mRNA_L-elsbetiae_contig1503.3613.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1503.3613.1 vs. uniprot
Match: D7FS69_ECTSI (Vps16_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS69_ECTSI) HSP 1 Score: 116 bits (290), Expect = 8.110e-31 Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 1 Query: 1 MLADDWTSLRDVQYRKIHLYDLDWAGDEDRQLDRCLVAVAKYGGAVAMVRDETKLLKVRA 180 MLADDWT+LRDVQYRKIHLYDLDWA DEDR LDRCLVAVAKYGGAVAMVRDETKLLK+ A Sbjct: 1 MLADDWTTLRDVQYRKIHLYDLDWAEDEDRHLDRCLVAVAKYGGAVAMVRDETKLLKMSA 60
BLAST of mRNA_L-elsbetiae_contig1503.3613.1 vs. uniprot
Match: A0A6V1U1E5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U1E5_HETAK) HSP 1 Score: 57.8 bits (138), Expect = 9.170e-9 Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 1 Query: 1 MLADDWTSLRDVQYRKIHLYD-LDWAGDEDRQLDRCLVAVAKYGGAVAMVRDETKLLK 171 M+ DW SL DVQYRK +YD ++W GD D LD C++ A YGG +A+VRDE KL++ Sbjct: 1 MINTDWQSLGDVQYRKWVVYDEMEW-GDFD--LDSCIICGAPYGGPLAVVRDEKKLVE 55
BLAST of mRNA_L-elsbetiae_contig1503.3613.1 vs. uniprot
Match: A0A6P4XUS8_BRABE (Vacuolar protein sorting-associated protein 16 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XUS8_BRABE) HSP 1 Score: 58.5 bits (140), Expect = 1.680e-8 Identity = 29/60 (48.33%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 4 LADDWTSLRDVQYRKIHLYDLDWAGDEDRQLDRCLVAVAKYGGAVAMVRDETKLLKVRAS 183 + DW L V YRK +Y L W D LD+ +VA A YGG VA++RDETKL++V+ S Sbjct: 4 VTGDWNPLGQVFYRKQEIYTLGW---RDIDLDKFVVAAAPYGGPVALIRDETKLVRVQGS 60
BLAST of mRNA_L-elsbetiae_contig1503.3613.1 vs. uniprot
Match: C3ZIW0_BRAFL (Vacuolar protein sorting-associated protein 16 homolog n=6 Tax=Branchiostoma TaxID=7737 RepID=C3ZIW0_BRAFL) HSP 1 Score: 57.8 bits (138), Expect = 3.140e-8 Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 4 LADDWTSLRDVQYRKIHLYDLDWAGDEDRQLDRCLVAVAKYGGAVAMVRDETKLLKVRAS 183 + DW L V YRK +Y + W D LD+ +VA A YGG +A++RDETKL++V+ S Sbjct: 4 VTGDWNPLGQVFYRKQEIYSMGW---RDIDLDKFVVAAAPYGGPIALIRDETKLVRVQGS 60
BLAST of mRNA_L-elsbetiae_contig1503.3613.1 vs. uniprot
Match: A0A8J9Z1U9_BRALA (VPS16 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9Z1U9_BRALA) HSP 1 Score: 57.8 bits (138), Expect = 3.180e-8 Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 4 LADDWTSLRDVQYRKIHLYDLDWAGDEDRQLDRCLVAVAKYGGAVAMVRDETKLLKVRAS 183 + DW L V YRK +Y + W D LD+ +VA A YGG +A++RDETKL++V+ S Sbjct: 4 VTGDWNPLGQVFYRKQEIYSMGW---RDIDLDKFVVAAAPYGGPIALIRDETKLVRVQGS 60
BLAST of mRNA_L-elsbetiae_contig1503.3613.1 vs. uniprot
Match: A0A7M7MZQ0_STRPU (Vacuolar protein sorting-associated protein 16 homolog n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7MZQ0_STRPU) HSP 1 Score: 54.7 bits (130), Expect = 3.850e-7 Identity = 26/60 (43.33%), Postives = 36/60 (60.00%), Query Frame = 1 Query: 4 LADDWTSLRDVQYRKIHLYDLDWAGDEDRQLDRCLVAVAKYGGAVAMVRDETKLLKVRAS 183 + DW L DV YRK+ LY +D E L + VAVA +GG +A++RD K+ +VR S Sbjct: 4 VTGDWNPLGDVFYRKVELYSMDRLWQEVADLRKFKVAVAPFGGPIALMRDSNKITQVRGS 63
BLAST of mRNA_L-elsbetiae_contig1503.3613.1 vs. uniprot
Match: UPI0014259083 (vacuolar protein sorting-associated protein 16 homolog n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014259083) HSP 1 Score: 53.5 bits (127), Expect = 9.850e-7 Identity = 23/57 (40.35%), Postives = 36/57 (63.16%), Query Frame = 1 Query: 13 DWTSLRDVQYRKIHLYDLDWAGDEDRQLDRCLVAVAKYGGAVAMVRDETKLLKVRAS 183 DW + +V +RK LY +D E L + +A A YGG +A++RD+TK+L+V+ S Sbjct: 7 DWNPMGEVYFRKSELYSMDRKWQEIADLKKFKIAAAPYGGPIALIRDDTKILQVKGS 63
BLAST of mRNA_L-elsbetiae_contig1503.3613.1 vs. uniprot
Match: A0A3A2Z9H0_9EURO (Probable vacuolar protein sorting-associated protein 16 homolog n=1 Tax=Aspergillus sclerotialis TaxID=2070753 RepID=A0A3A2Z9H0_9EURO) HSP 1 Score: 53.1 bits (126), Expect = 1.350e-6 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 1 Query: 13 DWTSLRDVQYRKIHLYDLDWAGDEDRQLDRCLVAVAKYGGAVAMVRDETKLLKVRAS 183 +W + D YRKI +YD + DED +L+ +VA A YGGA+A++RDE+KL + +AS Sbjct: 9 NWEKVGDSFYRKIPVYDAIF--DEDVELENYIVAGAPYGGAIALLRDESKLYRYQAS 63
BLAST of mRNA_L-elsbetiae_contig1503.3613.1 vs. uniprot
Match: A9TG46_PHYPA (Protein VACUOLELESS1 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TG46_PHYPA) HSP 1 Score: 52.8 bits (125), Expect = 1.840e-6 Identity = 25/59 (42.37%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 4 LADDWTSLRDVQYRKIHLYDLDWAGDEDRQLDRCLVAVAKYGGAVAMVRDETKLLKVRA 180 +A +W +L + YRK+ +Y + W G + L R VA A++GG +AMVRDE+K++++RA Sbjct: 5 IAAEWEALYNRYYRKLEVYTMCWNGID---LSRHKVACARFGGPIAMVRDESKMVQLRA 60
BLAST of mRNA_L-elsbetiae_contig1503.3613.1 vs. uniprot
Match: A0A6A7G8V0_9CRUS (Vacuolar protein sorting-associated protein 16 homolog (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G8V0_9CRUS) HSP 1 Score: 52.0 bits (123), Expect = 3.420e-6 Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = 1 Query: 1 MLADDWTSLRDVQYRKIHLYDLDWAGDEDRQLDRCLVAVAKYGGAVAMVRDETKLLKVRAS 183 M DW L YRK +Y++ W +D L++ ++A A +GG +A+VRDE K+L V AS Sbjct: 1 MATSDWNQLNKCYYRKRRIYEMRW---DDVDLEKYVIAGACFGGPIALVRDERKILLVGAS 58 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1503.3613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1503.3613.1 >prot_L-elsbetiae_contig1503.3613.1 ID=prot_L-elsbetiae_contig1503.3613.1|Name=mRNA_L-elsbetiae_contig1503.3613.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=61bp MLADDWTSLRDVQYRKIHLYDLDWAGDEDRQLDRCLVAVAKYGGAVAMVRback to top mRNA from alignment at L-elsbetiae_contig1503:264..446- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1503.3613.1 ID=mRNA_L-elsbetiae_contig1503.3613.1|Name=mRNA_L-elsbetiae_contig1503.3613.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=183bp|location=Sequence derived from alignment at L-elsbetiae_contig1503:264..446- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1503:264..446- >mRNA_L-elsbetiae_contig1503.3613.1 ID=mRNA_L-elsbetiae_contig1503.3613.1|Name=mRNA_L-elsbetiae_contig1503.3613.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=366bp|location=Sequence derived from alignment at L-elsbetiae_contig1503:264..446- (Laminarionema elsbetiae ELsaHSoW15)back to top |