mRNA_L-elsbetiae_contig14822.3489.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14822.3489.1
Unique NamemRNA_L-elsbetiae_contig14822.3489.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: D7G2M9_ECTSI (Indole-3-glycerol-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M9_ECTSI)

HSP 1 Score: 490 bits (1261), Expect = 5.570e-171
Identity = 247/278 (88.85%), Postives = 261/278 (93.88%), Query Frame = 3
Query:    3 QMRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTPPPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLVAGGGGGAASGPELIRGIMDRVGVPRSMLGWGVQAEDLDYEDRKR 836
            QMRLSYGASESCYALR ALRRN GQE D  AVV+ADMKRRSPTSAEL P+VNAFDDPAAWASQLHTAGA VLMVNTDGPAWGGSLSDLD VVAHFKKLGKTPPPIV KD+IVHP+QMAQALEKGAAGTVLIACVLGPALCDFMDAAT+MGTECIVEVHTPAEVEKALEHGASVIMVNNWDR+TGKLYPKQA AVR++IPD VLTIASGGI+S+EQAGRLTDEGYDAVVLGRSLV+G     ASGPELIRGI+DRVGVPRSMLGWGV+AEDLDY+ RKR
Sbjct:  115 QMRLSYGASESCYALRSALRRNKGQEQDHQAVVVADMKRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDKVVAHFKKLGKTPPPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRITGKLYPKQAKAVRHLIPDQVLTIASGGIDSVEQAGRLTDEGYDAVVLGRSLVSG-----ASGPELIRGIVDRVGVPRSMLGWGVKAEDLDYDRRKR 387          
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: A0A7S2BZD9_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZD9_9STRA)

HSP 1 Score: 216 bits (551), Expect = 3.300e-64
Identity = 129/279 (46.24%), Postives = 167/279 (59.86%), Query Frame = 3
Query:    3 QMRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTP---------PPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLVAGGGGGAASGPELIRGIMDRVGVPRSMLGWGVQAED 812
            ++RL Y A +S + +  ALR+     D++   V+AD+KR SPTS  L   V+ F+D      +L   G    MVNTD   WGGS+ DL +VV+  K + K P           +VMKD+I+ PIQ+A ALE GA G VL+A V+G AL + M+AAT MGTE IVEVHTP E   A++ GAS+IMVNNWDR TG  +P QA AVR  IPDH++TIA+GG+ S +QA RL D GYD V LGR+L             L+R I      P S+ GW    +D
Sbjct:   75 KLRLGYVAEQSSFRVTRALRKYK-LGDERPMTVLADLKRTSPTSRALPRTVSGFNDAGRRTEELMNFGVTATMVNTDELGWGGSMDDLSSVVSKVKAMEKLPGKTGEMANMTAVVMKDLIIDPIQIAVALESGAHGVVLLANVVGQALEELMEAATCMGTEAIVEVHTPNEARNAVDLGASIIMVNNWDRATGTWHPDQALAVRGQIPDHIVTIATGGLASSDQARRLADVGYDCVALGRALAV-----HPQPSRLVRNIRAHR-APPSIPGWNGPRDD 346          
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: A0A7S2RG86_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RG86_9STRA)

HSP 1 Score: 199 bits (507), Expect = 2.280e-57
Identity = 117/239 (48.95%), Postives = 151/239 (63.18%), Query Frame = 3
Query:    6 MRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTPPP-----IVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLVA 707
            +R  + +  S Y L  ALR +   +  +++V+  D+KR SPTS  L   V+ F D    A +    G  VL VNTD   WGG L DL++VV   K   K   P     +VMKD+I+HPIQ+A+ALE+GA G +L A +LG  L   +DAAT+MGTE IVEVHTP E + ALE GA ++MVNNWDR  GK +  QA  VR +IPD+V+TIA+GGI S E+A RL   GYD V LGR+L A
Sbjct:  101 LRQGFISDTSSYTLTRALRLSRLGDTRKISVM-GDLKRLSPTSKNLPRTVSGFVDAGRRARECLELGVNVLSVNTDQAGWGGKLDDLNSVVQARKDYAKNIDPSNHTAVVMKDLIIHPIQIAEALERGANGVILQAGLLGAQLGPLLDAATIMGTEAIVEVHTPNECDYALELGAMILMVNNWDRTDGKWHRNQAECVREVIPDNVVTIAAGGISSSEEATRLAAIGYDCVCLGRALAA 338          
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: W7TXI0_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXI0_9STRA)

HSP 1 Score: 193 bits (490), Expect = 7.370e-55
Identity = 111/266 (41.73%), Postives = 160/266 (60.15%), Query Frame = 3
Query:   39 YALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKL-GKTPPPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLVAGGGGGAASGPELIRGIMDRVGVPRSMLGWGVQAEDLDYEDRK 833
            Y +  AL+R+TG++   ++V IA++KRR+PT      E+ A  D    A QL   GA VLMV TD   +GGS+ DL +    F  +  +  PPIV KD+ +HP+Q++QA+E GA G +L+A ++G +L   +DA T +G E +VEVHT AE+EKALE GA+ I+  NWDR+   LY  QA  ++ MIPD ++ I +G + +++ A  L D GYDAV+LGR L       +A     I  I  R  +P  + G G+ AEDL    R+
Sbjct:  109 YRVARALKRSTGEQVHVMSV-IAEIKRRTPTGDTTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLAT-----SADITRFISSIRSRESMPSLLTGAGMMAEDLRRGRRE 368          
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: A0A0G4F0L6_VITBC (Indole-3-glycerol-phosphate synthase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F0L6_VITBC)

HSP 1 Score: 165 bits (418), Expect = 1.270e-44
Identity = 111/282 (39.36%), Postives = 153/282 (54.26%), Query Frame = 3
Query:    6 MRLSYGASESCYALRGALR--RNTGQEDDQLAVVIADMKRRSPTSAELSPE-VNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLG---KTPPPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLVAGGGGGAASGPELIRGIMDRVGVPRSML--GWGVQAEDLDYED 827
            MRL Y  S     +  +LR  RN      +L + IAD+KR SPT  + S   V ++ D +  A  L   G   + VNTD   WGGS  D+  +   F+  G      P I+ KD+++HP+QMA A+E GA G VL + +LG  +   M+AA VMG E +VEVHT  E + A++ GA++IMVN WDRV G+L P QAG +R+ I   V+TI +GGI+  +Q   +   GYD+VVLGR L           P+L+  +    G PR  L  G G    D   +D
Sbjct:   56 MRLQYVRSPVNIKISESLRPPRNDSDFCHKLTM-IADLKRESPTHPDPSQRRVLSYSDASEMACALTNMGFDAIFVNTDQSFWGGSYDDIRKIKEEFRVRGVRFSERPAIIAKDLMLHPLQMAYAVEMGADGVVLNSLLLGQDMEHMMEAAIVMGCETVVEVHTQQEADDAVKQGANIIMVNQWDRVDGRLSPLQAGKLRDRIHPEVITIVAGGIQDYKQISDIGMLGYDSVVLGRKLAD------EDVPQLVDRVRAWEGPPRLTLTMGMGRAIRDEVQQD 330          
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: A0A7S1TYS9_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYS9_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.460e-44
Identity = 110/284 (38.73%), Postives = 154/284 (54.23%), Query Frame = 3
Query:    3 QMRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTP-PPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHV--LTIASGGI------ESLEQAGRLTDEGYDAVVLGRSLVAGGGGGAASGPELIRGIMDRVGVPRSMLGWGVQAEDLDYED 827
            ++R+ Y +          +RR   Q D+    V  D+KR SPT    + +V  F D    A+ L  AG   ++VNTD  ++GG ++DL A VA  K L +   P IVMKD+I+ PIQ+A A E GA    L+ACV GP L D MDAATVMG E IVEVHTP E + A+  GA++  + NWDR  GKL P  A  +RN +PD V  + +A+GG+      +  ++A  + + G+D VV GR +             L++ I  R G+PR MLG        + E+
Sbjct:   82 RLRMGYMSQNFTLQATSRIRR---QGDELRLSVCYDLKRFSPTGVRPA-QVVGFADAGQMAATLADAGVDAILVNTDFNSYGGDVADLKAAVAATKDLPEERRPAIVMKDIIIDPIQVAVAAEAGADAVYLMACVAGPVLEDLMDAATVMGIEAIVEVHTPNEAKYAMSCGATLFALTNWDRPEGKLIPLHAAKLRNFLPDGVGCVALATGGLFMGDAADPADEAMAIGEMGFDGVVAGRGMAQ-----WKDVTGLVKAIRAREGLPRVMLGMSPPVPPEEGEE 356          
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: A0A7S0SWD0_9STRA (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWD0_9STRA)

HSP 1 Score: 161 bits (408), Expect = 4.340e-44
Identity = 86/215 (40.00%), Postives = 136/215 (63.26%), Query Frame = 3
Query:    6 MRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTPPPI-VMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQ 647
            MR+SY ASE+ + +  +L+R+    +     ++ D+KR+SPT    +  +  F   + ++  L  AG    ++NTD   +GG LSD+       K +    PP+ + KD+I+HP+Q+AQAL+ GA+G ++I  V+G  L   +DA T+MGTE +VEVHTP E+E AL  GA++ +VN WDR+TGKLYP QA  + +M+P + + IA+G I +++Q
Sbjct:   34 MRMSYMASENKFNVTNSLKRDATINNQHTISILIDLKRKSPTIPN-NRNIIDFSSTSKFSELLTVAGVDGFLINTDELEYGGRLSDIKESSKAVKAIRPNKPPVCICKDIIIHPVQIAQALQAGASGILIIMAVVGSDLEVLLDACTIMGTEAVVEVHTPNELEYALSKGATIFLVNMWDRLTGKLYPDQAKGLVSMMPMNSIAIAAGNINNIDQ 247          
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: Q4N5M1_THEPA (Indole-3-glycerol-phosphate synthase n=1 Tax=Theileria parva TaxID=5875 RepID=Q4N5M1_THEPA)

HSP 1 Score: 167 bits (422), Expect = 5.900e-44
Identity = 96/218 (44.04%), Postives = 136/218 (62.39%), Query Frame = 3
Query:   57 LRRNTGQEDDQLAVVIADMKRRSPT-SAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTP-PPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLV 704
            LRRN+     +L V IADMKRR+PT + +    V ++ D    A  + + G  V+ VN D   +GG ++DL+ V  + +KLG+T  P IVMKD+I+HPIQ+AQA+E  A G +L A +LG AL D + A   MG E IVEVHT A+  ++ + G +  M+N WDR+  KLYP +A  ++  +PD+ +TIA+GGI ++EQ   L   G D V  GR LV
Sbjct:    2 LRRNSNNTHHKLCV-IADMKRRTPTHNPKCDNNVLSYTDAGEVAMNMASVGFDVIFVNVDQINYGGHINDLNKVFLNLRKLGRTKRPAIVMKDIILHPIQIAQAVEMRADGVILNAAILGNALQDLLTACVTMGIEAIVEVHTTADALRSADIGFNHFMINQWDRIKNKLYPTRALEIKEALPDNAITIAAGGIMTMEQVHMLALAGIDGVCFGRRLV 218          
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: J4DP27_THEOR (Indole-3-glycerol-phosphate synthase n=2 Tax=Theileria orientalis TaxID=68886 RepID=J4DP27_THEOR)

HSP 1 Score: 168 bits (425), Expect = 1.360e-43
Identity = 99/236 (41.95%), Postives = 143/236 (60.59%), Query Frame = 3
Query:    3 QMRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPT-SAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTP-PPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLV 704
            Q+RL++    S   L   LRRN+ Q+  +L+V IADMKRR+PT +      V ++ +       + + G  ++ VNTD   +GG ++DL       +KLG+   P IVMKD+I+HPIQ+AQA E  A G +L A +LG  L D +     MG E I EVHT AE  K+++ G + IMVN WDR+   LYP +A  V+  +P++V  IA+GGI +++Q  +L   GYDA+VLGR L+
Sbjct:  106 QLRLNFLQCTSNLKLSDMLRRNSNQKHHKLSV-IADMKRRTPTHNPTCDNNVLSYSNAGEVGLSMASVGFDIIFVNTDEVNYGGHINDLYKTFLELRKLGRRERPAIVMKDIILHPIQIAQAAELRADGVILNAAILGKVLGDLLGTCVTMGIEAIAEVHTVAEALKSIDMGFTHIMVNQWDRIKNVLYPTRALEVKEALPENVTAIAAGGIMTMDQVHQLALAGYDAIVLGRRLI 340          
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: Q4UDX1_THEAN (Indole-3-glycerol-phosphate synthase n=2 Tax=Theileria annulata TaxID=5874 RepID=Q4UDX1_THEAN)

HSP 1 Score: 167 bits (423), Expect = 3.700e-43
Identity = 100/236 (42.37%), Postives = 142/236 (60.17%), Query Frame = 3
Query:    3 QMRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPT-SAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTP-PPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLV 704
            Q+RL+Y    S   L   L RN+     +L V IADMKRR+PT +      V ++ D    A  + + G  V+ VN D   +GG ++DL+ V  + +KLG+T  P IVMKD+I+HPIQ+AQA+E  A G +L A +LG AL D + +   MG E IVEVHT A+  ++ E G +  M+N WDR+   LYP +A  ++ ++P++  TIA+GGI ++EQ   L   G DAV  GR LV
Sbjct:  126 QLRLNYLQCTSNLKLSDMLSRNSNNTHHKLCV-IADMKRRTPTHNPRCDNNVLSYTDAGEVALNMASVGFDVIFVNVDQKNYGGHINDLNKVFLNLRKLGRTQRPAIVMKDIILHPIQIAQAVEMRADGVILNAAILGNALKDLLTSCITMGIEAIVEVHTTADALRSAEIGFTNFMINQWDRIKNILYPTRALEIKEVLPEYATTIAAGGIMTMEQVHMLALAGIDAVCFGRRLV 360          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2M9_ECTSI5.570e-17188.85Indole-3-glycerol-phosphate synthase n=1 Tax=Ectoc... [more]
A0A7S2BZD9_9STRA3.300e-6446.24Indole-3-glycerol-phosphate synthase n=1 Tax=Dicty... [more]
A0A7S2RG86_9STRA2.280e-5748.95Indole-3-glycerol-phosphate synthase n=1 Tax=Rhizo... [more]
W7TXI0_9STRA7.370e-5541.73Indole-3-glycerol-phosphate synthase n=1 Tax=Nanno... [more]
A0A0G4F0L6_VITBC1.270e-4439.36Indole-3-glycerol-phosphate synthase n=1 Tax=Vitre... [more]
A0A7S1TYS9_9STRA3.460e-4438.73Indole-3-glycerol-phosphate synthase n=1 Tax=Phaeo... [more]
A0A7S0SWD0_9STRA4.340e-4440.00Indole-3-glycerol-phosphate synthase (Fragment) n=... [more]
Q4N5M1_THEPA5.900e-4444.04Indole-3-glycerol-phosphate synthase n=1 Tax=Theil... [more]
J4DP27_THEOR1.360e-4341.95Indole-3-glycerol-phosphate synthase n=2 Tax=Theil... [more]
Q4UDX1_THEAN3.700e-4342.37Indole-3-glycerol-phosphate synthase n=2 Tax=Theil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14822contigL-elsbetiae_contig14822:518..3764 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeApicomplexa
Seed ortholog score168.3
Seed ortholog evalue5e-39
Seed eggNOG ortholog5875.XP_764835.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Indole-3-glycerol phosphate synthase
EggNOG OGs3KAMT@422676,3YBM4@5794,3Z43K@5863,COG0134@1,KOG4201@2759
COG Functional cat.E
Best tax levelPiroplasmida
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionIndole-3-glycerol-phosphate synthase (C-terminal region) Indole-3-glycerol-phosphate synthase (N-term)
Ec32 orthologEc-11_002820.1
Exons6
Model size1072
Cds size834
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14822.3489.1prot_L-elsbetiae_contig14822.3489.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14822 751..3759 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815598.1246648-UTR-L-elsbetiae_contig14822:517..7501622815598.1246648-UTR-L-elsbetiae_contig14822:517..750Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14822 518..750 -
1691682982.3257024-UTR-L-elsbetiae_contig14822:517..7501691682982.3257024-UTR-L-elsbetiae_contig14822:517..750Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14822 518..750 -
1622815598.2024438-UTR-L-elsbetiae_contig14822:3759..37641622815598.2024438-UTR-L-elsbetiae_contig14822:3759..3764Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14822 3760..3764 -
1691682982.4044852-UTR-L-elsbetiae_contig14822:3759..37641691682982.4044852-UTR-L-elsbetiae_contig14822:3759..3764Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14822 3760..3764 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815598.1367512-CDS-L-elsbetiae_contig14822:750..9841622815598.1367512-CDS-L-elsbetiae_contig14822:750..984Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14822 751..984 -
1691682982.342629-CDS-L-elsbetiae_contig14822:750..9841691682982.342629-CDS-L-elsbetiae_contig14822:750..984Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14822 751..984 -
1622815598.1468039-CDS-L-elsbetiae_contig14822:1415..15351622815598.1468039-CDS-L-elsbetiae_contig14822:1415..1535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14822 1416..1535 -
1691682982.3520656-CDS-L-elsbetiae_contig14822:1415..15351691682982.3520656-CDS-L-elsbetiae_contig14822:1415..1535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14822 1416..1535 -
1622815598.156723-CDS-L-elsbetiae_contig14822:2076..21571622815598.156723-CDS-L-elsbetiae_contig14822:2076..2157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14822 2077..2157 -
1691682982.3610082-CDS-L-elsbetiae_contig14822:2076..21571691682982.3610082-CDS-L-elsbetiae_contig14822:2076..2157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14822 2077..2157 -
1622815598.1673539-CDS-L-elsbetiae_contig14822:2456..25821622815598.1673539-CDS-L-elsbetiae_contig14822:2456..2582Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14822 2457..2582 -
1691682982.374309-CDS-L-elsbetiae_contig14822:2456..25821691682982.374309-CDS-L-elsbetiae_contig14822:2456..2582Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14822 2457..2582 -
1622815598.1794324-CDS-L-elsbetiae_contig14822:3107..31941622815598.1794324-CDS-L-elsbetiae_contig14822:3107..3194Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14822 3108..3194 -
1691682982.3835406-CDS-L-elsbetiae_contig14822:3107..31941691682982.3835406-CDS-L-elsbetiae_contig14822:3107..3194Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14822 3108..3194 -
1622815598.191909-CDS-L-elsbetiae_contig14822:3573..37591622815598.191909-CDS-L-elsbetiae_contig14822:3573..3759Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14822 3574..3759 -
1691682982.3919423-CDS-L-elsbetiae_contig14822:3573..37591691682982.3919423-CDS-L-elsbetiae_contig14822:3573..3759Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14822 3574..3759 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14822.3489.1

>prot_L-elsbetiae_contig14822.3489.1 ID=prot_L-elsbetiae_contig14822.3489.1|Name=mRNA_L-elsbetiae_contig14822.3489.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=278bp
MRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEV
NAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKT
PPPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGT
ECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDH
VLTIASGGIESLEQAGRLTDEGYDAVVLGRSLVAGGGGGAASGPELIRGI
MDRVGVPRSMLGWGVQAEDLDYEDRKR*
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mRNA from alignment at L-elsbetiae_contig14822:518..3764-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14822.3489.1 ID=mRNA_L-elsbetiae_contig14822.3489.1|Name=mRNA_L-elsbetiae_contig14822.3489.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3247bp|location=Sequence derived from alignment at L-elsbetiae_contig14822:518..3764- (Laminarionema elsbetiae ELsaHSoW15)
TGCAGATGAGGCTGTCCTACGGTGCCAGTGAGAGTTGTTACGCCCTGCGT GGCGCTCTCCGGAGGAACACGGGGCAGGAGGACGACCAGCTGGCGGTGGT CATCGCCGACATGAAGCGCCGCTCACCGACGTCGGCCGAACTATCGCCCG AAGTGAACGCCTTCGACGATCCGGCGGCCTGGGCGTCTCAGGTAATGTCG ACACAAGTCGCAGCACAGAGAGAGTTGTGCAAATCCTGATCCGGATCGAA CTGTTCCGGGTGTCCGGGTGGTGCACATCAGTATTGTCCGCGCCTGAACT TACTCTTACTGTTCGTTTCTGTTTTGATGCGGCGGAAACCCACCGTTCCC TTTTGTGGCTTTGATTCGATCACGAAGCGCTGCCATGACGGAACGACCTT CCCCTTTTGGTGCCCAGCAGCTCAACCGCCCCCATCATCTACTTCTCTCC CATATTCGCCGCATGTTTGGACGTGCTTCGTTGCCGATGTGCCACCAATG GGTCTATCGGACGAACACACTGGAACTCGGCGCTGACATGGGCTGACCAT GGCCGACCAACCGCATTCAGCTTCACACGGCTGGCGCCAAGGTGCTGATG GTCAACACGGACGGCCCGGCGTGGGGCGGAAGCCTCTCCGACCTCGACGC TGTCGTGGTGAGTGTTGACGTACCCGCGTGCGTACGTTTGAAGGTTTGCG AAAATCCATCGTAACCGATGGCGTTGTGGTGACAGAGTGCCAGAGGTGGA GTGATATCCTACTCTTCCCAGACGCGACGGAAGGAGTAACAGCAGAATAT TGTCTTGTTGAGCCTGCCAGGTAACACTTCACTGTACCTGTGCCCAGGAT AGACACAGCACACTGGCATGGTAGAAAATAAAAAACACATACATACATAC CACTGCGGTTTCTACGTACGCAGCGACCAAAAATGATGCGCTGCCTCTAA ATTTGCTCGAACCCTTGTCCGAGCGCTGGTAGTCGTGTGGGTATCCGTAA GAAAAAACAGAAAAAAGTGGGATCGCCCTCGATTGACCCTCAGTCGGAAA GTATAACCAAAGCCTAGTAAAACTACTTACAGAGCGTTGTCAGCGACCCA GACATTTTACCTGACACCCCCCTCCCCGCGTTGGCCCTCTGGCTCGGTGC CTCTTCCCTCGCTCTCTCTTCTCACGATGAAGGCACACTTTAAAAAGCTG GGAAAGACCCCACCACCGATCGTGATGAAGGATATGATCGTACATCCGAT TCAGATGGCGCAAGCTCTGGAGAAAGGGGCCGCGGGCACAGTGCTCATCG CTTGTGTGGTGAGAGGGAGAGATAGAGAGCAGAAGAAGAGATAAAAATAA CTGCTGAAACAAAACAAAATGACACATGCAAGACAAGGTCAGAGGGGATA AGTCATATGCAGAATGTGCAGGCATTTGCTTCGAAGCAGATACAGCGGCT TGAACACAGTCATGGCGCGCGAGGAGACGAGCTGATATGTAGATATGAGA GGTATGTGTCGAAGGCCGAGAGAAAAATGACCTTCGGCTTCGGCACCCTA CCCCCTGGACGGGTGTGATAAGTCCACAACTGTTCGTCGTTTTCGTTCGA AACGCAGCTCGGGCCGGCCCTCTGCGACTTTATGGACGCGGCGACGGTGA TGGGAACAGAGTGCATCGTAGAAGTGCACACCCCTGCGGTGAGTTTCTTG TGTCGGAAGTGGAAAACCTGTGAACTAGTCTCCGCAACACGAAAGCAGTA CAGACAAATATAATGTGCGACAATATGGGGTCTCTCATGCTGTCTATGTA TGCAGATTCGATTTTCTCCGCGCAGAGTGCGCGGTCACTGAAATTTATAT ACCAATGTACGTATTAAGACACATGTCTAAATAGTTGGTAATGAATATGC AGTATTTTTTTGTGTCAATTCGTGTTTTCCACACGTAAAGGTTCGCGTTC GCATTCAGCCGGACGAATGCGTTTTGTTTCAACCGATTTTTCGTAAGAGG GAGCCCTGAAATAAACTTCGTACCTTTCGAATGGTATTAATGCTGCTTAT TTTGCCGAAAAGGCCCTTCAGCTACATTCCTGACCCCAAACCCCTCGATC CTCGCTCCAATTCATCGATCCCAAAAGCGTCACCGCTCAAGGTTTGGTCG TCCTGCGCATGTGCCTGAGTCGCTTTGTAGGTGTGTCCCACGTCCTTTCT GATTCGTGACGTTCGTATTAATTTCATAGGAGGTCGAAAAAGCTCTGGAG CACGGCGCGAGCGTGATCATGGTGAACAACTGGGACCGCGTTACGGGAAA GCTGTACCCCAAGCAGGCCGGGGCTGTGCGCAACATGATACCAGACCACG TACGCGAGCAACGACCAAACAGTTGTCCCATGTTGAGATCGAATAGGGTG CACACATTAGTCGGCAACGGAAGGGGGGTTTAGCATTGCGGAGCACAACG AGATAGACAGGCAGGCAAGCAAGCGTACTCGACCCATTCGCGATATATAC AGAGGTAAGCATGACGTGACACCGCATGCGAGATGTGATGTTGTTCATGG CGGTACGTGCATCTATGCAACTTCTGTCCCGTACACAGTGTGACCCCGGT TGGATCGTCTAGCTAGTCGTAGTGGAGTATGCGGGCCAGTGGGACAGACG ACGAATATGCCAATAATGGGAGGAAAAAACAAAAAAATATATACATACGA AGTATATGTATACGAAGAAAAACGAGCGCACATGCTCGATCCTTCACACT CTCTCCGCTCTTCTGCTTCTTGTTCTTCAGGTTTTGACGATCGCTTCGGG TGGTATCGAAAGCCTGGAGCAGGCTGGAAGGCTCACGGATGAGGGGTACG ACGCGGTTGTCCTGGGCAGGAGCTTAGTCGCGGGCGGCGGAGGCGGGGCA GCTTCAGGACCGGAGCTGATCCGCGGCATCATGGACAGGGTCGGCGTGCC GCGGAGCATGCTCGGCTGGGGGGTGCAGGCAGAGGATTTGGATTACGAGG ACCGAAAAAGATGACGATTGTGATTGCGTTGGCGGTAGTGGTGATAAGTG TTGTTGGTCGGGACCGATAGCAATGATGCTGAGGTACATGCATATGTTGA AGGGCGACGAATGGCCGGCCCGAGCGGGCTTCGACTGGCAAGGCCGAGAA AACGAGAAGAGGAGAGAAATTAATTTACCAAATTGTAGGTTCTTTATTAT TTTCATGCAGCGCCGCGTGTATAACATACGTGTATTACCAGGTTGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14822:518..3764-

>mRNA_L-elsbetiae_contig14822.3489.1 ID=mRNA_L-elsbetiae_contig14822.3489.1|Name=mRNA_L-elsbetiae_contig14822.3489.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1668bp|location=Sequence derived from alignment at L-elsbetiae_contig14822:518..3764- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGGCTGTCCTACGGTGCCAGTGAGAGTTGTTACGCCCTGCGTGGCGC
TCTCCGGAGGAACACGGGGCAGGAGGACGACCAGCTGGCGGTGGTCATCG
CCGACATGAAGCGCCGCTCACCGACGTCGGCCGAACTATCGCCCGAAGTG
AACGCCTTCGACGATCCGGCGGCCTGGGCGTCTCAGATGAGGCTGTCCTA
CGGTGCCAGTGAGAGTTGTTACGCCCTGCGTGGCGCTCTCCGGAGGAACA
CGGGGCAGGAGGACGACCAGCTGGCGGTGGTCATCGCCGACATGAAGCGC
CGCTCACCGACGTCGGCCGAACTATCGCCCGAAGTGAACGCCTTCGACGA
TCCGGCGGCCTGGGCGTCTCAGCTTCACACGGCTGGCGCCAAGGTGCTGA
TGGTCAACACGGACGGCCCGGCGTGGGGCGGAAGCCTCTCCGACCTCGAC
GCTGTCGTGCTTCACACGGCTGGCGCCAAGGTGCTGATGGTCAACACGGA
CGGCCCGGCGTGGGGCGGAAGCCTCTCCGACCTCGACGCTGTCGTGGCAC
ACTTTAAAAAGCTGGGAAAGACCCCACCACCGATCGTGATGAAGGATATG
ATCGTACATCCGATTCAGATGGCGCAAGCTCTGGAGAAAGGGGCCGCGGG
CACAGTGCTCATCGCTTGTGTGGCACACTTTAAAAAGCTGGGAAAGACCC
CACCACCGATCGTGATGAAGGATATGATCGTACATCCGATTCAGATGGCG
CAAGCTCTGGAGAAAGGGGCCGCGGGCACAGTGCTCATCGCTTGTGTGCT
CGGGCCGGCCCTCTGCGACTTTATGGACGCGGCGACGGTGATGGGAACAG
AGTGCATCGTAGAAGTGCACACCCCTGCGCTCGGGCCGGCCCTCTGCGAC
TTTATGGACGCGGCGACGGTGATGGGAACAGAGTGCATCGTAGAAGTGCA
CACCCCTGCGGAGGTCGAAAAAGCTCTGGAGCACGGCGCGAGCGTGATCA
TGGTGAACAACTGGGACCGCGTTACGGGAAAGCTGTACCCCAAGCAGGCC
GGGGCTGTGCGCAACATGATACCAGACCACGAGGTCGAAAAAGCTCTGGA
GCACGGCGCGAGCGTGATCATGGTGAACAACTGGGACCGCGTTACGGGAA
AGCTGTACCCCAAGCAGGCCGGGGCTGTGCGCAACATGATACCAGACCAC
GTTTTGACGATCGCTTCGGGTGGTATCGAAAGCCTGGAGCAGGCTGGAAG
GCTCACGGATGAGGGGTACGACGCGGTTGTCCTGGGCAGGAGCTTAGTCG
CGGGCGGCGGAGGCGGGGCAGCTTCAGGACCGGAGCTGATCCGCGGCATC
ATGGACAGGGTCGGCGTGCCGCGGAGCATGCTCGGCTGGGGGGTGCAGGC
AGAGGATTTGGATTACGAGGACCGAAAAAGATGAGTTTTGACGATCGCTT
CGGGTGGTATCGAAAGCCTGGAGCAGGCTGGAAGGCTCACGGATGAGGGG
TACGACGCGGTTGTCCTGGGCAGGAGCTTAGTCGCGGGCGGCGGAGGCGG
GGCAGCTTCAGGACCGGAGCTGATCCGCGGCATCATGGACAGGGTCGGCG
TGCCGCGGAGCATGCTCGGCTGGGGGGTGCAGGCAGAGGATTTGGATTAC
GAGGACCGAAAAAGATGA
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