mRNA_L-elsbetiae_contig14822.3489.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: D7G2M9_ECTSI (Indole-3-glycerol-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M9_ECTSI) HSP 1 Score: 490 bits (1261), Expect = 5.570e-171 Identity = 247/278 (88.85%), Postives = 261/278 (93.88%), Query Frame = 3 Query: 3 QMRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTPPPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLVAGGGGGAASGPELIRGIMDRVGVPRSMLGWGVQAEDLDYEDRKR 836 QMRLSYGASESCYALR ALRRN GQE D AVV+ADMKRRSPTSAEL P+VNAFDDPAAWASQLHTAGA VLMVNTDGPAWGGSLSDLD VVAHFKKLGKTPPPIV KD+IVHP+QMAQALEKGAAGTVLIACVLGPALCDFMDAAT+MGTECIVEVHTPAEVEKALEHGASVIMVNNWDR+TGKLYPKQA AVR++IPD VLTIASGGI+S+EQAGRLTDEGYDAVVLGRSLV+G ASGPELIRGI+DRVGVPRSMLGWGV+AEDLDY+ RKR Sbjct: 115 QMRLSYGASESCYALRSALRRNKGQEQDHQAVVVADMKRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDKVVAHFKKLGKTPPPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRITGKLYPKQAKAVRHLIPDQVLTIASGGIDSVEQAGRLTDEGYDAVVLGRSLVSG-----ASGPELIRGIVDRVGVPRSMLGWGVKAEDLDYDRRKR 387
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: A0A7S2BZD9_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZD9_9STRA) HSP 1 Score: 216 bits (551), Expect = 3.300e-64 Identity = 129/279 (46.24%), Postives = 167/279 (59.86%), Query Frame = 3 Query: 3 QMRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTP---------PPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLVAGGGGGAASGPELIRGIMDRVGVPRSMLGWGVQAED 812 ++RL Y A +S + + ALR+ D++ V+AD+KR SPTS L V+ F+D +L G MVNTD WGGS+ DL +VV+ K + K P +VMKD+I+ PIQ+A ALE GA G VL+A V+G AL + M+AAT MGTE IVEVHTP E A++ GAS+IMVNNWDR TG +P QA AVR IPDH++TIA+GG+ S +QA RL D GYD V LGR+L L+R I P S+ GW +D Sbjct: 75 KLRLGYVAEQSSFRVTRALRKYK-LGDERPMTVLADLKRTSPTSRALPRTVSGFNDAGRRTEELMNFGVTATMVNTDELGWGGSMDDLSSVVSKVKAMEKLPGKTGEMANMTAVVMKDLIIDPIQIAVALESGAHGVVLLANVVGQALEELMEAATCMGTEAIVEVHTPNEARNAVDLGASIIMVNNWDRATGTWHPDQALAVRGQIPDHIVTIATGGLASSDQARRLADVGYDCVALGRALAV-----HPQPSRLVRNIRAHR-APPSIPGWNGPRDD 346
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: A0A7S2RG86_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RG86_9STRA) HSP 1 Score: 199 bits (507), Expect = 2.280e-57 Identity = 117/239 (48.95%), Postives = 151/239 (63.18%), Query Frame = 3 Query: 6 MRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTPPP-----IVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLVA 707 +R + + S Y L ALR + + +++V+ D+KR SPTS L V+ F D A + G VL VNTD WGG L DL++VV K K P +VMKD+I+HPIQ+A+ALE+GA G +L A +LG L +DAAT+MGTE IVEVHTP E + ALE GA ++MVNNWDR GK + QA VR +IPD+V+TIA+GGI S E+A RL GYD V LGR+L A Sbjct: 101 LRQGFISDTSSYTLTRALRLSRLGDTRKISVM-GDLKRLSPTSKNLPRTVSGFVDAGRRARECLELGVNVLSVNTDQAGWGGKLDDLNSVVQARKDYAKNIDPSNHTAVVMKDLIIHPIQIAEALERGANGVILQAGLLGAQLGPLLDAATIMGTEAIVEVHTPNECDYALELGAMILMVNNWDRTDGKWHRNQAECVREVIPDNVVTIAAGGISSSEEATRLAAIGYDCVCLGRALAA 338
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: W7TXI0_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXI0_9STRA) HSP 1 Score: 193 bits (490), Expect = 7.370e-55 Identity = 111/266 (41.73%), Postives = 160/266 (60.15%), Query Frame = 3 Query: 39 YALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKL-GKTPPPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLVAGGGGGAASGPELIRGIMDRVGVPRSMLGWGVQAEDLDYEDRK 833 Y + AL+R+TG++ ++V IA++KRR+PT E+ A D A QL GA VLMV TD +GGS+ DL + F + + PPIV KD+ +HP+Q++QA+E GA G +L+A ++G +L +DA T +G E +VEVHT AE+EKALE GA+ I+ NWDR+ LY QA ++ MIPD ++ I +G + +++ A L D GYDAV+LGR L +A I I R +P + G G+ AEDL R+ Sbjct: 109 YRVARALKRSTGEQVHVMSV-IAEIKRRTPTGDTTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLAT-----SADITRFISSIRSRESMPSLLTGAGMMAEDLRRGRRE 368
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: A0A0G4F0L6_VITBC (Indole-3-glycerol-phosphate synthase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F0L6_VITBC) HSP 1 Score: 165 bits (418), Expect = 1.270e-44 Identity = 111/282 (39.36%), Postives = 153/282 (54.26%), Query Frame = 3 Query: 6 MRLSYGASESCYALRGALR--RNTGQEDDQLAVVIADMKRRSPTSAELSPE-VNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLG---KTPPPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLVAGGGGGAASGPELIRGIMDRVGVPRSML--GWGVQAEDLDYED 827 MRL Y S + +LR RN +L + IAD+KR SPT + S V ++ D + A L G + VNTD WGGS D+ + F+ G P I+ KD+++HP+QMA A+E GA G VL + +LG + M+AA VMG E +VEVHT E + A++ GA++IMVN WDRV G+L P QAG +R+ I V+TI +GGI+ +Q + GYD+VVLGR L P+L+ + G PR L G G D +D Sbjct: 56 MRLQYVRSPVNIKISESLRPPRNDSDFCHKLTM-IADLKRESPTHPDPSQRRVLSYSDASEMACALTNMGFDAIFVNTDQSFWGGSYDDIRKIKEEFRVRGVRFSERPAIIAKDLMLHPLQMAYAVEMGADGVVLNSLLLGQDMEHMMEAAIVMGCETVVEVHTQQEADDAVKQGANIIMVNQWDRVDGRLSPLQAGKLRDRIHPEVITIVAGGIQDYKQISDIGMLGYDSVVLGRKLAD------EDVPQLVDRVRAWEGPPRLTLTMGMGRAIRDEVQQD 330
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: A0A7S1TYS9_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYS9_9STRA) HSP 1 Score: 165 bits (418), Expect = 3.460e-44 Identity = 110/284 (38.73%), Postives = 154/284 (54.23%), Query Frame = 3 Query: 3 QMRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTP-PPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHV--LTIASGGI------ESLEQAGRLTDEGYDAVVLGRSLVAGGGGGAASGPELIRGIMDRVGVPRSMLGWGVQAEDLDYED 827 ++R+ Y + +RR Q D+ V D+KR SPT + +V F D A+ L AG ++VNTD ++GG ++DL A VA K L + P IVMKD+I+ PIQ+A A E GA L+ACV GP L D MDAATVMG E IVEVHTP E + A+ GA++ + NWDR GKL P A +RN +PD V + +A+GG+ + ++A + + G+D VV GR + L++ I R G+PR MLG + E+ Sbjct: 82 RLRMGYMSQNFTLQATSRIRR---QGDELRLSVCYDLKRFSPTGVRPA-QVVGFADAGQMAATLADAGVDAILVNTDFNSYGGDVADLKAAVAATKDLPEERRPAIVMKDIIIDPIQVAVAAEAGADAVYLMACVAGPVLEDLMDAATVMGIEAIVEVHTPNEAKYAMSCGATLFALTNWDRPEGKLIPLHAAKLRNFLPDGVGCVALATGGLFMGDAADPADEAMAIGEMGFDGVVAGRGMAQ-----WKDVTGLVKAIRAREGLPRVMLGMSPPVPPEEGEE 356
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: A0A7S0SWD0_9STRA (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWD0_9STRA) HSP 1 Score: 161 bits (408), Expect = 4.340e-44 Identity = 86/215 (40.00%), Postives = 136/215 (63.26%), Query Frame = 3 Query: 6 MRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTPPPI-VMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQ 647 MR+SY ASE+ + + +L+R+ + ++ D+KR+SPT + + F + ++ L AG ++NTD +GG LSD+ K + PP+ + KD+I+HP+Q+AQAL+ GA+G ++I V+G L +DA T+MGTE +VEVHTP E+E AL GA++ +VN WDR+TGKLYP QA + +M+P + + IA+G I +++Q Sbjct: 34 MRMSYMASENKFNVTNSLKRDATINNQHTISILIDLKRKSPTIPN-NRNIIDFSSTSKFSELLTVAGVDGFLINTDELEYGGRLSDIKESSKAVKAIRPNKPPVCICKDIIIHPVQIAQALQAGASGILIIMAVVGSDLEVLLDACTIMGTEAVVEVHTPNELEYALSKGATIFLVNMWDRLTGKLYPDQAKGLVSMMPMNSIAIAAGNINNIDQ 247
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: Q4N5M1_THEPA (Indole-3-glycerol-phosphate synthase n=1 Tax=Theileria parva TaxID=5875 RepID=Q4N5M1_THEPA) HSP 1 Score: 167 bits (422), Expect = 5.900e-44 Identity = 96/218 (44.04%), Postives = 136/218 (62.39%), Query Frame = 3 Query: 57 LRRNTGQEDDQLAVVIADMKRRSPT-SAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTP-PPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLV 704 LRRN+ +L V IADMKRR+PT + + V ++ D A + + G V+ VN D +GG ++DL+ V + +KLG+T P IVMKD+I+HPIQ+AQA+E A G +L A +LG AL D + A MG E IVEVHT A+ ++ + G + M+N WDR+ KLYP +A ++ +PD+ +TIA+GGI ++EQ L G D V GR LV Sbjct: 2 LRRNSNNTHHKLCV-IADMKRRTPTHNPKCDNNVLSYTDAGEVAMNMASVGFDVIFVNVDQINYGGHINDLNKVFLNLRKLGRTKRPAIVMKDIILHPIQIAQAVEMRADGVILNAAILGNALQDLLTACVTMGIEAIVEVHTTADALRSADIGFNHFMINQWDRIKNKLYPTRALEIKEALPDNAITIAAGGIMTMEQVHMLALAGIDGVCFGRRLV 218
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: J4DP27_THEOR (Indole-3-glycerol-phosphate synthase n=2 Tax=Theileria orientalis TaxID=68886 RepID=J4DP27_THEOR) HSP 1 Score: 168 bits (425), Expect = 1.360e-43 Identity = 99/236 (41.95%), Postives = 143/236 (60.59%), Query Frame = 3 Query: 3 QMRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPT-SAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTP-PPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLV 704 Q+RL++ S L LRRN+ Q+ +L+V IADMKRR+PT + V ++ + + + G ++ VNTD +GG ++DL +KLG+ P IVMKD+I+HPIQ+AQA E A G +L A +LG L D + MG E I EVHT AE K+++ G + IMVN WDR+ LYP +A V+ +P++V IA+GGI +++Q +L GYDA+VLGR L+ Sbjct: 106 QLRLNFLQCTSNLKLSDMLRRNSNQKHHKLSV-IADMKRRTPTHNPTCDNNVLSYSNAGEVGLSMASVGFDIIFVNTDEVNYGGHINDLYKTFLELRKLGRRERPAIVMKDIILHPIQIAQAAELRADGVILNAAILGKVLGDLLGTCVTMGIEAIAEVHTVAEALKSIDMGFTHIMVNQWDRIKNVLYPTRALEVKEALPENVTAIAAGGIMTMDQVHQLALAGYDAIVLGRRLI 340
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Match: Q4UDX1_THEAN (Indole-3-glycerol-phosphate synthase n=2 Tax=Theileria annulata TaxID=5874 RepID=Q4UDX1_THEAN) HSP 1 Score: 167 bits (423), Expect = 3.700e-43 Identity = 100/236 (42.37%), Postives = 142/236 (60.17%), Query Frame = 3 Query: 3 QMRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPT-SAELSPEVNAFDDPAAWASQLHTAGAKVLMVNTDGPAWGGSLSDLDAVVAHFKKLGKTP-PPIVMKDMIVHPIQMAQALEKGAAGTVLIACVLGPALCDFMDAATVMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRVTGKLYPKQAGAVRNMIPDHVLTIASGGIESLEQAGRLTDEGYDAVVLGRSLV 704 Q+RL+Y S L L RN+ +L V IADMKRR+PT + V ++ D A + + G V+ VN D +GG ++DL+ V + +KLG+T P IVMKD+I+HPIQ+AQA+E A G +L A +LG AL D + + MG E IVEVHT A+ ++ E G + M+N WDR+ LYP +A ++ ++P++ TIA+GGI ++EQ L G DAV GR LV Sbjct: 126 QLRLNYLQCTSNLKLSDMLSRNSNNTHHKLCV-IADMKRRTPTHNPRCDNNVLSYTDAGEVALNMASVGFDVIFVNVDQKNYGGHINDLNKVFLNLRKLGRTQRPAIVMKDIILHPIQIAQAVEMRADGVILNAAILGNALKDLLTSCITMGIEAIVEVHTTADALRSAEIGFTNFMINQWDRIKNILYPTRALEIKEVLPEYATTIAAGGIMTMEQVHMLALAGIDAVCFGRRLV 360 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14822.3489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14822.3489.1 >prot_L-elsbetiae_contig14822.3489.1 ID=prot_L-elsbetiae_contig14822.3489.1|Name=mRNA_L-elsbetiae_contig14822.3489.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=278bp MRLSYGASESCYALRGALRRNTGQEDDQLAVVIADMKRRSPTSAELSPEVback to top mRNA from alignment at L-elsbetiae_contig14822:518..3764- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14822.3489.1 ID=mRNA_L-elsbetiae_contig14822.3489.1|Name=mRNA_L-elsbetiae_contig14822.3489.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3247bp|location=Sequence derived from alignment at L-elsbetiae_contig14822:518..3764- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14822:518..3764- >mRNA_L-elsbetiae_contig14822.3489.1 ID=mRNA_L-elsbetiae_contig14822.3489.1|Name=mRNA_L-elsbetiae_contig14822.3489.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1668bp|location=Sequence derived from alignment at L-elsbetiae_contig14822:518..3764- (Laminarionema elsbetiae ELsaHSoW15)back to top |