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Homology
BLAST of mRNA_L-elsbetiae_contig1471.3421.1 vs. uniprot
Match: D8LHA4_ECTSI (Similar to canalicular multispecific organic anion transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA4_ECTSI) HSP 1 Score: 203 bits (516), Expect = 3.170e-57 Identity = 118/174 (67.82%), Postives = 131/174 (75.29%), Query Frame = 2
Query: 23 PTTANVELADVSTTTAGGRRVLGEEEDVVPLLLN---SEPLSTCPAEH-VHPLPNSSYTRDDQSWASKIVFSWIDPVLDKSRAGIELQLDDTLLLPAELTAAVLSERFQVAWEALVDRGQPSLALAFRALFFREFFVAGVFRLLSELATIVAPMVLRETILFVEGKATAVPNSL 532
P+T VE ADV T G GEE+D PLL N + P PA VHPLPNSSYTRD SWASK+VFSW+DPVL+KSR G ELQL DTLLLP LTA VLSERF+ +WE LV G+PSLA AFRALFFRE+FVAG FRLL+ELA I APMVLRE ILFVEGKATAVPN++
Sbjct: 8 PSTEAVE-ADVELTGVGE----GEEDDDAPLLRNFGMATPADGAPASPGVHPLPNSSYTRDSHSWASKLVFSWVDPVLEKSRGGRELQLGDTLLLPDGLTADVLSERFRHSWEGLVSGGRPSLASAFRALFFREYFVAGAFRLLTELAKIAAPMVLREVILFVEGKATAVPNNV 176
BLAST of mRNA_L-elsbetiae_contig1471.3421.1 vs. uniprot
Match: A0A6H5JNY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY7_9PHAE) HSP 1 Score: 70.5 bits (171), Expect = 6.990e-13 Identity = 41/79 (51.90%), Postives = 51/79 (64.56%), Query Frame = 2
Query: 26 TTANVELADVSTTTAGGRRVLGEEEDVVPLLLNSE----PLSTCPAEHVHPLPNSSYTRDDQSWASKIVFSWIDPVLDK 250
TT VE ADV T G + GEE+D PLL N + + + VHPLP+SSYTRD SWASK++FSW+DPVL+K
Sbjct: 10 TTEAVE-ADVELTGVGAL-LAGEEDDDAPLLRNYDMATPAVGAAASPGVHPLPSSSYTRDSHSWASKLMFSWVDPVLEK 86
BLAST of mRNA_L-elsbetiae_contig1471.3421.1 vs. uniprot
Match: A0A6P8WSW4_DROAB (multidrug resistance-associated protein 7 n=1 Tax=Drosophila albomicans TaxID=7291 RepID=A0A6P8WSW4_DROAB) HSP 1 Score: 60.1 bits (144), Expect = 2.510e-7 Identity = 34/111 (30.63%), Postives = 60/111 (54.05%), Query Frame = 2
Query: 182 YTRDDQSWASKIVFSWIDPVLDKSRAGIELQLDDTLLLPAELTAAVLSERFQVAWEALVDRGQPSLALAFRALFFREFFVAGVFRLLSELATIVAPMVLRETILFVEGKAT 514
+ +D+ +WAS+ +F W+ P++DK AG +++D LP L LSER +A SL A +F EF++ G+ RL++++++ P++L + E K T
Sbjct: 224 HAQDEANWASRFLFHWVQPLIDKGVAGKLRRIEDLFDLPDALNITRLSERLHLALSQ-----SKSLLRALHKVFGLEFYLIGLLRLVADVSSFAGPLLLGALLKSDESKPT 329
BLAST of mRNA_L-elsbetiae_contig1471.3421.1 vs. uniprot
Match: A0A6P5VPK2_DROOB (multidrug resistance-associated protein 7 n=10 Tax=obscura group TaxID=32355 RepID=A0A6P5VPK2_DROOB) HSP 1 Score: 57.8 bits (138), Expect = 1.560e-6 Identity = 34/99 (34.34%), Postives = 57/99 (57.58%), Query Frame = 2
Query: 182 YTRDDQSWASKIVFSWIDPVLDKSRAGIELQLDDTLLLPAELTAAVLSERFQVAWEALVDRGQPSLALAFRALFFREFFVAGVFRLLSELATIVAPMVL 478
+ +D+ +WAS+ +F W+ P++DK AG +++D LP L LSER +A + + Q SL A F EF++ GV RL+++L+ P++L
Sbjct: 223 HAQDEANWASRFLFYWVQPLIDKGVAGKLRKIEDLFDLPDALNITRLSERLHLA----LSQSQ-SLWRALHKCFGVEFYLIGVLRLVADLSGFAGPLLL 316
BLAST of mRNA_L-elsbetiae_contig1471.3421.1 vs. uniprot
Match: A0A6H5JWW8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW8_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 2.830e-6 Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 2
Query: 410 EFFVAGVFRLLSELATIVAPMVLRETILFVEGKATAVPNSL 532
EF VAG FRLL+ELA I APMVLRE ILFV G ATAVPN++
Sbjct: 8 EFCVAGGFRLLTELAKIAAPMVLREVILFVGGNATAVPNNI 48
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 206.1 |
Seed ortholog evalue | 1.3e-50 |
Seed eggNOG ortholog | 2880.D8LHA4 |
Preferred name | ABCC8 |
KEGG ko | ko:K05033 |
KEGG TC | 3.A.1.208 |
KEGG Pathway | ko02010,map02010 |
Hectar predicted targeting category | other localisation |
EggNOG free text desc. | ATPase activity, coupled to transmembrane movement of substances |
EggNOG OGs | COG1132@1,KOG0054@2759 |
COG Functional cat. | V |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko02000,ko04147 |
Exons | 3 |
Model size | 532 |
Cds size | 516 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815591.7750406-CDS-L-elsbetiae_contig1471:3487..3611 | 1622815591.7750406-CDS-L-elsbetiae_contig1471:3487..3611 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1471 3488..3611 - |
1691682978.3995395-CDS-L-elsbetiae_contig1471:3487..3611 | 1691682978.3995395-CDS-L-elsbetiae_contig1471:3487..3611 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1471 3488..3611 - |
1622815591.7927928-CDS-L-elsbetiae_contig1471:4833..4991 | 1622815591.7927928-CDS-L-elsbetiae_contig1471:4833..4991 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1471 4834..4991 - |
1691682978.4133837-CDS-L-elsbetiae_contig1471:4833..4991 | 1691682978.4133837-CDS-L-elsbetiae_contig1471:4833..4991 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1471 4834..4991 - |
1622815591.8066685-CDS-L-elsbetiae_contig1471:7817..8051 | 1622815591.8066685-CDS-L-elsbetiae_contig1471:7817..8051 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1471 7818..8051 - |
1691682978.4221332-CDS-L-elsbetiae_contig1471:7817..8051 | 1691682978.4221332-CDS-L-elsbetiae_contig1471:7817..8051 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1471 7818..8051 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815591.8179696-UTR-L-elsbetiae_contig1471:8051..8067 | 1622815591.8179696-UTR-L-elsbetiae_contig1471:8051..8067 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1471 8052..8067 - |
1691682978.4308953-UTR-L-elsbetiae_contig1471:8051..8067 | 1691682978.4308953-UTR-L-elsbetiae_contig1471:8051..8067 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1471 8052..8067 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1471.3421.1 >prot_L-elsbetiae_contig1471.3421.1 ID=prot_L-elsbetiae_contig1471.3421.1|Name=mRNA_L-elsbetiae_contig1471.3421.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp
MPPTTANVELADVSTTTAGGRRVLGEEEDVVPLLLNSEPLSTCPAEHVHP LPNSSYTRDDQSWASKIVFSWIDPVLDKSRAGIELQLDDTLLLPAELTAA VLSERFQVAWEALVDRGQPSLALAFRALFFREFFVAGVFRLLSELATIVA PMVLRETILFVEGKATAVPNSL back to topmRNA from alignment at L-elsbetiae_contig1471:3488..8067- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1471.3421.1 ID=mRNA_L-elsbetiae_contig1471.3421.1|Name=mRNA_L-elsbetiae_contig1471.3421.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4580bp|location=Sequence derived from alignment at L-elsbetiae_contig1471:3488..8067- (Laminarionema elsbetiae ELsaHSoW15) CGATAAAAGGTTACCGATGCCTCCAACGACAGCAAATGTGGAGTTGGCGG
ATGTCAGTACAACAACAGCTGGTGGTAGAAGAGTACTGGGAGAAGAGGAG
GACGTTGTTCCCCTGTTGTTGAACTCGGAACCATTGAGCACATGTCCCGC
TGAGCATGTGCATCCGCTCCCCAATTCCTCCTATACCCGGGACGATCAAA
GCTGGGCGTCGAAGATCGTCTTCTCATGGATTGATCCGGTGCTTGACAAG
GTGAGCCACTCCGCTTTACCTTTCCTATTAACTTGTTGTGTGAGATGGAT
GCGTGCGTGTGCACGTAAATTCAGCAATGTGCACATAGCTATCTGGCTGT
CTTCATGTGCGTGCTGTTCTGCAGTTTCGCAGCGGTAGCACGAGCTTGGA
GGCAAGCAAGGCGCAGGGAGAACAACGACATGCGCCCAGAGAAATTCCAA
GCCGAGGTGCTTTTTTCTCGGAGAACATTTTACCTGACTTTTGAAAAAAA
TTGGCGTGCCGCACGCGAGGCTACAACTTCGACTTCGCCGTTGACGAGAG
AAGGGATAGCCAGTACGTTCTCTTTTCGCGATAAAACCCAAGGCAAAGCA
CCGCAGGAGGAAGGTGGGGCAAAAAATAAAAACATAGAAGTTGGTGACAA
TATCACGACATCGCGGAGGGTTTCTCCCCGGAATACATGTTGTTTGACCT
GGCAGAGAACTGCAGGGGAGATGTTGAATCTTCTAATATTGTAGGTGTTT
TTCTACTCGGCCGGCCCAATATTACGTCACTAAATGGAATACCGAAAATT
CTCACGGGAGTCCCGTCTCCAATGTGGGTTAGGTTCCATTTTTGATTATC
TGCTTATCTTTCAAAAACAAAAAGAAGAAAAAACCCCAGTGTTTACCTCT
TCCTGTGTGACCCCGGCGGATACTTCATGCAGTACAAAGAAGGAGCCCCG
CAACGTGCATATTGTACACCGAAATGTGTGGCAGACCCCGAATAAATGGG
ACGTAAACACACACACACACACACACACACACACACAACTAGATATAGCA
GCAGTTGAGGACATAGATAGCATCACCTCCTCCGCGACGTGCTATGTACG
CGACAACGCCAATGCAGACCAAACAAGCGATTGGTGGTATTTGTTCGCTC
TAGTTGTACTTTGGCAGACGAAGCATAGCAGGTTTGCAACCCTCTGGCTA
AAACTCCGGCGCTCGTGTATCTATTTATGTATCTGTCTGTAGAGGGCGGC
TGCTGGTACGAAACGTAACATTAGGTTGAGCCTCATTTTCCTATTTTCGG
CCGAAGCACCAGCCTGCAGCAGTAGTAGCTGATTTTCTTAAAACCAAGTC
TTGTGATCATTGGTCCGTGCAGCATCTTGCCTGTTCATTTCTCAAATGTC
GCATCTCCAGTTCCTACATAGTCTACATTGTGCGCTGCTTCCGTCGCACT
ATCCATCACGCCATGTGCATGCGTCTAAGTGTAACCCTTTACATTTTCTT
GCCCATAGCGTGAGAGGCAGCGTGGTAGGGGTGGGTATATGAGGAGGAGG
AAGCGTTGCTTATTTGCCACAGTCTCTCTGAATTCAACTCAGTTTCTTCT
GTCTTGGAGCTGTCCTGCGCTCAATTTCTGGTGGAGATTTCTTATGTTGT
CGCCTAGAATATCTAATGAGCTAACCTTTTTATTTATTTTGCTCAAAATG
TTCAGCCTCCTTTCTCTCAACGGATTGTTTCTTATATGCGGGCGCCCTCT
GTGTGCAGTCCTGCGTAGTGTATGCCCTGAACCTTTACCCTAACCCCCAA
GCTTGGTTGGTGCGCATCGGGAAGATTATACGTAGGTCGCTGTATCCAGT
GAAGCCGAGTGGCTGGAGCGCGTTTCCAAAACACGAGCGCTGGGGTCGTT
GCGTGCAATCTGCTACGTAAGCAACATCACGTTTTGTCCTATTACGTACA
TATGCAATAGAGCAGACACCCAATCCTAGATGCTGGGTTGGTACAGTTGG
CATTCGCGAGCAGTGAGAGGGCATCGTGCCGGCAAAGCTGTGTTTGGCCA
GCTGTTGCGTGGCAGGAGCGTACGACCATGAAGGCTCGCCCCGTCTGGAG
CAACAGCAGAACTCTAGTGGGACGTTCATCGAGCCGCCGCTTCAATGGCA
AGCAGCATCCCACCCACGGATGCAGTTCACGGAAAGACGGCAACCGCTAC
TGCCATGCTGTGAATGAGTAAACCAATAAACTAATCAGATATTTTGAGAA
CAGCAGCAGTGCCGCTTGACTTTCCCCTGGATATATTGAAATCTAGGGTC
TCCTTGGCTAAGCCCGCCCAAAGCGAAAGCTTAAGCTTCTCGGCATCCGG
GGGAGGGCGCGTAGCCGCGAGTGCTGCTACGTCTGGGGAAAACGCTCCCG
GCGATGTTTCTCAAAATGTACGCTGTGTGTTGGTTGCCCCCTCCACGAGG
TGAAGCATGCTGGACTGGGCGGTTCCTCCACCCCACCCAGGCGACACACC
TTGGCAGCAGAGTCTAGCCTATACCATGCACAGCTGTTTACCATGTAGCT
ACGGTGCGTAATGCCACCGTAGGGCTGCACAGAGTTTGCACCAAGACTTG
CTGCACCAAGTCGTGCAAGGACCGTGGTTCAACCGTAGATATGTACCATA
GATGACACAAGATACCACCCCCCCCCTGGACAAATTTTTACAACTCCATT
TTACTCCGTAACGAAGAGGGTACCATCACTAAACGACACGTTTTCGGACA
GCAATCGACTAGATCTTTCCAACCCCACTCCCTTTCGGCACTGGCGCTCT
TCTTGTTGGGGAAGAATCGACCTTTGAAAAAAACTGTCTAGGGAGGTGGT
ATCTTGTGTAACCTGCGGTACAGGGGCACTCCGTTTTTCGGCAGCATAAA
GGTACAATATGGAACCATCGGCCGTCGTTCTCCCCACGGCTCCATGTCTC
AAGGGGGGAGGCAGTAACCCTGACTACGTCTTTTGTCCAGCGGCGACGAA
ACAGAGAATAACGCAAGTGACCAATTTTATAGCCCCTGCCGCCGGCGCCG
CCGTTGAACACTGCGCAACACCCCAGAGCCGGGCGGGCATTGAGCTGCAG
CTGGACGACACGCTGCTCCTGCCGGCGGAGCTGACGGCCGCGGTTCTCTC
CGAACGGTTCCAAGTCGCGTGGGAGGCGTTGGTCGACAGGGGGCAGCCAT
CGCTTGCTTTGGCGTTCCGAGCGCTGTTTTTTCGGTGAGTGTACTGTACG
AAGTACGTATGTATTTGCATCAGCAGACAAAGGGAAGACAACCCTGAAAT
CGTATACTCGGGTGTCCTGCGTAAGCCCTTTTGTCGATATGTTTTAGTTC
CAAATATCAGCAGCAGTGTTGCGTCCTATGCTTTGTCCTTTTCTGCGCGG
TCCTTGGTTTCTTTTTTAAAAATAAACAAATAATCAAATTTGTGGGCGTG
TGTCGAGCCATCGTTGTTGTTGTTGCTGCTGCTGCTGTTCCTCATGAGCT
GCCGAGAAGAAAAGGCCTCAGCCGACGTCGACGCCATGTTTCAGACTTGG
TGCCCCTATTTTTTATTTTGTTTTTCTTCTGGTGGGCATGTAAAGAATGG
CGATATACGGCATTGCAGAGGGAACGAAAGAACCCTACAGTAATTGTGGC
CCGGAGTCAATAGACGGTGGTTTGTGGGCGGATGCTCTGTTTCTTGTCTG
GGGGTCAATGCTGAGCAAGCAATAGCGTACTGAACAAACATCTCAGTCGT
TTGTTTTGTCTTGGCACCATCTGTCTGTTTGAGTTGAGGTGTCTTTATCG
CGCCGACTTAAAATCGCTTGAAACAGATTGAACGTACCTGATTTGTTTTC
TTTGCTTTGCGGAACCTTCGGGTCCATCTTATGTATTTTATGTATTTTTC
GGTTTTTTAGTGTTCCCTTTATTGGGGTAAGTTATCCTGTCACCACGGGA
ATCGACTGCGCCAAGTGTTGGATTAGTACGGGCTCATGGAGGTACTGGAT
AGAGAGATCGGAACGGTTTTTAATGTGAAGATGACAACAACAACAACAAC
AACAACAACAACTGCGTGCCGCATCTGTGCACCGCCTGGGGAACGTACGG
GAGTAGCTGGGGCTACTAATGCTGCTGTGCACAGCAGCAAAGAAAACAGA
GTACGTGTTGCGCGACTGCGAGTGCACGAACTTGTCTTTTTGTCACGCCG
CGAAACCACCTCTCGCTCGTCAGCTCCCCTTTTGTTTCGCCCAAAGCACC
TTACACACACATCGAAAACAAATTGCTTTGAAAAACAAACGATGTAGGTA
TCTATGTATCAAAGACGGGACTAGCCTCCCCACATGAGCGAGACGGGGGG
CTCAGTGGTGAAACGTGGGTTTTGTAAATACTCCTACACAGCAAGGTGAT
GTAGGTACATACATCCCCATCCCTTTTTTTTGCGACCCGAACCCCCCCCC
CCGTAGCGAGTTCTTCGTGGCCGGAGTGTTTCGGCTGCTGTCGGAGCTGG
CCACGATAGTGGCGCCGATGGTGCTGCGAGAGACCATCTTGTTCGTGGAG
GGCAAGGCGACGGCCGTGCCTAACAGCCTC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1471:3488..8067- >mRNA_L-elsbetiae_contig1471.3421.1 ID=mRNA_L-elsbetiae_contig1471.3421.1|Name=mRNA_L-elsbetiae_contig1471.3421.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1032bp|location=Sequence derived from alignment at L-elsbetiae_contig1471:3488..8067- (Laminarionema elsbetiae ELsaHSoW15) ATGCCTCCAACGACAGCAAATGTGGAGTTGGCGGATGTCAGTACAACAAC AGCTGGTGGTAGAAGAGTACTGGGAGAAGAGGAGGACGTTGTTCCCCTGT TGTTGAACTCGGAACCATTGAGCACATGTCCCGCTGAGCATGTGCATCCG CTCCCCAATTCCTCCTATACCCGGGACGATCAAAGCTGGGCGTCGAAGAT CGTCTTCTCATGGATTGATCCGGTGCTTGACAAGATGCCTCCAACGACAG CAAATGTGGAGTTGGCGGATGTCAGTACAACAACAGCTGGTGGTAGAAGA GTACTGGGAGAAGAGGAGGACGTTGTTCCCCTGTTGTTGAACTCGGAACC ATTGAGCACATGTCCCGCTGAGCATGTGCATCCGCTCCCCAATTCCTCCT ATACCCGGGACGATCAAAGCTGGGCGTCGAAGATCGTCTTCTCATGGATT GATCCGGTGCTTGACAAGAGCCGGGCGGGCATTGAGCTGCAGCTGGACGA CACGCTGCTCCTGCCGGCGGAGCTGACGGCCGCGGTTCTCTCCGAACGGT TCCAAGTCGCGTGGGAGGCGTTGGTCGACAGGGGGCAGCCATCGCTTGCT TTGGCGTTCCGAGCGCTGTTTTTTCGAGCCGGGCGGGCATTGAGCTGCAG CTGGACGACACGCTGCTCCTGCCGGCGGAGCTGACGGCCGCGGTTCTCTC CGAACGGTTCCAAGTCGCGTGGGAGGCGTTGGTCGACAGGGGGCAGCCAT CGCTTGCTTTGGCGTTCCGAGCGCTGTTTTTTCGCGAGTTCTTCGTGGCC GGAGTGTTTCGGCTGCTGTCGGAGCTGGCCACGATAGTGGCGCCGATGGT GCTGCGAGAGACCATCTTGTTCGTGGAGGGCAAGGCGACGGCCGTGCCTA ACAGCCTCCGAGTTCTTCGTGGCCGGAGTGTTTCGGCTGCTGTCGGAGCT GGCCACGATAGTGGCGCCGATGGTGCTGCGAGAGACCATCTTGTTCGTGG AGGGCAAGGCGACGGCCGTGCCTAACAGCCTC back to top
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