mRNA_L-elsbetiae_contig15029.3612.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15029.3612.1 vs. uniprot
Match: D7G660_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G660_ECTSI) HSP 1 Score: 416 bits (1070), Expect = 3.800e-135 Identity = 290/605 (47.93%), Postives = 340/605 (56.20%), Query Frame = 1 Query: 1 GVFYVGLFAGFSLSLGGGTLIDDLLGWRWAYRLAATAGFVAAVITYATVQEPKKPLGLLRQRRGYSAASAAVSTKNPVAGGGDATGGGGXXSXXXXXXXXXXXXXXXXGFRHVSSPTYSLVRREEEGREGTKPTMREYGYGE---TAGS-----ESKEDRSAGAEAGVVGAASLEDGQK----------------------------------------GLQQQLXXXXXXXXXXXLLNGSLHRPAGGA--------SGGKMQDLSEAWLGSPSLLLICLAGGIRDAGGFVFSYYLASYFSPLMDGNAMLTSDGS--CSSSYDASFNGTQICDESYPWCVDGSCNTLSSSPWHDIGMPASHLELFVSWVPLVGGSLGAMMGGILSDRIAKRHGTAGRLWVVVVSNAIATPFAVGVLVAPYPWCFLCLLMVSLIGEMWIGIMVTCIMTLVPRHVRVTSVALYNFFITNLSGLCTLLVPPIRARYDSPHIFSFFAEPLAGAAAAXXXXXXXXXXXXXXXXXXLPGASTGXXXXXXXXXXGSLPSLPLHGLLGEGASVVGYDDGGGLGXXXXXXXAGGPVEFRLAAPGSTGLRVAMMWIYPGLFLASS 1641 GV+YVGL+AGFSL+LG GTL+DDL+GW+W+Y LAA AG V A +T+ TV EP P + XX XXXXXXXXXXXXXXXX VSSP YSLV RE GR+ + R GYG GS AG E + GL Q XXXXXXXXXX RP + S GK+ DLS AWL SPSLLL+C+AGG+RDAGGFVF YYLASYFSPL+DGN LT G CSSSYD + QICDE+YPWCV+GSC L+SSPWHD+GMPA LE F+SWVPLVGGSLGAM+GG LSDR+A+R GTAGRLWVV+VSNA+A+PFAVGVL+APYPWCFLCLL V L+GEMWIG+++ ++ LVPRHVR+TSVALYNF ITN+SGL T LVP IR RYDS H FSFF EPL+ G L GL G +V A GPVE ++ GS GL+ A++W+YPG++LASS Sbjct: 116 GVYYVGLYAGFSLALGAGTLVDDLVGWKWSYLLAALAGAVVAALTFLTVPEPLPPREAVLMXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXSRSAVSSPVYSLVGREGRGRDSLSASARGGGYGSDRPAVGSGXXXXXXXXXXKAGTEPTWLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGLQRGXXXXXXXXXXXXXXXXXRPRRSSAYSRLLHRSRGKLSDLSAAWLDSPSLLLVCVAGGVRDAGGFVFGYYLASYFSPLLDGNPSLTQHGDDPCSSSYDVGYADDQICDEAYPWCVEGSCFRLTSSPWHDVGMPAHQLECFISWVPLVGGSLGAMIGGFLSDRVAQRLGTAGRLWVVIVSNALASPFAVGVLLAPYPWCFLCLLGVELLGEMWIGVVLAVVIALVPRHVRITSVALYNFIITNISGLSTTLVPLIRGRYDSEHTFSFFVEPLSAGGEGDA---------------------------------GRLLLSSPSGLAEAGTAVA-------------AAAAEGPVEVSVSEAGSHGLQAALLWMYPGMYLASS 666
BLAST of mRNA_L-elsbetiae_contig15029.3612.1 vs. uniprot
Match: A0A6H5L2A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A6_9PHAE) HSP 1 Score: 402 bits (1034), Expect = 2.390e-127 Identity = 298/627 (47.53%), Postives = 350/627 (55.82%), Query Frame = 1 Query: 1 GVFYVGLFAGFSLSLGGGTLIDDLLGWRWAYRLAATAGFVAAVITYATVQEPKKPLGLLRQRRGYSAASAAVSTKNPVAGGGDATGGGGXXSXXXXXXXXXXXXXXXXGFRHVSSPTYSLVRREEEGREGTKPTMREYGYGETAGSESKEDRSAGAEAG------------------------------------------------------------------------------VVGAASLEDGQKGLQQQLXXXXXXXXXXXLLNGSLHRPAGGASGGKMQDLSEAWLGSPSLLLICLAGGIRDAGGFVFSYYLASYFSPLMDGNAMLTSDGS--CSSSYDASFNGTQICDESYPWCVDGSCNTLSSSPWHDIGMPASHLELFVSWVPLVGGSLGAMMGGILSDRIAKRHGTAGRLWVVVVSNAIATPFAVGVLVAPYPWCFLCLLMVSLIGEMWIGIMVTCIMTLVPRHVRVTSVALYNFFITNLSGLCTLLVPPIRARYDSPHIFSFFAEPLAGAAAAXXXXXXXXXXXXXXXXXXLPGASTGXXXXXXXXXXGSLPSLPLHGLLGEGASVVGYDDGGGLGXXXXXXXAGGPVEFRLAAPGSTGLRVAMMWIYPGLFLASS 1641 GV+YVGL+AGFSL+LGGGTL+DDL+GW+W+Y LAA AG V A +T+ TV EP X XXXXXXXXXXXXXXXX VSSP YS+V RE GR+ + R GYG DR A G XXX + LHR S GK+ DLS AWL SPSLLL+C+AGG+RDAGGFVF YYLASYFSPL+DGN LT G CS+SYD + G QICDE+YPWCV+GSC L+SSPWHD+GMPA HLE F+SWVP+VGGSLGAM+GG LSDR+A+R GTAGRLWVV+VSNA+A+PFAVGVL+APYPWCF+CLL V L+GEMWIG+++ ++ LVPR VR+TSVA+YNF ITN+SGL T LVP IR RYDS H FSF EPLAGAA XXXXXXXXXXXXXXXXXX S G + GL XXXXA GPVE ++ GS GL+ A++W+YPG++LASS Sbjct: 156 GVYYVGLYAGFSLALGGGTLVDDLVGWKWSYLLAALAGAVVAALTFLTVPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXSRPAVSSPVYSMVGREGRGRDSLSASARGEGYGS--------DRPAVGSGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLQPRRSSAYSRLLHR-----SQGKLSDLSAAWLDSPSLLLVCVAGGVRDAGGFVFGYYLASYFSPLLDGNPSLTQHGDDPCSASYDVGYAGDQICDEAYPWCVEGSCFRLTSSPWHDVGMPAHHLECFISWVPVVGGSLGAMIGGFLSDRVAQRLGTAGRLWVVIVSNALASPFAVGVLLAPYPWCFVCLLGVELLGEMWIGVVLAVVIALVPRQVRITSVAMYNFIITNISGLSTTLVPLIRGRYDSEHTFSFLVEPLAGAAXXXXXXXXXXXXXXXXXXXXXXXXS------------GRMLLSSPSGLAEXXXXXX------------XXXXAEGPVEVSVSEAGSHGLQAALLWMYPGMYLASS 738
BLAST of mRNA_L-elsbetiae_contig15029.3612.1 vs. uniprot
Match: A0A7S3XVU0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVU0_HETAK) HSP 1 Score: 174 bits (441), Expect = 6.720e-46 Identity = 94/243 (38.68%), Postives = 136/243 (55.97%), Query Frame = 1 Query: 610 GKMQDLSEA------WLGSPSLLLICLAGGIRDAGGFVFSYYLASYFSPLMDGNAMLTSDGSCSSSYDASF---NGTQICDESYPWCVDGSCNTLSSSPWHDIGMPASHLELFVSWVPLVGGSLGAMMGGILSDRIAKRHGTAGRLWVVVVSNAIATPFAVGVLVAPYPWCFLCLLMVSLIGEMWIGIMVTCIMTLVPRHVRVTSVALYNFFITNLSGLCTLLVPPIRARYDSPHIFSFFAEP 1311 G M DL+ W +P+L + +A G R+AGG ++ Y A +F L L D SCS SYDA N + C SYP+C+DG CN L+S+PWH +GMP+++ + V + GGSLG+++ G+ SD+ AK++G GR+ + V I+ PF G +V YP+CF+ + GE W G+++TCIM VP H R TSV L + L T+LVP A +D + F+A P Sbjct: 1 GTMSDLAHLKEVIAFWNQNPALWIFVIAAGFRNAGGSIWQSYQALFFDDLFS----LELDSSCSYSYDAEDSENNSVESCSSSYPYCIDGFCNALNSTPWHAVGMPSNYFAQWTFVVIIFGGSLGSLLNGVASDKAAKKNGLIGRINTLSVFILISVPFCFGAVVFEYPYCFMSSFLCYAFGEGWQGVVLTCIMEFVPGHYRATSVGLGMAVVALLGSSATVLVPWFEAMFDHYSTYEFYAAP 239
BLAST of mRNA_L-elsbetiae_contig15029.3612.1 vs. uniprot
Match: W5MAW6_LEPOC (D-galactonate transporter-like n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MAW6_LEPOC) HSP 1 Score: 143 bits (360), Expect = 2.320e-33 Identity = 79/211 (37.44%), Postives = 113/211 (53.55%), Query Frame = 1 Query: 646 SPSLLLICLAGGIRDAGGFVFSYYLASYFSPLMDGNAMLTSDGSCSSSYDASFNGTQICDESYPWCVDGSCNTLSSSPWHDIGMPASHLELFVSWVPLVGGSLGAMMGGILSDRIAKRHGTAGRLWVVVVSNAIATPFAVGVLVAPYPWCFLCLLMVSLIGEMWIGIMVTCIMTLVPRHVRVTSVALYNFFITNLSGLCTLLVPPIRARYD 1278 S SLLL+CLAG +R+AGG+V++Y +YF+ P DIG ++SW+PLVGGS G + GG +SDR+ ++ G R+WV+VVS +A PF +GVL+ P P+CFL L+ ++IGEMW+G+ + ++ LVP VR +SVA Y F ITN+ G LLVP + Y+ Sbjct: 281 SLSLLLLCLAGSVRNAGGYVWAYNAQNYFNLYF--------------------------------------------PNEDIGR-------WLSWIPLVGGSFGVVFGGFISDRVVRKRGLTARIWVLVVSQILAAPFLIGVLILPPPYCFLLLIPANIIGEMWVGVALAILVELVPSAVRTSSVAFYLFIITNIGGNAPLLVPLLAKLYN 440
BLAST of mRNA_L-elsbetiae_contig15029.3612.1 vs. uniprot
Match: A0A444V2G1_ACIRT (Protein spinster-like 1 n=3 Tax=Acipenseroidei TaxID=186622 RepID=A0A444V2G1_ACIRT) HSP 1 Score: 142 bits (358), Expect = 4.100e-33 Identity = 79/210 (37.62%), Postives = 111/210 (52.86%), Query Frame = 1 Query: 646 SPSLLLICLAGGIRDAGGFVFSYYLASYFSPLMDGNAMLTSDGSCSSSYDASFNGTQICDESYPWCVDGSCNTLSSSPWHDIGMPASHLELFVSWVPLVGGSLGAMMGGILSDRIAKRHGTAGRLWVVVVSNAIATPFAVGVLVAPYPWCFLCLLMVSLIGEMWIGIMVTCIMTLVPRHVRVTSVALYNFFITNLSGLCTLLVPPIRARY 1275 SPSLLL+CLAG IR+AGG+V++Y YFS P D+G ++SW+PLVGGS G + GG +SDR+ K+ G R+WV+V+S +A PF VGVL P+ FL L+ ++IGEMW+G+ + ++ LVP +R ++VA Y F ITN+ G LLVPP+ + Y Sbjct: 277 SPSLLLLCLAGSIRNAGGYVWAYNAQIYFSQYF--------------------------------------------PGEDVGC-------WLSWIPLVGGSFGVLFGGFISDRVVKKRGLPARVWVLVISQIVAAPFLVGVLWLSPPYAFLLLIPANIIGEMWVGVTLAIVVELVPPVIRTSAVAFYLFIITNIGGNMPLLVPPLTSLY 435
BLAST of mRNA_L-elsbetiae_contig15029.3612.1 vs. uniprot
Match: A0A7D9LGT6_PARCT (Spinster homolog 1-like n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LGT6_PARCT) HSP 1 Score: 135 bits (341), Expect = 4.950e-33 Identity = 77/222 (34.68%), Postives = 114/222 (51.35%), Query Frame = 1 Query: 646 SPSLLLICLAGGIRDAGGFVFSYYLASYFSPLMDGNAMLTSDGSCSSSYDASFNGTQICDESYPWCVDGSCNTLSSSPWHDIGMPASHLELFVSWVPLVGGSLGAMMGGILSDRIAKRHGTAGRLWVVVVSNAIATPFAVGVLVAPYPWCFLCLLMVSLIGEMWIGIMVTCIMTLVPRHVRVTSVALYNFFITNLSGLCTLLVPPIRARYDSPHIFSFFAEP 1311 SPSLL++CLAG IR+AGG+V++Y YF E Y P +L ++SW+PLVGGS+G ++GG++SD++ K G R+WV+V S I PFA G L P+CFL L++ ++IGEMWIG+ +T ++ LVP+ +R + VA Y F I+ + G L VPP++ S + + P Sbjct: 10 SPSLLILCLAGSIRNAGGYVWAYNTQPYF-------------------------------EKY--------------------YPDVNLGYWMSWIPLVGGSMGVLLGGVISDQVIKNRGLYARVWVLVFSQLIGAPFAAGALFLHPPYCFLSLIVANIIGEMWIGVALTVVVELVPKALRTSIVAYYLFIISIIGGNMPLAVPPLKEATGSLRVALYLLYP 180
BLAST of mRNA_L-elsbetiae_contig15029.3612.1 vs. uniprot
Match: A0A3S0ZD38_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZD38_ELYCH) HSP 1 Score: 140 bits (354), Expect = 1.540e-32 Identity = 82/218 (37.61%), Postives = 117/218 (53.67%), Query Frame = 1 Query: 625 LSEAWLGSPSLLLICLAGGIRDAGGFVFSYYLASYFSPLMDGNAMLTSDGSCSSSYDASFNGTQICDESYPWCVDGSCNTLSSSPWHDIGMPASHLELFVSWVPLVGGSLGAMMGGILSDRIAKRHGTAGRLWVVVVSNAIATPFAVGVLVAPYPWCFLCLLMVSLIGEMWIGIMVTCIMTLVPRHVRVTSVALYNFFITNLSGLCTLLVPPIRARYD 1278 +S+A+L SPSLLL+CLAG IR+AGG+V++Y YF DA +G+ ++SW+PLVGGSLG + GG +SDRI KR G R++V+V S +A PFA G L PW F+ L+ ++IGEMW+G+ + + LVP VR ++VA+Y F I+N+ G LLVPPI+ ++ Sbjct: 273 ISKAFL-SPSLLLLCLAGSIRNAGGYVWAYNTQPYF--------------------DA------------------------------VGVSKETTGSYMSWIPLVGGSLGVLFGGFISDRIVKRRGLYARIFVLVASQFVAAPFAAGALFLDVPWSFISLIPANIIGEMWVGVTLAVGVELVPAQVRTSAVAVYLFIISNIGGNVPLLVPPIQHSFE 439
BLAST of mRNA_L-elsbetiae_contig15029.3612.1 vs. uniprot
Match: A0A8J1U014_OWEFU (Ofus.G082900 protein n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U014_OWEFU) HSP 1 Score: 140 bits (352), Expect = 2.800e-32 Identity = 73/211 (34.60%), Postives = 108/211 (51.18%), Query Frame = 1 Query: 649 PSLLLICLAGGIRDAGGFVFSYYLASYFSPLMDGNAMLTSDGSCSSSYDASFNGTQICDESYPWCVDGSCNTLSSSPWHDIGMPASHLELFVSWVPLVGGSLGAMMGGILSDRIAKRHGTAGRLWVVVVSNAIATPFAVGVLVAPYPWCFLCLLMVSLIGEMWIGIMVTCIMTLVPRHVRVTSVALYNFFITNLSGLCTLLVPPIRARYDS 1281 PSLLL+CLAG IR+AGG+V++Y YF I + F+SW+PL+GGSLGA++GG +SDR+ R G R+ V+V+S +A PFA G L PWC++ L+ +++GEMW+G+ + ++ LVP VR ++A Y F I+N+ G LLVPPI+ + + Sbjct: 278 PSLLLLCLAGSIRNAGGYVWAYNTQPYF--------------------------------------------------ESIHQTRDQIAKFMSWIPLIGGSLGAVLGGFISDRVVTRRGPTARIMVLVISQLVAAPFAAGALFLNPPWCYISLIPANIVGEMWVGVTLAVVIELVPWSVRTGAIAFYLFIISNIGGNVPLLVPPIQKAFQN 438
BLAST of mRNA_L-elsbetiae_contig15029.3612.1 vs. uniprot
Match: UPI001CFB9320 (uncharacterized protein LOC122790598 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFB9320) HSP 1 Score: 138 bits (347), Expect = 3.300e-32 Identity = 78/210 (37.14%), Postives = 109/210 (51.90%), Query Frame = 1 Query: 646 SPSLLLICLAGGIRDAGGFVFSYYLASYFSPLMDGNAMLTSDGSCSSSYDASFNGTQICDESYPWCVDGSCNTLSSSPWHDIGMPASHLELFVSWVPLVGGSLGAMMGGILSDRIAKRHGTAGRLWVVVVSNAIATPFAVGVLVAPYPWCFLCLLMVSLIGEMWIGIMVTCIMTLVPRHVRVTSVALYNFFITNLSGLCTLLVPPIRARY 1275 SPSLLL+CLAG IR+AGG+V++Y YF ++ P + + L++SW+P+VGGS G + GG +SDR+ KR G R+WV+V+S IA PF VG L P+ FL L+ +IGEMW+G+ + ++ LVP VR ++VA Y F ITN+ G LLVPP+ Y Sbjct: 124 SPSLLLLCLAGSIRNAGGYVWAYNAPLYF---------------------------------------------------NLYYPETDVGLWLSWIPMVGGSFGVLFGGFISDRVVKRKGIHARIWVLVLSQMIAAPFLVGALWFSPPYSFLILIPAYIIGEMWVGVTLAILVELVPPVVRTSAVAFYLFIITNIGGNVPLLVPPLTTLY 282
BLAST of mRNA_L-elsbetiae_contig15029.3612.1 vs. uniprot
Match: A0A7S4DD60_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD60_HETAK) HSP 1 Score: 135 bits (340), Expect = 5.940e-32 Identity = 59/147 (40.14%), Postives = 91/147 (61.90%), Query Frame = 1 Query: 850 GSCNTLSSSPWHDIGMPASHLELFVSWVPLVGGSLGAMMGGILSDRIAKRHGTAGRLWVVVVSNAIATPFAVGVLVAPYPWCFLCLLMVSLIGEMWIGIMVTCIMTLVPRHVRVTSVALYNFFITNLSGLCTLLVPPIRARYDSPHI 1290 G C L+ +PWH+ GMP + EL++SW P+V GS+G + GG +SD K+HG R+WV++V +ATPFA G LV YP+CF+ + LIGE W+G+ + I+ P ++R TSVA++ F TN+ G P + + + ++ Sbjct: 1 GGCARLADAPWHNRGMPVARFELYISWSPVVAGSIGVLFGGWVSDHYVKKHGQVARIWVIIVLTLLATPFAAGTLVLDYPFCFVSHFLCLLIGEGWMGVALAMILDCSPPNIRATSVAIFLFIATNIGGNLVSFFPLLTGFFSNGNV 147 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15029.3612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15029.3612.1 >prot_L-elsbetiae_contig15029.3612.1 ID=prot_L-elsbetiae_contig15029.3612.1|Name=mRNA_L-elsbetiae_contig15029.3612.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=547bp GVFYVGLFAGFSLSLGGGTLIDDLLGWRWAYRLAATAGFVAAVITYATVQback to top mRNA from alignment at L-elsbetiae_contig15029:29..3586- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15029.3612.1 ID=mRNA_L-elsbetiae_contig15029.3612.1|Name=mRNA_L-elsbetiae_contig15029.3612.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3558bp|location=Sequence derived from alignment at L-elsbetiae_contig15029:29..3586- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15029:29..3586- >mRNA_L-elsbetiae_contig15029.3612.1 ID=mRNA_L-elsbetiae_contig15029.3612.1|Name=mRNA_L-elsbetiae_contig15029.3612.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3282bp|location=Sequence derived from alignment at L-elsbetiae_contig15029:29..3586- (Laminarionema elsbetiae ELsaHSoW15)back to top |