mRNA_L-elsbetiae_contig1461.3366.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: D8LSN8_ECTSI (WD-40 repeat family protein / mitotic checkpoint protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN8_ECTSI) HSP 1 Score: 410 bits (1053), Expect = 5.340e-143 Identity = 193/222 (86.94%), Postives = 210/222 (94.59%), Query Frame = 1 Query: 1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPRLKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663 TLRLYDARQN+ KRV+ KMAQLDCCFKD++ATGFCGGLDKQV+QVDLETG VT+LGSH+K VRCVEYN STGT+L+GGWDAKLN+WDPR KQ LVQSRPAPGKVFTMSVSD RAV+GTSNRHIWVYDMRSLAEPEQRRVSSLK+QTRCVR+FPDQ+GYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGD+VFPVNAMAFHPVYGTFA+GGCD V+ W Sbjct: 3 TLRLYDARQNLSKRVIPSKMAQLDCCFKDTSATGFCGGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRSKQALVQSRPAPGKVFTMSVSDMRAVVGTSNRHIWVYDMRSLAEPEQRRVSSLKYQTRCVRIFPDQKGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDQVFPVNAMAFHPVYGTFASGGCDKMVNIW 224
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A7S2UWG3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWG3_9STRA) HSP 1 Score: 268 bits (684), Expect = 1.150e-86 Identity = 126/216 (58.33%), Postives = 156/216 (72.22%), Query Frame = 1 Query: 10 LYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPRLKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSL-AEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPVYGTFATGGCDNV 654 LYDA NV CK A LDCCF D GFCGGLD+ ++ D G+ +VLGSH +RCVE++ +G + +GGWD ++ +WDPR P VQS P PGKVFTM++SD R V+GTS R + YDMR L A PE +R SSLK+QTR +R F D+ GYA+GS+EGRVAVE+FD S E+Q KYAFKCHR D +FPVNAMAFHP++GTFATGGCD + Sbjct: 20 LYDAGANVRLASFPCKAAVLDCCFWDPQH-GFCGGLDRSLKMFDFNNGSESVLGSHNGAIRCVEFSLHSGLVFTGGWDGQMLAWDPRSPSPCVQSLPQPGKVFTMALSDNRVVVGTSGRQVVTYDMRRLTAGPETQRESSLKYQTRVIRCFNDRTGYALGSIEGRVAVEFFDPSPEAQAKKYAFKCHRTADTIFPVNAMAFHPIFGTFATGGCDGI 234
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: S8CXE7_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CXE7_9LAMI) HSP 1 Score: 240 bits (613), Expect = 1.230e-75 Identity = 118/230 (51.30%), Postives = 161/230 (70.00%), Query Frame = 1 Query: 1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPR----LKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663 ++RLYDA NV K ++ A LDCCF D ++ GF D +V+++ VLG H+ PVRC+EY+ +TG +++G WD L WDPR ++ LV + P P +V++MS+S R V+ T+ RH+ VYD+R++++PEQRR SSLK+QTRCVR +P+ GYA+ SVEGRVA+E+FD S+ Q KYAFKCHRK D V+PVNA+AFHP+YGTFATGGCD V+ W Sbjct: 32 SIRLYDASTNVLKGELIHGGAVLDCCFHDDSS-GFSACADNKVRRLVFSYNREDVLGKHDAPVRCIEYSYTTGQVITGSWDKTLKCWDPRGASGQERSLVGAYPQPERVYSMSLSGNRLVVATAGRHVNVYDIRNMSQPEQRRESSLKYQTRCVRCYPNGLGYALSSVEGRVAMEFFDLSEAGQSKKYAFKCHRKSEAGKDIVYPVNAIAFHPIYGTFATGGCDGYVNVW 260
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A176VNZ6_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VNZ6_MARPO) HSP 1 Score: 239 bits (611), Expect = 2.860e-75 Identity = 118/225 (52.44%), Postives = 155/225 (68.89%), Query Frame = 1 Query: 4 LRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPRLKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663 +RLYDA NV K + LDCCF D A+ GF G D+ V++ D TG +LG+H+ PV+CVEY+ +TG ++SG WD L WD R ++ P P +V++MS+ V+ T+ RHI VYD+R++++ EQRR SSLK+QTRCVR +P+ GYA+ SVEGRVA+E+FD S+ Q KYAFKCHRK D V+PVNA+AFHPVYGTFATGGCD V+ W Sbjct: 41 VRLYDASSNVLKGQFAHRGPVLDCCFHDDAS-GFSAGADRTVRRYDFNTGREDILGTHDAPVKCVEYSHTTGQVISGSWDKTLRCWDARAASG-QETYPQPERVYSMSLVGHHLVVATAGRHINVYDLRNMSQAEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAGQAKKYAFKCHRKSEAGRDTVYPVNAIAFHPVYGTFATGGCDGYVNVW 263
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A166IB96_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166IB96_DAUCS) HSP 1 Score: 239 bits (611), Expect = 3.530e-75 Identity = 118/230 (51.30%), Postives = 160/230 (69.57%), Query Frame = 1 Query: 1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPR----LKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663 T+RLYDA N+ K + A LDCCF D ++ GF D V+++ G VLG+H+ PVRC+EY+ +TG +++G WD L WDPR ++ LV + +V+++SV+ R V T+ RH+ VYD+R++++PEQRR SSLK+QTRCVR +P+Q GYA+ SVEGRVA+E+FDTS+ Q KYAFKCHRK D V+PVNA+AFHP+YGTFATGGCD V+ W Sbjct: 40 TVRLYDAAANLLKGEFMHSAAVLDCCFHDDSS-GFSASADNTVRRLVFGYGREDVLGTHDAPVRCIEYSYATGQVVTGSWDKNLKCWDPRGASGQERTLVGTYNQLERVYSLSVNGHRLVAATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNQTGYALSSVEGRVAMEFFDTSEAGQSKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVW 268
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A0K9PZJ4_ZOSMR (Putative Mitotic checkpoint protein bub3 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PZJ4_ZOSMR) HSP 1 Score: 239 bits (610), Expect = 6.520e-75 Identity = 116/226 (51.33%), Postives = 157/226 (69.47%), Query Frame = 1 Query: 1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPR----LKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPVYGTFATGGCDNV 654 T+RLYDAR+NV K A LDCCF D ++ GF G D V++ TG +LG H+ PVRCVEY+ + G +++G WD L WDPR ++ LV + P +V+++++ R V+ T+ RH+ +YD+R++++PEQRR SSLK+QTRCVR +P+ GYA+ SVEGRVA+E+FDTS Q KYAFKCHRK D V+PVNA+AFHP+YGTF+TGGCD V Sbjct: 41 TVRLYDARENVLKGEFFHSAAVLDCCFHDDSS-GFSAGADHTVRRHVFSTGKEEILGRHKAPVRCVEYSHAAGQVITGSWDKTLKCWDPRGASGQERTLVGTYFQPERVYSIALVGTRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDTSDSGQAKKYAFKCHRKTEDGKDFVYPVNAIAFHPIYGTFSTGGCDGV 265
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A835ZK40_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK40_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.490e-74 Identity = 123/225 (54.67%), Postives = 147/225 (65.33%), Query Frame = 1 Query: 1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTV-LGSHEKPVRCVEYNTST--GTLLSGGWDAKLNSWDPRLKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663 T+RLYDAR+N + V K A LD F D GF GGLDK V+ D V LG H PVRCVEY + T L++G WD + WD R L + PGKV++M V+ + V+G SNR + VYD+R L PEQ R SSLKFQTRC+++ PD GY + SVEGRVAVEY D S E Q KYAFKCHR+GD +FPVNAMAFHPV+GTFATGGCD V+ W Sbjct: 39 TVRLYDARRNATQGVFQSKGAVLDAAFLDDTK-GFMGGLDKAVKMFDFGGAAGAVALGVHSAPVRCVEYLSGTHHDQLVTGSWDKTVKLWDHRASTFLRSTLQMPGKVYSMDVNGSKLVVGCSNRFVVVYDLRKLDRPEQMRESSLKFQTRCIKLMPDNSGYVLSSVEGRVAVEYLDPSPEVQSKKYAFKCHRQGDTIFPVNAMAFHPVFGTFATGGCDGTVNVW 262
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A7S2HTA8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HTA8_9STRA) HSP 1 Score: 237 bits (605), Expect = 1.700e-74 Identity = 122/224 (54.46%), Postives = 156/224 (69.64%), Query Frame = 1 Query: 4 LRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTV-TVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPRLK--QPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663 LRLYDA Q V K LD CF D+ G GGLD+ V+ DL G TVLGSH K +RC+EY+ L SGGWDAK+N+WDPR Q + + PGK FTM++++ R V+GT++R I YD+R+L++PE R SSLK+QTRC+R FPD EG+A+ S+EGRVA+EYF S E++ KYAFKCHR + VFPVNA+AFHP++GTFATGGCD V+ W Sbjct: 37 LRLYDASQKQLVHVFEAKGPLLDGCFLDNTH-GVAGGLDQAVRVFDLNVGGAGTVLGSHGKAIRCLEYSPRNELLFSGGWDAKVNAWDPRAASGQRALATLDLPGKAFTMALTETRIVVGTADRRIVCYDIRNLSQPEFSRESSLKYQTRCIRAFPDGEGFALSSIEGRVAIEYF--SPEAEAKKYAFKCHRVMNMVFPVNAIAFHPIHGTFATGGCDGYVNVW 257
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A059AM78_EUCGR (Uncharacterized protein (Fragment) n=5 Tax=rosids TaxID=71275 RepID=A0A059AM78_EUCGR) HSP 1 Score: 239 bits (609), Expect = 1.970e-74 Identity = 117/230 (50.87%), Postives = 158/230 (68.70%), Query Frame = 1 Query: 1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPR----LKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663 T+RLYDA NV + L A LDCCF D ++ GF D V+++ G +LG H+ PVRCVEY+ + G +++G WD L WDPR + LV + P P +V+++S+ R V+ T+ RH+ +YD+R++++PEQRR SSLK+QTRCVR +P+ GYA+ SVEGRVA+E+FD S+ SQ KYAFKCHRK D V+PVNA+AFHP+YGTFATGGCD V+ W Sbjct: 75 TVRLYDASANVLRGEFLHGGAVLDCCFHDDSS-GFSASADHAVRRLVFNAGKEDILGKHDAPVRCVEYSYAAGQVITGSWDKTLKCWDPRGASGQDRTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVW 303
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A8J5WWH9_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WWH9_ZIZPA) HSP 1 Score: 235 bits (600), Expect = 5.780e-74 Identity = 113/230 (49.13%), Postives = 159/230 (69.13%), Query Frame = 1 Query: 1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPR----LKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663 T+RLYDA NV K + A LDCCF D ++ GF G D V+++ + VLG H+ PVRC+EY+ + G +++G WD + WDPR ++ LV + P +V+++S+ R V+ T+ RH+ +YD+R++++PEQ+R SSLK+QTRCVR FP+ GYA+ SVEGRV++E+FD S+ +Q KYAFKCHRK D V+PVNA+AFHP+YGTFATGGCD V+ W Sbjct: 45 TVRLYDADANVLKGEFVHPGAVLDCCFHDDSS-GFSAGADHTVRRLVFSSAKEDVLGRHDAPVRCIEYSYAAGQVITGSWDKTIKCWDPRGVSGTERTLVGTYPQQERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQKRDSSLKYQTRCVRCFPNGTGYALSSVEGRVSMEFFDLSESAQSKKYAFKCHRKSEAGRDTVYPVNAIAFHPIYGTFATGGCDGFVNVW 273 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1461.3366.1 >prot_L-elsbetiae_contig1461.3366.1 ID=prot_L-elsbetiae_contig1461.3366.1|Name=mRNA_L-elsbetiae_contig1461.3366.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETback to top mRNA from alignment at L-elsbetiae_contig1461:300..3483- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1461.3366.1 ID=mRNA_L-elsbetiae_contig1461.3366.1|Name=mRNA_L-elsbetiae_contig1461.3366.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3184bp|location=Sequence derived from alignment at L-elsbetiae_contig1461:300..3483- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1461:300..3483- >mRNA_L-elsbetiae_contig1461.3366.1 ID=mRNA_L-elsbetiae_contig1461.3366.1|Name=mRNA_L-elsbetiae_contig1461.3366.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1374bp|location=Sequence derived from alignment at L-elsbetiae_contig1461:300..3483- (Laminarionema elsbetiae ELsaHSoW15)back to top |