mRNA_L-elsbetiae_contig1461.3366.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1461.3366.1
Unique NamemRNA_L-elsbetiae_contig1461.3366.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: D8LSN8_ECTSI (WD-40 repeat family protein / mitotic checkpoint protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN8_ECTSI)

HSP 1 Score: 410 bits (1053), Expect = 5.340e-143
Identity = 193/222 (86.94%), Postives = 210/222 (94.59%), Query Frame = 1
Query:    1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPRLKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663
            TLRLYDARQN+ KRV+  KMAQLDCCFKD++ATGFCGGLDKQV+QVDLETG VT+LGSH+K VRCVEYN STGT+L+GGWDAKLN+WDPR KQ LVQSRPAPGKVFTMSVSD RAV+GTSNRHIWVYDMRSLAEPEQRRVSSLK+QTRCVR+FPDQ+GYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGD+VFPVNAMAFHPVYGTFA+GGCD  V+ W
Sbjct:    3 TLRLYDARQNLSKRVIPSKMAQLDCCFKDTSATGFCGGLDKQVKQVDLETGAVTLLGSHDKAVRCVEYNASTGTVLTGGWDAKLNAWDPRSKQALVQSRPAPGKVFTMSVSDMRAVVGTSNRHIWVYDMRSLAEPEQRRVSSLKYQTRCVRIFPDQKGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDQVFPVNAMAFHPVYGTFASGGCDKMVNIW 224          
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A7S2UWG3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWG3_9STRA)

HSP 1 Score: 268 bits (684), Expect = 1.150e-86
Identity = 126/216 (58.33%), Postives = 156/216 (72.22%), Query Frame = 1
Query:   10 LYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPRLKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSL-AEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPVYGTFATGGCDNV 654
            LYDA  NV      CK A LDCCF D    GFCGGLD+ ++  D   G+ +VLGSH   +RCVE++  +G + +GGWD ++ +WDPR   P VQS P PGKVFTM++SD R V+GTS R +  YDMR L A PE +R SSLK+QTR +R F D+ GYA+GS+EGRVAVE+FD S E+Q  KYAFKCHR  D +FPVNAMAFHP++GTFATGGCD +
Sbjct:   20 LYDAGANVRLASFPCKAAVLDCCFWDPQH-GFCGGLDRSLKMFDFNNGSESVLGSHNGAIRCVEFSLHSGLVFTGGWDGQMLAWDPRSPSPCVQSLPQPGKVFTMALSDNRVVVGTSGRQVVTYDMRRLTAGPETQRESSLKYQTRVIRCFNDRTGYALGSIEGRVAVEFFDPSPEAQAKKYAFKCHRTADTIFPVNAMAFHPIFGTFATGGCDGI 234          
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: S8CXE7_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CXE7_9LAMI)

HSP 1 Score: 240 bits (613), Expect = 1.230e-75
Identity = 118/230 (51.30%), Postives = 161/230 (70.00%), Query Frame = 1
Query:    1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPR----LKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663
            ++RLYDA  NV K  ++   A LDCCF D ++ GF    D +V+++        VLG H+ PVRC+EY+ +TG +++G WD  L  WDPR     ++ LV + P P +V++MS+S  R V+ T+ RH+ VYD+R++++PEQRR SSLK+QTRCVR +P+  GYA+ SVEGRVA+E+FD S+  Q  KYAFKCHRK     D V+PVNA+AFHP+YGTFATGGCD  V+ W
Sbjct:   32 SIRLYDASTNVLKGELIHGGAVLDCCFHDDSS-GFSACADNKVRRLVFSYNREDVLGKHDAPVRCIEYSYTTGQVITGSWDKTLKCWDPRGASGQERSLVGAYPQPERVYSMSLSGNRLVVATAGRHVNVYDIRNMSQPEQRRESSLKYQTRCVRCYPNGLGYALSSVEGRVAMEFFDLSEAGQSKKYAFKCHRKSEAGKDIVYPVNAIAFHPIYGTFATGGCDGYVNVW 260          
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A176VNZ6_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VNZ6_MARPO)

HSP 1 Score: 239 bits (611), Expect = 2.860e-75
Identity = 118/225 (52.44%), Postives = 155/225 (68.89%), Query Frame = 1
Query:    4 LRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPRLKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663
            +RLYDA  NV K     +   LDCCF D A+ GF  G D+ V++ D  TG   +LG+H+ PV+CVEY+ +TG ++SG WD  L  WD R      ++ P P +V++MS+     V+ T+ RHI VYD+R++++ EQRR SSLK+QTRCVR +P+  GYA+ SVEGRVA+E+FD S+  Q  KYAFKCHRK     D V+PVNA+AFHPVYGTFATGGCD  V+ W
Sbjct:   41 VRLYDASSNVLKGQFAHRGPVLDCCFHDDAS-GFSAGADRTVRRYDFNTGREDILGTHDAPVKCVEYSHTTGQVISGSWDKTLRCWDARAASG-QETYPQPERVYSMSLVGHHLVVATAGRHINVYDLRNMSQAEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAGQAKKYAFKCHRKSEAGRDTVYPVNAIAFHPVYGTFATGGCDGYVNVW 263          
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A166IB96_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166IB96_DAUCS)

HSP 1 Score: 239 bits (611), Expect = 3.530e-75
Identity = 118/230 (51.30%), Postives = 160/230 (69.57%), Query Frame = 1
Query:    1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPR----LKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663
            T+RLYDA  N+ K   +   A LDCCF D ++ GF    D  V+++    G   VLG+H+ PVRC+EY+ +TG +++G WD  L  WDPR     ++ LV +     +V+++SV+  R V  T+ RH+ VYD+R++++PEQRR SSLK+QTRCVR +P+Q GYA+ SVEGRVA+E+FDTS+  Q  KYAFKCHRK     D V+PVNA+AFHP+YGTFATGGCD  V+ W
Sbjct:   40 TVRLYDAAANLLKGEFMHSAAVLDCCFHDDSS-GFSASADNTVRRLVFGYGREDVLGTHDAPVRCIEYSYATGQVVTGSWDKNLKCWDPRGASGQERTLVGTYNQLERVYSLSVNGHRLVAATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNQTGYALSSVEGRVAMEFFDTSEAGQSKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVW 268          
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A0K9PZJ4_ZOSMR (Putative Mitotic checkpoint protein bub3 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PZJ4_ZOSMR)

HSP 1 Score: 239 bits (610), Expect = 6.520e-75
Identity = 116/226 (51.33%), Postives = 157/226 (69.47%), Query Frame = 1
Query:    1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPR----LKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPVYGTFATGGCDNV 654
            T+RLYDAR+NV K       A LDCCF D ++ GF  G D  V++    TG   +LG H+ PVRCVEY+ + G +++G WD  L  WDPR     ++ LV +   P +V+++++   R V+ T+ RH+ +YD+R++++PEQRR SSLK+QTRCVR +P+  GYA+ SVEGRVA+E+FDTS   Q  KYAFKCHRK     D V+PVNA+AFHP+YGTF+TGGCD V
Sbjct:   41 TVRLYDARENVLKGEFFHSAAVLDCCFHDDSS-GFSAGADHTVRRHVFSTGKEEILGRHKAPVRCVEYSHAAGQVITGSWDKTLKCWDPRGASGQERTLVGTYFQPERVYSIALVGTRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDTSDSGQAKKYAFKCHRKTEDGKDFVYPVNAIAFHPIYGTFSTGGCDGV 265          
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A835ZK40_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK40_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.490e-74
Identity = 123/225 (54.67%), Postives = 147/225 (65.33%), Query Frame = 1
Query:    1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTV-LGSHEKPVRCVEYNTST--GTLLSGGWDAKLNSWDPRLKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663
            T+RLYDAR+N  + V   K A LD  F D    GF GGLDK V+  D       V LG H  PVRCVEY + T    L++G WD  +  WD R    L  +   PGKV++M V+  + V+G SNR + VYD+R L  PEQ R SSLKFQTRC+++ PD  GY + SVEGRVAVEY D S E Q  KYAFKCHR+GD +FPVNAMAFHPV+GTFATGGCD  V+ W
Sbjct:   39 TVRLYDARRNATQGVFQSKGAVLDAAFLDDTK-GFMGGLDKAVKMFDFGGAAGAVALGVHSAPVRCVEYLSGTHHDQLVTGSWDKTVKLWDHRASTFLRSTLQMPGKVYSMDVNGSKLVVGCSNRFVVVYDLRKLDRPEQMRESSLKFQTRCIKLMPDNSGYVLSSVEGRVAVEYLDPSPEVQSKKYAFKCHRQGDTIFPVNAMAFHPVFGTFATGGCDGTVNVW 262          
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A7S2HTA8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HTA8_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.700e-74
Identity = 122/224 (54.46%), Postives = 156/224 (69.64%), Query Frame = 1
Query:    4 LRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTV-TVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPRLK--QPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663
            LRLYDA Q     V   K   LD CF D+   G  GGLD+ V+  DL  G   TVLGSH K +RC+EY+     L SGGWDAK+N+WDPR    Q  + +   PGK FTM++++ R V+GT++R I  YD+R+L++PE  R SSLK+QTRC+R FPD EG+A+ S+EGRVA+EYF  S E++  KYAFKCHR  + VFPVNA+AFHP++GTFATGGCD  V+ W
Sbjct:   37 LRLYDASQKQLVHVFEAKGPLLDGCFLDNTH-GVAGGLDQAVRVFDLNVGGAGTVLGSHGKAIRCLEYSPRNELLFSGGWDAKVNAWDPRAASGQRALATLDLPGKAFTMALTETRIVVGTADRRIVCYDIRNLSQPEFSRESSLKYQTRCIRAFPDGEGFALSSIEGRVAIEYF--SPEAEAKKYAFKCHRVMNMVFPVNAIAFHPIHGTFATGGCDGYVNVW 257          
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A059AM78_EUCGR (Uncharacterized protein (Fragment) n=5 Tax=rosids TaxID=71275 RepID=A0A059AM78_EUCGR)

HSP 1 Score: 239 bits (609), Expect = 1.970e-74
Identity = 117/230 (50.87%), Postives = 158/230 (68.70%), Query Frame = 1
Query:    1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPR----LKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663
            T+RLYDA  NV +   L   A LDCCF D ++ GF    D  V+++    G   +LG H+ PVRCVEY+ + G +++G WD  L  WDPR      + LV + P P +V+++S+   R V+ T+ RH+ +YD+R++++PEQRR SSLK+QTRCVR +P+  GYA+ SVEGRVA+E+FD S+ SQ  KYAFKCHRK     D V+PVNA+AFHP+YGTFATGGCD  V+ W
Sbjct:   75 TVRLYDASANVLRGEFLHGGAVLDCCFHDDSS-GFSASADHAVRRLVFNAGKEDILGKHDAPVRCVEYSYAAGQVITGSWDKTLKCWDPRGASGQDRTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVW 303          
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Match: A0A8J5WWH9_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WWH9_ZIZPA)

HSP 1 Score: 235 bits (600), Expect = 5.780e-74
Identity = 113/230 (49.13%), Postives = 159/230 (69.13%), Query Frame = 1
Query:    1 TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLETGTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPR----LKQPLVQSRPAPGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCVRVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKG----DKVFPVNAMAFHPVYGTFATGGCDN-VSCW 663
            T+RLYDA  NV K   +   A LDCCF D ++ GF  G D  V+++   +    VLG H+ PVRC+EY+ + G +++G WD  +  WDPR     ++ LV + P   +V+++S+   R V+ T+ RH+ +YD+R++++PEQ+R SSLK+QTRCVR FP+  GYA+ SVEGRV++E+FD S+ +Q  KYAFKCHRK     D V+PVNA+AFHP+YGTFATGGCD  V+ W
Sbjct:   45 TVRLYDADANVLKGEFVHPGAVLDCCFHDDSS-GFSAGADHTVRRLVFSSAKEDVLGRHDAPVRCIEYSYAAGQVITGSWDKTIKCWDPRGVSGTERTLVGTYPQQERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQKRDSSLKYQTRCVRCFPNGTGYALSSVEGRVSMEFFDLSESAQSKKYAFKCHRKSEAGRDTVYPVNAIAFHPIYGTFATGGCDGFVNVW 273          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1461.3366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSN8_ECTSI5.340e-14386.94WD-40 repeat family protein / mitotic checkpoint p... [more]
A0A7S2UWG3_9STRA1.150e-8658.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
S8CXE7_9LAMI1.230e-7551.30Uncharacterized protein (Fragment) n=1 Tax=Genlise... [more]
A0A176VNZ6_MARPO2.860e-7552.44Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A166IB96_DAUCS3.530e-7551.30Uncharacterized protein n=1 Tax=Daucus carota subs... [more]
A0A0K9PZJ4_ZOSMR6.520e-7551.33Putative Mitotic checkpoint protein bub3 n=1 Tax=Z... [more]
A0A835ZK40_9STRA1.490e-7454.67WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2HTA8_9STRA1.700e-7454.46Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A059AM78_EUCGR1.970e-7450.87Uncharacterized protein (Fragment) n=5 Tax=rosids ... [more]
A0A8J5WWH9_ZIZPA5.780e-7449.13Uncharacterized protein n=1 Tax=Zizania palustris ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1461contigL-elsbetiae_contig1461:300..3483 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score407.5
Seed ortholog evalue4e-111
Seed eggNOG ortholog2880.D8LSN8
Preferred nameBUB3
KEGG koko:K02180,ko:K04532,ko:K14298
KEGG TC1.I.1
KEGG Pathwayko03013,ko04110,ko04111,ko05010,ko05164,ko05166,map03013,map04110,map04111,map05010,map05164,map05166
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000228,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000793,GO:0000794,GO:0000819,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005829,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007088,GO:0007093,GO:0007094,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0008608,GO:0009056,GO:0009057,GO:0009790,GO:0009792,GO:0009987,GO:0010498,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0016043,GO:0019538,GO:0019941,GO:0022402,GO:0022414,GO:0023052,GO:0030071,GO:0030163,GO:0031145,GO:0031570,GO:0031577,GO:0031974,GO:0031981,GO:0032182,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033313,GO:0033316,GO:0033597,GO:0034613,GO:0035556,GO:0040020,GO:0043130,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044774,GO:0044779,GO:0045786,GO:0045835,GO:0045839,GO:0045841,GO:0045930,GO:0048285,GO:0048519,GO:0048523,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051179,GO:0051276,GO:0051321,GO:0051445,GO:0051447,GO:0051603,GO:0051641,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0065007,GO:0070013,GO:0070727,GO:0071173,GO:0071174,GO:0071704,GO:0071840,GO:0072395,GO:0072413,GO:0072416,GO:0072477,GO:0072480,GO:0072486,GO:0098687,GO:0098813,GO:0140014,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1901993,GO:1901994,GO:1902099,GO:1902100,GO:1902102,GO:1902103,GO:1903046,GO:1903047,GO:1905132,GO:1905133,GO:1905818,GO:1905819,GO:1990298,GO:2000241,GO:2000242,GO:2000816,GO:2001251
EggNOG free text desc.spindle assembly checkpoint
EggNOG OGsKOG1036@1,KOG1036@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03036,ko03041,ko04121
Ec32 ortholog descriptionWD40-repeat-containing domain
Ec32 orthologEc-15_003170.1
Exons4
Model size687
Cds size687
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1461.3366.1prot_L-elsbetiae_contig1461.3366.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1461 300..3483 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815587.4194078-CDS-L-elsbetiae_contig1461:299..4551622815587.4194078-CDS-L-elsbetiae_contig1461:299..455Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1461 300..455 -
1691682975.8854487-CDS-L-elsbetiae_contig1461:299..4551691682975.8854487-CDS-L-elsbetiae_contig1461:299..455Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1461 300..455 -
1622815587.4320478-CDS-L-elsbetiae_contig1461:1526..17451622815587.4320478-CDS-L-elsbetiae_contig1461:1526..1745Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1461 1527..1745 -
1691682975.8990722-CDS-L-elsbetiae_contig1461:1526..17451691682975.8990722-CDS-L-elsbetiae_contig1461:1526..1745Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1461 1527..1745 -
1622815587.443194-CDS-L-elsbetiae_contig1461:2703..28811622815587.443194-CDS-L-elsbetiae_contig1461:2703..2881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1461 2704..2881 -
1691682975.9074109-CDS-L-elsbetiae_contig1461:2703..28811691682975.9074109-CDS-L-elsbetiae_contig1461:2703..2881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1461 2704..2881 -
1622815587.4532979-CDS-L-elsbetiae_contig1461:3349..34831622815587.4532979-CDS-L-elsbetiae_contig1461:3349..3483Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1461 3350..3483 -
1691682975.9188054-CDS-L-elsbetiae_contig1461:3349..34831691682975.9188054-CDS-L-elsbetiae_contig1461:3349..3483Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1461 3350..3483 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1461.3366.1

>prot_L-elsbetiae_contig1461.3366.1 ID=prot_L-elsbetiae_contig1461.3366.1|Name=mRNA_L-elsbetiae_contig1461.3366.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp
TLRLYDARQNVPKRVVLCKMAQLDCCFKDSAATGFCGGLDKQVQQVDLET
GTVTVLGSHEKPVRCVEYNTSTGTLLSGGWDAKLNSWDPRLKQPLVQSRP
APGKVFTMSVSDRRAVIGTSNRHIWVYDMRSLAEPEQRRVSSLKFQTRCV
RVFPDQEGYAVGSVEGRVAVEYFDTSKESQDNKYAFKCHRKGDKVFPVNA
MAFHPVYGTFATGGCDNVSCWCCRRRPS*
back to top

mRNA from alignment at L-elsbetiae_contig1461:300..3483-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1461.3366.1 ID=mRNA_L-elsbetiae_contig1461.3366.1|Name=mRNA_L-elsbetiae_contig1461.3366.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3184bp|location=Sequence derived from alignment at L-elsbetiae_contig1461:300..3483- (Laminarionema elsbetiae ELsaHSoW15)
ACGCTGAGGCTGTACGACGCGCGGCAGAACGTGCCGAAGCGAGTGGTACT GTGCAAGATGGCGCAGCTGGACTGCTGCTTCAAGGACAGCGCGGCGACGG GCTTCTGCGGCGGCCTGGACAAACAAGTCCAGCAGTGAGTTGGTGCTGGT GCTGGTGCTATCGGGTTTTGCTTTATCACGTAAACATGATGATGAAGGAA GATTGTCATTGTTGTTGTTGTCGTTGGTGGTGGGGGTGGTGGTGGGTGGT GGATGTTGGTGATGACCAGGACCATCCGTGTTTTGTTGGTGTTGGTTGTA TTGTCTTTGTGTAATAGGAGTATGTATCATACATGAAGGCTGTGGGTGTG TTGCTGTTGTGACTATTGCTGTCGTGCCTGGCTCGTTTGTGTAAGTAACG ATGAGTACCCTCTCTACACAGCGCGCCACGCGACACAACACAACACAACC GCACGGCACACCTATACCACACTAGCACAAGACAACACGCACACACAGCG CATCAACCACACCACACACCACAGCACAACACGCCAGCCCACATCGCGCC CCTCAATAGATACATACATACATACATACATGTCTGCGAAACTCAATCGC AGGGTTGACCTCGAGACCGGAACGGTGACGGTGCTGGGGTCTCACGAGAA GCCCGTGAGGTGCGTCGAGTACAACACCAGCACGGGGACGCTGCTGAGCG GGGGCTGGGACGCGAAGCTCAACTCCTGGGACCCCAGGTTGAAGCAGCCG CTGGTGCAGTCGAGGCCTGCGCCGGGGAAGGTTCGTGCCTTCCTTTTTTT TTTTTTTTTTTTTTCTCGAGAAAGCGCCAGCCTATGTTGTTTTGTGGGTT TGGGTGTTTGGTTGTTTGTATCTCCAACCGCGGATTCGTTTGGNNNNNNN NNNGGGGGCCCCCGCGCCCCACCCGGCGGGGGGGGGGGGGGGGGGGGGGG GGGGGAAGGTTCGTGCCTCCCTTTTTTTTTTTTTTTTGTAATTCACGATA CATCGCCAGCCTCTGCTGTCCTGTATGTATGTATGTATGTATGTATGTAT GCACATACGCGTGTGCTTTGGGTGTGCGTGCGTTTTGGGGCTGCATCCTG TGTTTTCATTTGATTGGCCGGCCAGTAGATGCTCCGTGCGCTGCCCGCGT GTCCTCGCCGACCGATGATTGATTTATTTTGCTGCTGCTTCTGCTGCTGC TGTTGTTGCTGATGTTGTTGCTGTTGGGGGTGGTGGTGGTGGTGCCGCTG GCCGGCTCGATACAAGATGTATATACGTCTCCTTGGGTTGATGCTGATGT TTCCATGGCGTCGTCGGGTGTCGGAAGGCGGGTATGTGTACCAGGCGCCG ACAGAAATGCCAATAAAACACACCAGACTGTGTCCCTCTCTCGCCCTCCC TCTCTCTCTCTCTCTCTCTCTCTCTCGCGCACACACACACACACACACGC ACACATACACCTTCTGAGAAAAAATTGGAGAATGTAGAGGTCGTTTCTTT TCTCCTGGCCAAACACGCCCCCGCGGGCGTTATCTCTGCTGGGGTCCCAT CAAGTGCCCGCAAAAAGTCTGCATCATACATAGACTACTCCCGAAAACCA TTGGAACACTTTTTTTTTGTTCACATATTTACCCTTATTATTTTCCGTTG GCGCTACCAAACGTTCCGCTGGCCGCGCCACCCCGCCGCCGCCACCACCG CCGCCATCGCCATCGCCGCCACCACGGCCGGCCTTCAGGTGTTCACGATG TCGGTGTCGGACCGGCGGGCTGTGATCGGCACCTCGAACCGGCACATCTG GGTGTACGACATGCGGAGCCTGGCGGAGCCGGAGCAGCGGCGCGTGAGCA GCCTCAAGTTCCAGACGCGCTGCGTGAGGGTCTTCCCCGACCAGGAGGGG TACGCCGTGGGGTCCGTGGAGGGGAGGGTGGCGGTCGAGTACTTCGACAC TTCCAAGGTGCGGTGCGGGGGAGTGGGGGGTGGAGTGAAATGGAATGGGA TGGGGTGGGGTGGGATGGAATGGATTGGGATTTGGAAATGGGATGGAAGG GGAATGGAGTGGGATTTGGAAGTATAGGGATCGGGAAAGGGGATCGGGGT TATGGGTCAGGGTGCGATTACGGAGCCCCCGTCTCTATTTCCTAGTTATT AAGTTCAGTTCTTCGCGAAGGCGATCCTGACTGGTGTTGCGGACGTCGTG TTTGGTTTGGGCTTATCATTGTTGCTTTTGCCGTGTGCGTGGTTGGGGGG TTATCTATGTCGTGGTAGCTGCGGCTTCTTGCTGTATTGTCCTCTGCCGT TGTTTGCTGCCGGGTGGTACTTGTTGATGTTGTTTTTGCTGCTGCTGTTG TTGTTGCTGCTGTCGTTGTCGTTGTTTGCTGTCGGCGGTAATTGTTAATT GTGTTGCTGTTGCTGCTGCTGTTGTTGTTGGTATTGTTGTTGCCGTTGTT TGCTCTGGCACTGCTGTTGATTTATGGCATACATACGTAGTTTTAAAATA AAACAAAGAATCAAAGATGGAACCTAACCCATACTAGAGCAGAGACTCGA TATGGGGTTCAAACGGTATTCCATACAGAGACGTAATATTTGGCGAAGCG AGCAGAAAAAACAACCTAAATATCAGAAGAATTCAACATCTCCCCTGCAG AGAATTAGATGTGCGAGGTCGGCCAACTATTTTTCAGCGGGTAGAGCCCA CCGTGTTGCCGTAATGTTGTCATCTACTTCAAAATAGGAACACATCGCAT TATTACGTAGTTTTAGCAATTGATTTCTGGCCGATTGGCTCGATGCTCGC CACCAACTATATCACGCTATTTACTGTTGTGTAAAAAACAAGCTCTCAGG TGACTTTGGTTAACTCTGCCGCCAGAGTCATGCGCGGTATATAACACTTC GATTCTCTGTGCTGCAATTTAACGGCGGTAAGTCTTCGTCCTCCTAAAAC CTCGGCTGACTGAAAACGGCCTTTTTTTTATGGCGTGGCCCTCGTGCGAA TGAATCTCCACCTTCTTTTTTCCCCCAGGAGTCCCAAGACAACAAGTACG CCTTCAAGTGCCACCGCAAGGGCGACAAGGTGTTCCCCGTGAACGCGATG GCGTTCCACCCGGTCTACGGCACCTTCGCCACGGGGGGCTGCGACAACGT GAGTTGTTGGTGCTGTCGTCGTCGTCCTTCATGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1461:300..3483-

>mRNA_L-elsbetiae_contig1461.3366.1 ID=mRNA_L-elsbetiae_contig1461.3366.1|Name=mRNA_L-elsbetiae_contig1461.3366.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1374bp|location=Sequence derived from alignment at L-elsbetiae_contig1461:300..3483- (Laminarionema elsbetiae ELsaHSoW15)
ACGCTGAGGCTGTACGACGCGCGGCAGAACGTGCCGAAGCGAGTGGTACT
GTGCAAGATGGCGCAGCTGGACTGCTGCTTCAAGGACAGCGCGGCGACGG
GCTTCTGCGGCGGCCTGGACAAACAAGTCCAGCAACGCTGAGGCTGTACG
ACGCGCGGCAGAACGTGCCGAAGCGAGTGGTACTGTGCAAGATGGCGCAG
CTGGACTGCTGCTTCAAGGACAGCGCGGCGACGGGCTTCTGCGGCGGCCT
GGACAAACAAGTCCAGCAGGTTGACCTCGAGACCGGAACGGTGACGGTGC
TGGGGTCTCACGAGAAGCCCGTGAGGTGCGTCGAGTACAACACCAGCACG
GGGACGCTGCTGAGCGGGGGCTGGGACGCGAAGCTCAACTCCTGGGACCC
CAGGTTGAAGCAGCCGCTGGTGCAGTCGAGGCCTGCGCCGGGGAAGGGTT
GACCTCGAGACCGGAACGGTGACGGTGCTGGGGTCTCACGAGAAGCCCGT
GAGGTGCGTCGAGTACAACACCAGCACGGGGACGCTGCTGAGCGGGGGCT
GGGACGCGAAGCTCAACTCCTGGGACCCCAGGTTGAAGCAGCCGCTGGTG
CAGTCGAGGCCTGCGCCGGGGAAGGTGTTCACGATGTCGGTGTCGGACCG
GCGGGCTGTGATCGGCACCTCGAACCGGCACATCTGGGTGTACGACATGC
GGAGCCTGGCGGAGCCGGAGCAGCGGCGCGTGAGCAGCCTCAAGTTCCAG
ACGCGCTGCGTGAGGGTCTTCCCCGACCAGGAGGGGTACGCCGTGGGGTC
CGTGGAGGGGAGGGTGGCGGTCGAGTACTTCGACACTTCCAAGGTGTTCA
CGATGTCGGTGTCGGACCGGCGGGCTGTGATCGGCACCTCGAACCGGCAC
ATCTGGGTGTACGACATGCGGAGCCTGGCGGAGCCGGAGCAGCGGCGCGT
GAGCAGCCTCAAGTTCCAGACGCGCTGCGTGAGGGTCTTCCCCGACCAGG
AGGGGTACGCCGTGGGGTCCGTGGAGGGGAGGGTGGCGGTCGAGTACTTC
GACACTTCCAAGGAGTCCCAAGACAACAAGTACGCCTTCAAGTGCCACCG
CAAGGGCGACAAGGTGTTCCCCGTGAACGCGATGGCGTTCCACCCGGTCT
ACGGCACCTTCGCCACGGGGGGCTGCGACAACGTGAGTTGTTGGTGCTGT
CGTCGTCGTCCTTCATGAGAGTCCCAAGACAACAAGTACGCCTTCAAGTG
CCACCGCAAGGGCGACAAGGTGTTCCCCGTGAACGCGATGGCGTTCCACC
CGGTCTACGGCACCTTCGCCACGGGGGGCTGCGACAACGTGAGTTGTTGG
TGCTGTCGTCGTCGTCCTTCATGA
back to top