAPADRAWRRRG L+L RA R + QE ++ R S ++A +A +GC+ E +GD+W + RV+EL+ EGIFR++VG+L Sbjct: 1 MANT--RRKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGH-CMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTP-----EGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 4.680e-17 Identity = 68/157 (43.31%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 1011 ALYAGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAH--PDRVQKPQESTTSEHVSIAPRISSEKEVAVVEASGCKEAVGRSVVGERPSGDQWAVMARVLELQVEGIFRTIVGYL 1475 A AG GTAE+VD LLR GADET ++E+G A D V + +E LAED++RVR+LL APADRAWRRRG+L+L RAH RVQ ++ + +A R S +E + E V ++G+ D ++M L IF IVGYL Sbjct: 630 AAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWA--GVVSMLMGD--GVDPISLMGDGANL----IFEKIVGYL 778
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 8.950e-15 Identity = 61/153 (39.87%), Postives = 85/153 (55.56%), Query Frame = 3 Query: 1020 AGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRVQKPQESTTSEHVSIAPRISSEKEVAVVEASGCKEAVGRSVVGERPSGDQWAVMA-RVLELQVEGIFRTIVGYL 1475 AG +G EVVD LLR ADET + G + VG E + ++ RV +LL+ AP DRAWRRRG L+L RAHP+R+ Q ++ + ++ R++ + +VE G + + +W+ M RVL L EGIFRTIVGYL Sbjct: 250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVL-RVTRSR-TKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGLD-EGIFRTIVGYL 399
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 2.530e-13 Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 1020 AGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRV 1259 AG +G EVVD LLRSGADETI++ +G A D + + E +RVR+LL NA ADRAW RR YL+L R HPDR Sbjct: 95 AGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDRA 174
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 4.650e-13 Identity = 179/416 (43.03%), Postives = 215/416 (51.68%), Query Frame = 3 Query: 330 EALRGDERQTLGLIAEVSTSEEWAQLLAVPLERAVARGNQDLAQKLVRAGTKIGN-ALHKAIEGGHGGITKDLLENGASV-ETQDRHGSSPLHIAAFNG*TEMVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------IESRKLPAGETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALYAGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRVQKPQESTTSEHVSIAPRISSEKEVAVVEASGCKEAVGRSVVGERPSGDQWAVMARVLELQVEGIFRTIVGYL 1475 E L+G+E + L L+ + E ++ LA PLE AVARG++ LAQKLV+AG KIG ALH+A+ GH I + LLENGASV + +D +G+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I++R + +G P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA ++G+ +VV LLR GADETI+ + G A D +G +D R R LL APADRAWRRRG L+L A+PDR+Q GD ++ RVL L+ G+FRTIV YL Sbjct: 17 ETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANRANAIDVLVGAGADIQARNM-SGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDD-ERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQL-------------------------------------------GGDLAGLVDRVLGLEEVGVFRTIVLYL 387
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.970e-12 Identity = 46/80 (57.50%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 1011 ALYAGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVG--IDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRA 1244 A AG+QG +VD LLR GADET +N DG A + VG I+ +DL RVR+LLENAPADRAWRRRG L+L RA Sbjct: 262 ARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 2.720e-12 Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 1026 KQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRVQ 1262 + G+A+VVD LLR GADETI+++ G A D +G + ED R R LL APADRAWRRRG L+L RAHPDR+Q Sbjct: 286 RHGSAQVVDLLLRWGADETIVSKQGETAADSIGT-RRCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQ 363
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 3.940e-12 Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 1011 ALYAGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVG--IDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRA 1244 A AG+QG +VD LLR GADET +N DG A + VG I+ +D+ RVR+LLENAP DRAWRRRG+L+L RA Sbjct: 213 ARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15055.3628.1 >prot_L-elsbetiae_contig15055.3628.1 ID=prot_L-elsbetiae_contig15055.3628.1|Name=mRNA_L-elsbetiae_contig15055.3628.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp MANKDERTEALRGDERQTLGLIAEVSTSEEWAQLLAVPLERAVARGNQDLback to top mRNA from alignment at L-elsbetiae_contig15055:46..3247+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15055.3628.1 ID=mRNA_L-elsbetiae_contig15055.3628.1|Name=mRNA_L-elsbetiae_contig15055.3628.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3202bp|location=Sequence derived from alignment at L-elsbetiae_contig15055:46..3247+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15055:46..3247+ >mRNA_L-elsbetiae_contig15055.3628.1 ID=mRNA_L-elsbetiae_contig15055.3628.1|Name=mRNA_L-elsbetiae_contig15055.3628.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=636bp|location=Sequence derived from alignment at L-elsbetiae_contig15055:46..3247+ (Laminarionema elsbetiae ELsaHSoW15)back to top |