mRNA_L-elsbetiae_contig15055.3628.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15055.3628.1
Unique NamemRNA_L-elsbetiae_contig15055.3628.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 2.620e-35
Identity = 202/401 (50.37%), Postives = 246/401 (61.35%), Query Frame = 3
Query:  369 IAEVSTSEEWAQLLAVPLERAVARGNQDLAQKLVRAGTKIGNALHKAIEGGHGGITKDLLENGASVETQDRHGSSPLHIAAFNG*TEMVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----IESRKLPAGETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALY----------------------------AGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRVQKPQESTTSEHVSIAPRISSEKEVAVVEASGCKEAVGRSVVGERPSGDQWAVMARVLELQVEGIFRTIVGYL 1475
            I E+ TS++ A+LL   LE A A+GN+DLAQ+LVRAG +IG+ALH+A++GGH  I  DLLE+ AS+   D  G +PL              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                    +++++  A    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               AG+QG AEVV+ LLR+GADETI N  G +A D +G D +EE RL ED+ RVRELL NAPADRAWRRRGYL++ RA PDRV + + ++ + + ++A R  S  ++A   A G     G S V E   G+   V+++V+ LQ EGIFRTIV YL
Sbjct:    5 IFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMA--RARGI---AGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400          
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.080e-19
Identity = 154/425 (36.24%), Postives = 189/425 (44.47%), Query Frame = 3
Query:  306 MANKDERTEALRGDERQTLGLIAEVSTSEEWAQLLAVPLERAVARGNQDLAQKLVRAGTKIGNALHKAIEGGHGGITKDLLENGASVETQDRHGSSPLHIAAFNG*TEMVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------IESRKLPA-----------------GETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALYAGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRVQKPQESTTSEHVSIAPRISSEKEVAVVEASGCKEAVGRSVVGERPSGDQWAVMARVLELQVEGIFRTIVGYL 1475
            MAN+  R  ALRG+E +   L AE  T ++WA L+   LE A  RG++ L +KLV AG +IG A+H A+ GGH  IT+ LLE+GAS    D  G +PL              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                     + K+ A                 G T                                         A  AGKQG  EVVD LLR GADET +  +G +A D +G+   EE R+ E+   VR+LL NAPADRAWRRR  L+L RA PD++Q                +SS++ +A +EA                         RVL L  EGIFRTIV ++
Sbjct:    1 MANECARG-ALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQ----------------LSSDR-IARLEA-------------------------RVLGLVEEGIFRTIVRFI 382          
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 3.160e-19
Identity = 205/430 (47.67%), Postives = 244/430 (56.74%), Query Frame = 3
Query:  306 MANKDERTEALRGDERQTLGLIAEVSTSEEWAQLLAVPLERAVARGNQDLAQKLVRAGTKIGNALHKAIEGGHGGITKDLLENGASVETQDRHGSSPLHIAAFNG*TEMVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------IESRK--LPAG----------ETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALYAGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGR--LAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRVQKPQESTTSEHVSIAPRISSEKEVAVVEA--SGCKEAVGRSVVGERPSGDQW-AVMARVLELQVEGIFRTIVGYL 1475
            MAN   R + LRG   + L L++  ST EEWA  L VPLE AV  G++DLA  LVR G + G A+++AI  G   +   LL+NGASV   D  G                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXX                       +++ K  L AG           TP               XXXXXXXXXXXXXXXXXXXXXX A YAG+QG+AE+VD LLR GADET  + +G Q  D VG    E G   L  ++  V ELL NAPADRAWRRRG L+L RA   R +  QE        ++ R  S  ++A  +A  +GC+         E  +GD+W +   RV+EL+ EGIFR++VG+L
Sbjct:    1 MANT--RRKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGH-CMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTP-----EGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422          
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 4.680e-17
Identity = 68/157 (43.31%), Postives = 90/157 (57.32%), Query Frame = 3
Query: 1011 ALYAGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAH--PDRVQKPQESTTSEHVSIAPRISSEKEVAVVEASGCKEAVGRSVVGERPSGDQWAVMARVLELQVEGIFRTIVGYL 1475
            A  AG  GTAE+VD LLR GADET ++E+G  A D V +  +E   LAED++RVR+LL  APADRAWRRRG+L+L RAH    RVQ    ++ +    +A R  S +E +  E       V   ++G+    D  ++M     L    IF  IVGYL
Sbjct:  630 AAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWA--GVVSMLMGD--GVDPISLMGDGANL----IFEKIVGYL 778          
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 8.950e-15
Identity = 61/153 (39.87%), Postives = 85/153 (55.56%), Query Frame = 3
Query: 1020 AGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRVQKPQESTTSEHVSIAPRISSEKEVAVVEASGCKEAVGRSVVGERPSGDQWAVMA-RVLELQVEGIFRTIVGYL 1475
            AG +G  EVVD LLR  ADET  +  G    + VG    E   +  ++ RV +LL+ AP DRAWRRRG L+L RAHP+R+   Q ++  +  ++  R++  +   +VE        G     +  +  +W+ M  RVL L  EGIFRTIVGYL
Sbjct:  250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVL-RVTRSR-TKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGLD-EGIFRTIVGYL 399          
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 2.530e-13
Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 3
Query: 1020 AGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRV 1259
            AG +G  EVVD LLRSGADETI++ +G  A D +  +        E  +RVR+LL NA ADRAW RR YL+L R HPDR 
Sbjct:   95 AGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDRA 174          
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 4.650e-13
Identity = 179/416 (43.03%), Postives = 215/416 (51.68%), Query Frame = 3
Query:  330 EALRGDERQTLGLIAEVSTSEEWAQLLAVPLERAVARGNQDLAQKLVRAGTKIGN-ALHKAIEGGHGGITKDLLENGASV-ETQDRHGSSPLHIAAFNG*TEMVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------IESRKLPAGETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALYAGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRVQKPQESTTSEHVSIAPRISSEKEVAVVEASGCKEAVGRSVVGERPSGDQWAVMARVLELQVEGIFRTIVGYL 1475
            E L+G+E + L L+ +     E ++ LA PLE AVARG++ LAQKLV+AG KIG  ALH+A+  GH  I + LLENGASV + +D +G+                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                  I++R + +G  P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA    ++G+ +VV  LLR GADETI+ + G  A D +G          +D  R R LL  APADRAWRRRG L+L  A+PDR+Q                                             GD   ++ RVL L+  G+FRTIV YL
Sbjct:   17 ETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANRANAIDVLVGAGADIQARNM-SGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDD-ERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQL-------------------------------------------GGDLAGLVDRVLGLEEVGVFRTIVLYL 387          
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.970e-12
Identity = 46/80 (57.50%), Postives = 54/80 (67.50%), Query Frame = 3
Query: 1011 ALYAGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVG--IDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRA 1244
            A  AG+QG   +VD LLR GADET +N DG  A + VG  I+        +DL RVR+LLENAPADRAWRRRG L+L RA
Sbjct:  262 ARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341          
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 2.720e-12
Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 3
Query: 1026 KQGTAEVVDFLLRSGADETIINEDGFQAKDFVGIDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRAHPDRVQ 1262
            + G+A+VVD LLR GADETI+++ G  A D +G   +      ED  R R LL  APADRAWRRRG L+L RAHPDR+Q
Sbjct:  286 RHGSAQVVDLLLRWGADETIVSKQGETAADSIGT-RRCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQ 363          
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 3.940e-12
Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = 3
Query: 1011 ALYAGKQGTAEVVDFLLRSGADETIINEDGFQAKDFVG--IDAQEEGRLAEDLNRVRELLENAPADRAWRRRGYLMLLRA 1244
            A  AG+QG   +VD LLR GADET +N DG  A + VG  I+        +D+ RVR+LLENAP DRAWRRRG+L+L RA
Sbjct:  213 ARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15055.3628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE2.620e-3550.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI1.080e-1936.24Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7FYD0_ECTSI3.160e-1947.67Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5JHY9_9PHAE4.680e-1743.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G981_ECTSI8.950e-1539.87Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JMJ6_9PHAE2.530e-1353.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G137_ECTSI4.650e-1343.03Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNU3_9PHAE1.970e-1257.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1U1_ECTSI2.720e-1255.70Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G6X8_ECTSI3.940e-1255.00Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15055contigL-elsbetiae_contig15055:46..3247 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score91.3
Seed ortholog evalue3e-16
Seed eggNOG ortholog2880.D8LL12
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons2
Model size2535
Cds size318
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15055.3628.1prot_L-elsbetiae_contig15055.3628.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15055 351..668 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815610.9585197-UTR-L-elsbetiae_contig15055:45..3501622815610.9585197-UTR-L-elsbetiae_contig15055:45..350Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15055 46..350 +
1691682990.088826-UTR-L-elsbetiae_contig15055:45..3501691682990.088826-UTR-L-elsbetiae_contig15055:45..350Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15055 46..350 +
1622815610.983704-UTR-L-elsbetiae_contig15055:668..15281622815610.983704-UTR-L-elsbetiae_contig15055:668..1528Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15055 669..1528 +
1691682990.1104438-UTR-L-elsbetiae_contig15055:668..15281691682990.1104438-UTR-L-elsbetiae_contig15055:668..1528Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15055 669..1528 +
1622815611.0071933-UTR-L-elsbetiae_contig15055:2195..32471622815611.0071933-UTR-L-elsbetiae_contig15055:2195..3247Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15055 2196..3247 +
1691682990.1213515-UTR-L-elsbetiae_contig15055:2195..32471691682990.1213515-UTR-L-elsbetiae_contig15055:2195..3247Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15055 2196..3247 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815610.9697638-CDS-L-elsbetiae_contig15055:350..6681622815610.9697638-CDS-L-elsbetiae_contig15055:350..668Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15055 351..668 +
1691682990.1007595-CDS-L-elsbetiae_contig15055:350..6681691682990.1007595-CDS-L-elsbetiae_contig15055:350..668Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15055 351..668 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15055.3628.1

>prot_L-elsbetiae_contig15055.3628.1 ID=prot_L-elsbetiae_contig15055.3628.1|Name=mRNA_L-elsbetiae_contig15055.3628.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp
MANKDERTEALRGDERQTLGLIAEVSTSEEWAQLLAVPLERAVARGNQDL
AQKLVRAGTKIGNALHKAIEGGHGGITKDLLENGASVETQDRHGSSPLHI
AAFNG*
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mRNA from alignment at L-elsbetiae_contig15055:46..3247+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15055.3628.1 ID=mRNA_L-elsbetiae_contig15055.3628.1|Name=mRNA_L-elsbetiae_contig15055.3628.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3202bp|location=Sequence derived from alignment at L-elsbetiae_contig15055:46..3247+ (Laminarionema elsbetiae ELsaHSoW15)
GATTGACAGTTCTGCAATTAAAAATATCCAATCAGATGTTCTACCGCAGC TCAGGCGATACATAAGGCCGCTACCACGAACAACAGCCGCGCGCGCAAGA CAGTTCACATCTACAGTCCGGATACCTCTGTCTTTGTTCGCAGAGGCCAG GTCGATTGTCCCTGTGCAGCAGTGGTTATTACCCTTATTACGAAGTATTA CGGGCCCGCCGCTTTCACACGTGGACCCGCTCGCGTCACTCTCACGACAG CCAGGCACACCTTCTCGCCGCGGCGGCTACAGCAGGAGACAACACGGCAG GCGCTATGGCTAACAAGGACGAGCGAACAGAAGCACTTCGGGGTGACGAA AGGCAAACGTTAGGCCTGATCGCAGAAGTCTCGACATCGGAAGAGTGGGC GCAGCTGCTAGCAGTTCCGCTCGAGCGTGCCGTTGCCCGAGGCAATCAGG ACCTCGCACAGAAGCTGGTGCGGGCAGGCACAAAGATCGGGAATGCACTG CATAAAGCTATTGAAGGCGGGCATGGAGGGATTACCAAAGACCTACTGGA GAATGGAGCCTCTGTCGAGACCCAGGATAGGCATGGCAGCAGTCCCCTTC ACATCGCCGCATTCAACGGGTAAACGGAGATGGTGCAGCTGCTGATGCTC AGGGGGGCTGCCAAAGACGCGTTGGACGACTACGCGCGAACGCCACTCTT TATTGCAGTCAAAAACGATAACATCGCTGTAGCACTAGCTCTCCTGGCTG GTGGGGCGGACGTGAACGCGTCTGACTGCTTGTAAACGACAGCTCTTCAT GTTGCCGCGAATCGAAATTCGTCGGAGGCGATTAATGTACTCTTGGGGGC TGGGGCTAACATCGAATCACGGAAACTACCTGCTGGTGAAACGCCTCTTC ACAAAGCTGCTTCCAGCCGTAAGCTCGAAGCCTTAACCGCCCTCTTGAAG CATGGTGCGGACGTTAATGCCCCGACACACGTTGACGGCGATACGTCTTT GCATCTTGCAGCCCTCTACGCCGGAAAACAAGGAACCGCCGAGGTGGTAG ACTTTTTGCTGAGGTCAGGTGCGGACGAGACGATCATCAACGAGGATGGC TTCCAAGCGAAGGATTTTGTCGGCATCGATGCCCAAGAAGAAGGCCGTCT TGCCGAGGACTTGAACCGCGTCCGCGAGCTGCTGGAGAACGCTCCGGCCG ACAGGGCATGGCGTCGCCGAGGCTACCTGATGCTGCTCCGTGCTCACCCC GACAGAGTGCAAAAGCCACAGGAGAGTACCACCAGCGAACATGTCAGCAT CGCACCGAGGATAAGCAGCGAAAAAGAAGTCGCAGTGGTAGAGGCAAGCG GCTGCAAAGAGGCTGTCGGAAGAAGCGTGGTTGGTGAGAGACCTAGCGGT GATCAGTGGGCTGTGATGGCGAGGGTGCTGGAGTTGCAGGTAGAGGGCAT ATTCCGGACGATCGTGGGGTACCTGTGAAGCCGGTGAGTGGTAGCACCTT ATAGTATTAAGCAAGCCCTCGATGATGCGCGTGCCGGAATTGGTGTCACG TTAAAGTACATTCAGGAACAGACTCGACGCGACAGGATACCCCTAGTAGT ATTAAACCAGACAGCTATCGCGTAGTAAGACTCACTTTTCAGATACACGA AGTACAAGTATCGGGTTAATTATATATTATCGTCGTCATCGACGGTCATA CAACTCGAAAACACAATGGGTATGATTTTGTTTTGCTTGCACAGTCTGTC TGATGTTAAATATCACATTTTCAGCCAGAGTTCACGGCAAACATGATTGT TTTCATCCAATGCGTACACATACATTTCTTAGACACGCCAATAGATCGTA GTCGGCTGGTGTTGCGTACTGGTAGAATTTTCGATCAACAATGTACCGCA CCCTGACCGATGGCAGTTTCATCATGTCCACAGCAGTTTTTTTGTAGTTT TCGTCACGTTGTTGAACTCGATGCGTTTGTTTTTGTGCCATTGCTGAGCT GGCTCGGCAGACAGGGAATTTGTAGTAGACCTTTTCGCTGCATGTCCCTT CCCCACCATCCCGATGTTGCCTTTTGCATGTCTCGCATGTCTCGAATGTT CGTGAACCCCTTTCCTACTTTTCCTCCCTTTTGCTGTGCTCTCTCAACAG CAGGATGCGTATTTTTGAACCCGAGTAGATCAGGCGAATCAGCGGATCCA GGTCCGCGCGAAGCCAGGATGGGGACTAAGATCATTTTTGTCGTGTGGGT GCGATACATAGCTGGAGAACGCGGTTGGTTGTGGTGCTCGTCTTAAAGTA TGAGGCGTGAACGGCTGACTGAAAGCGCCATCGGTGCTTTAACTACTTTT TTCTTTTTTCTGCGTAGCACCGCAGTAGTATTCTAGGAGCTGCTTGCTAT ATTGAGTGTTCGAGTGCGCCGGACGAGTGCAGTAGATCGAATAAGAACCG CGTGAGTGTATGCAGCAAGAAGTTGGACAGAGCAGTGCATGTTACACGAG CACGATTTAGGAGCGCTTTATGCGACTTCACAACAACAGTGGTCGGGTGG GTGCGGGATGCGGGGGTGTTTTCGGAATCCCCCATTGTTACTACACCGTA CAAGAGGCCAGTGCAGGTGTTTCGATGCCCGCTCGTCGGTAGCCAACGAC ACGTTGGAGGTGGGCTTTTTTTTATGAGTATAAAATCAGGTGTTGGAGTT TTAGTGGTACCTAACGGGCGCTAGTGTTATACCGGGTTATTACCCCGAGG TAGAGCGTGGTGTCTTGCTTTGTCATCTGCTGTGACTGATACTCCGAAGT ATAACTATGTCATATTTTGCCCGCGATTCAGGGGTTTTGTTTCGCGAGAT GCCGTATGCCGTAGGCATGTTGGGGTTCCACCCTCGTCGGCTTTTGTTGC CAGATCAAAACGCGTGTGCCGGTAGTCTGAGTTTTGTATATTTTTCAATA TGACGTTTGTGCCAGATCATCAGTCGAAAGTTCTTCTCGTGTTTGGTAGA TTTTTCCCTGCAGTATGATATGGCAACGATTACGAACTTGTCGTTCATTA TTCCAATGATAATTCTACAGACAAACTTGGTTGATAGATTGTGGGCATGA CACCCAGGAACTCACTTTGCTATGTCTTTACGCATGCGAGGAAAATACGT CGTTCGCACGGAAGTGTGAAATGATTGTATTGCTTCATTTTTATGTTGAC GA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig15055:46..3247+

>mRNA_L-elsbetiae_contig15055.3628.1 ID=mRNA_L-elsbetiae_contig15055.3628.1|Name=mRNA_L-elsbetiae_contig15055.3628.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=636bp|location=Sequence derived from alignment at L-elsbetiae_contig15055:46..3247+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTAACAAGGACGAGCGAACAGAAGCACTTCGGGGTGACGAAAGGCA
AACGTTAGGCCTGATCGCAGAAGTCTCGACATCGGAAGAGTGGGCGCAGC
TGCTAGCAGTTCCGCTCGAGCGTGCCGTTGCCCGAGGCAATCAGGACCTC
GCACAGAAGCTGGTGCGGGCAGGCACAAAGATCGGGAATGCACTGCATAA
AGCTATTGAAGGCGGGCATGGAGGGATTACCAAAGACCTACTGGAGAATG
GAGCCTCTGTCGAGACCCAGGATAGGCATGGCAGCAGTCCCCTTCACATC
GCCGCATTCAACGGGTAAATGGCTAACAAGGACGAGCGAACAGAAGCACT
TCGGGGTGACGAAAGGCAAACGTTAGGCCTGATCGCAGAAGTCTCGACAT
CGGAAGAGTGGGCGCAGCTGCTAGCAGTTCCGCTCGAGCGTGCCGTTGCC
CGAGGCAATCAGGACCTCGCACAGAAGCTGGTGCGGGCAGGCACAAAGAT
CGGGAATGCACTGCATAAAGCTATTGAAGGCGGGCATGGAGGGATTACCA
AAGACCTACTGGAGAATGGAGCCTCTGTCGAGACCCAGGATAGGCATGGC
AGCAGTCCCCTTCACATCGCCGCATTCAACGGGTAA
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