mRNA_L-elsbetiae_contig1443.3272.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1443.3272.1 vs. uniprot
Match: D7FXH6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH6_ECTSI) HSP 1 Score: 170 bits (430), Expect = 1.140e-41 Identity = 116/258 (44.96%), Postives = 149/258 (57.75%), Query Frame = 1 Query: 598 MILPTGKQ-FVALDAAADQGHRETVRELLALGVDACGGPRRGVVGLCLAAQKEDVGMIAILREGGVVDTGKALCDATNQGREASVKFLLRLDWGVPARRYVNVRN-DLGFTPLWIAVGSGTPRIVRMLLDAGADVKKTCRNTNLWQFEGSRVTPLGFVMDSIRQRNYRGGFATEEQVERMQAVRRLLLRVDAVRALSWLWRRSDNASGTARSAEEEVMDGDYPGRSAAAAAAALKVPIVRD-RKRAATAAFFRYSNKP 1362 ++ PTG VALD AA GH ETVRELL LG+ CGGP RG L LAA + + ++ L + GVVDTG AL + +G EA VKFLL+ W P YVN R+ + FTPL+IA+ +PR+VRMLLDAGADV TC G +PL +IR + + ATEEQ+ +QA+RRLLLRV+A+ A SWLW N A +A E ++G G+S A + + R +R A RYSNKP Sbjct: 231 VVRPTGTTGVVALDVAAQNGHEETVRELLRLGIGLCGGPTRGNDALRLAAWVQHMSIMTALTDAGVVDTGTALFNVAAKGLEAPVKFLLQQKWNTPGGAYVNTRSRNAKFTPLFIAIEGASPRVVRMLLDAGADVTSTCSLPG-----GISRSPLSQCESNIRSKFCQALPATEEQLNGLQAIRRLLLRVEAIYASSWLW--CSNIPCIAPAARE--VEGAC-GKSRIPRKARMLISWRRTGARRVLMPASLRYSNKP 478
BLAST of mRNA_L-elsbetiae_contig1443.3272.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.920e-39 Identity = 103/217 (47.47%), Postives = 123/217 (56.68%), Query Frame = 1 Query: 607 PTGKQFVALDAAADQGHRETVRELL-ALGVDACGGPRRGVVGLCLAAQKEDVGMIAILREGGVVDTGKALCDATNQGREASVKFLLRLDWGVPARRYVNVRNDLGFTPLWIAV---GSGTPRIVRMLLDAGADVKKTCRNTNLWQFEGSRVTPLGFVMDSIRQRNYRGGFATEEQVERMQAVRRLLLRVDAVRALSWLWRRSDNASGTARSAEEEVM 1245 P+G FV LD A GH E VREL LGV CGG GV L LA ++DV ++ IL GGVVDTG+AL A RE SVKFLL+ G A N + G TPL + GS +PRI R L+DA AD K T T Q+ SR TPLGF S+RQ ATEEQ+ ++A+ RLL +VDAV A+SWLWR SD + A A M Sbjct: 166 PSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRM 382
BLAST of mRNA_L-elsbetiae_contig1443.3272.1 vs. uniprot
Match: D8LPY4_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPY4_ECTSI) HSP 1 Score: 158 bits (400), Expect = 3.080e-38 Identity = 104/263 (39.54%), Postives = 140/263 (53.23%), Query Frame = 1 Query: 589 AYPMILPTGKQFVALDAAADQGHRETVRELLAL-GVDACGGPRRGVVGLCLAAQKEDVGMIAILREGGVVDTGKALCDATNQGREASVKFLLRLDWGVPARRYVNVRNDLGFTPLWIAVGSGTPRIVRMLLDAGADVKKTCRNTNLWQFEGSRVTPLGFVMDSIRQRNYRGGFATEEQVERMQAVRRLLLRVDAVRALSWLWRRSDNASGTARSAEEEVMDGDYPGRSAAAAAAALKVPIVRDRKRA-----ATAAFFRYSNK 1359 A P P G VALD AA +GH E VREL+ G+ C G G + L LA + + V + +L GVVDTG +L A GRE +VK LL+ W P RY++ RN+ TPL++AV + PRIVR+LLDAGA+ K T + + + T LG +++R + G AT E+ R++ RRLL+RV+AVRA+SWLW + A + G + A A+ L V I R RA A FRYS K Sbjct: 162 AIPRFQPDGSTRVALDVAAQKGHSEVVRELIQYRGIKTCAGVTGGAIALNLATKHQHVDTMRLLLAAGVVDTGMSLFTAATLGRERAVKLLLQQKWATPGDRYIDSRNECHCTPLFVAVSAAAPRIVRLLLDAGANEKLTRPVSYSFHGKMKNETLLGLADNNLRYEVHDGRRATSEETNRLEESRRLLMRVEAVRAVSWLWGTTSPAYA--------IPLGTDGNKDAKGGASRLGVRIARRETRAHRNGALLATLFRYSVK 416
BLAST of mRNA_L-elsbetiae_contig1443.3272.1 vs. uniprot
Match: D7FNJ3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ3_ECTSI) HSP 1 Score: 152 bits (385), Expect = 8.540e-36 Identity = 89/189 (47.09%), Postives = 118/189 (62.43%), Query Frame = 1 Query: 631 LDAAADQGHRETVRELLALGVDACGGPRRGVVGLCLAAQKEDVGMIAILREGGVVDTGKALCDATNQGREASVKFLLRLDWGVPARRYVNVRNDLGFTPLWIAVGSGTPRIVRMLLDAGADVKKTCRNTNLWQFEGSRV--TPLGFVMDSIRQRNYRGGFATEEQVERMQAVRRLLLRVDAVRALSWLW 1191 LDAA+++GH VRELL LG+ ACGGP RG L +AAQ VG++ +LR+ GVVD GKA+ A GREASV+FLL+ + Y N R++ G T + A PRI R LLDAGAD T +++ R T L V+ S+ + YR AT++Q+ R+QA RRLLL++DAVRA+SW W Sbjct: 216 LDAASERGHESVVRELLNLGLKACGGPSRGRDALFMAAQDNRVGVLTMLRDAGVVDRGKAIVAAAGFGREASVRFLLKQERATTRIDYANTRDEAGRTLFYRAAWGAYPRIGRWLLDAGADETLTSVVQPFLRYDNMRFEDTALKLVLRSLSSKQYRFEPATDDQMLRLQAFRRLLLQIDAVRAISWPW 404
BLAST of mRNA_L-elsbetiae_contig1443.3272.1 vs. uniprot
Match: D8LPY3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY3_ECTSI) HSP 1 Score: 148 bits (373), Expect = 5.490e-35 Identity = 103/262 (39.31%), Postives = 140/262 (53.44%), Query Frame = 1 Query: 589 AYPMILPTGKQFVALDAAADQGHRETVRELLA-LGVDACGGPRRGVVGLCLAAQKEDVGMIAILREGGVVDTGKALCDATNQGREASVKFLLRLDWGVPARRYVNVRNDLGFTPLWIAVGSGTPRIVRMLLDAGADVKKTCRNTNLWQFEGSRVTPLGFVMDSIRQRNYRGGFATEEQVERMQAVRRLLLRVDAVRALSWLWRRSDNASGTARSAEEEVMDGDYPGRSAAAAAAALKVPIVRDRKRA----ATAAFFRYSNK 1359 A+P G VALD AA +G E VREL+ G+ AC G GV L LAA+ + V + +L GVVDTG +L A + GR+ +VK LL+ W P YV+ RND TPL++AV + P++VR+LLDAGA+ + T + ++ T L ++ ++G ATEE++ R++ VRRLLLRV+ VRA+SWLW GT + G R A A+ L V I R RA A RYS K Sbjct: 129 AFPRRQSDGSTRVALDVAAQKGFTEVVRELIQHRGIKACVGQDAGVTALDLAAKHQRVDAMRLLLAAGVVDTGDSLFTAADCGRDKAVKLLLQQKWATPGAGYVDSRNDYQCTPLFVAVAAAAPKVVRLLLDAGANERLTRPVSYSFRGPLENETLLELANRNLGCEMHKGQCATEEEMNRLEEVRRLLLRVETVRAISWLW-------GTTSPVYAAPL-GTGTNRGARGGASGLGVYIARRETRAHCGSLLATMLRYSGK 382
BLAST of mRNA_L-elsbetiae_contig1443.3272.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 147 bits (372), Expect = 2.210e-34 Identity = 94/202 (46.53%), Postives = 116/202 (57.43%), Query Frame = 1 Query: 652 GHRETVRELLA-LGVDACGGPRRGVVGLCLAAQKEDVGMIAILREGGVVDTGKALCDATNQGREASVKFLLRLDWGVPARRYVNVRNDLGFTPLWIAV---GSGTPRIVRMLLDAGADVKKTCRNTNLWQFEGSRVTPLGFVMDSIRQRNYRGGFATEEQVERMQAVRRLLLRVDAVRALSWLWRRSDNASGTARSAEEEVM 1245 GH E VREL+ LGV CGG GV L LAA ++ V ++ IL GGVVDTG+AL A RE SVKFLL+ G N + G TPL + GS +PRI R L+D GAD K T T ++ SR TPLGF S+RQ G ATEEQ+ ++A+ RLL +++AV A+SWLWR SD G A A M Sbjct: 191 GHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRM 392
BLAST of mRNA_L-elsbetiae_contig1443.3272.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 146 bits (368), Expect = 6.820e-34 Identity = 103/263 (39.16%), Postives = 146/263 (55.51%), Query Frame = 1 Query: 607 PTGKQFVALDAAADQGHRETVRELLA-LGVDACGGPRRGVVGLCLAAQKEDVGMIAILREGGVVDTGKALCDATNQGREASVKFLL---RLDWGVPARRYVNVRNDLGFTPLWIAVGSGTPRIVRMLLDAGADVKKTCRNTNLWQFEGSRVTPLGFVMDSIRQRN--YRGGFATEEQVERMQAVRRLLLRVDAVRALSWLWRRSDNASGTARSAEEEVMDGDYPGRSAAAAAAALKVPIVRDRKRAA-----TAAFFRYSNKP 1362 P+G+ F+ LDAAA+ GH E V EL+ +G+D CGG GV L AAQ +++ ++ IL GVVDTG AL A G E +KFLL R + YVN R+ G TPL + PR+VR+L++AGAD N + +TPLG M+ +R + G A+ EQ+ +++A+RRLLLRV+AV A+SWLW SD ++ T +A A + A+ +P++ R+RA AA RYS+KP Sbjct: 182 PSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLW-PSDISTITRAAARGTDRT--------TAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435
BLAST of mRNA_L-elsbetiae_contig1443.3272.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 137 bits (344), Expect = 3.350e-30 Identity = 151/464 (32.54%), Postives = 196/464 (42.24%), Query Frame = 1 Query: 19 LHTAALEDNAELAEALLLSAAARVDTRSDDGGTPLMVAAQGGHERVARALLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLECACFQDAKRPLHKAXXXXXXXXXXXXXXXXXXXXXRTVVGETPLLXXXXXXXXXXXXXXXXXXXXXAYPMIL----PTGKQFVALDAAADQGHRETVRELLA-LGVDACGGPRRGVVGLCLAAQKEDVGMIAILREGGVVDTGKALCDATNQGREASVKFLLRL-----DWGVPARRYVNVRNDLGFTPLWIAVG---SGTPRIVRMLLDAGADVKKTCRNTNLWQFEGSRVTPLGFVMDSIRQRNYRGGF-ATEEQVERMQAVRRLLLRVDAVRALSWLWRRSDNASGTARSAEEEVMDGDYPGRSAAAAAAALKVPIVRDRKR---AATAAFFRYSNK 1359 LH A L +AEL +A+L +D R+ G TPLM+A GH R+A+ L+ L+ + PLH+A XXXXXXXXXXXXX + G T L A P+++ P V LD AA GH + VREL+ LG++ C G L AA + + ++AIL E GVVDTGKAL A G EASVKFLLR GV Y+N R+ G+TPL + S PRIVRML+DAGAD + NL TPL F +R++ G AT+E ++R++A+ RLLLRVDAV A+SWLW G A + E P A L +PI++ R + A RYS K Sbjct: 109 LHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGAD--------------------------------LDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTAL---HIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGA-YLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPP---LP-------ALKLMLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_L-elsbetiae_contig1443.3272.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE) HSP 1 Score: 132 bits (333), Expect = 2.590e-28 Identity = 106/296 (35.81%), Postives = 149/296 (50.34%), Query Frame = 1 Query: 613 GKQFVALDAAADQGHRETVRELLA-LGVDACGGPRRGVVGLCLAAQKEDVGMIAILREGGVVDTGKALCDATNQGREASVKFLLR------LDWGVPARRYVNVRNDLGFTPLWIAVG----SGTPRIVRMLLDAGADVKKTCRNTNLWQFEGSRVTPLGFVMDSIRQRNYRGGFATEEQVERMQAVRRLLLRVDAVRALSWLWRRSDNASGTARSAEEEVMDGDYPGRSAAAAAAALKVPIVRDRK----RAATAAFFRYSNKP*PGSQPVSAQDKGGR-VSCPF--FQKLKAGP 1446 G+ + LDAA H VR+L+ LG+ CGG G A Q + ++ +L + G +DTG+ L DA G EA VK LL+ +DW YVN + G TP+ +G SG+PR++R+ LDAGAD T R TN + R TPL + +R + RG +T+ + ++AVRR+LL+++A+RA+SW W +SD S S E V DG +S L + + R RK R A RYS KP S+ Q +G R +S P F KA P Sbjct: 344 GRIILPLDAAVISKHAAVVRKLIQQLGIQGCGGASAGADASRWAVQTQQYDIVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQRGKHMDWDT----YVNKKQPDGRTPVVCRIGRALRSGSPRVLRLFLDAGADTASTVRITNKEGVQLFRGTPLAYTTWLLRDQQARGIDSTKGEPCSLEAVRRMLLQLEAIRAVSWCW-QSDALS----SIERAVQDGRPRAKSRLTVDTPLGLTLPRRRKARARRVLVMAMSRYSRKP-MSSREYKKQPRGVRSISSPVQEFPADKAPP 629
BLAST of mRNA_L-elsbetiae_contig1443.3272.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI) HSP 1 Score: 122 bits (307), Expect = 1.300e-25 Identity = 103/283 (36.40%), Postives = 137/283 (48.41%), Query Frame = 1 Query: 601 ILPT--GKQFVALDAAADQGHRETVRELLA-LGVDACGGPRRGVVGLCLAAQKEDVGMIAILREGGVVDTGKALCDATNQGREASVKFLLRLDWG---VPARRYVNVRNDLGFTPLW--IAVGSGTPRIVRMLLDAGADVKKTCRNTNLWQFEGSRVTPLGFVMDSIRQRNYRGGFATEEQVERMQAVRRLLLRVDAVRALSWLWRRSDNASGTARSAEEEVMDGDYPGRSAAAAAAALKVPIVRDRK-----RAATAAFFRYSNKP*PGSQPVSAQDKGGRV 1410 +LP+ G F+ LD A VRELL LG++ CGG RGV LCLA VG++A+L GVVD G AL A QG EASVKFLLR G YVN N G TPL I G + RIVR+L+DAGAD R T + T L + + ++ +G T E+ +QA RLLL+V+A A+SW+W ++ D P R A A +++ + R+ RA A RYS K + +Q GG++ Sbjct: 179 VLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHSASRSAYVNKLNRFGLTPLLENITCGHCSARIVRLLVDAGADTTAAYRLTGKKGQAMAATTHLTAMGCLLLEKKAKGD--TGEEPHNLQATFRLLLQVEAAHAISWVWPTGSHSV-------------DRPPRRQRRAEAPVRLTLPMTRRDTGTRRALLGAVSRYSEK------SMYSQGGGGKL 440 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1443.3272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1443.3272.1 >prot_L-elsbetiae_contig1443.3272.1 ID=prot_L-elsbetiae_contig1443.3272.1|Name=mRNA_L-elsbetiae_contig1443.3272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=454bp MPWGDLHTAALEDNAELAEALLLSAAARVDTRSDDGGTPLMVAAQGGHERback to top mRNA from alignment at L-elsbetiae_contig1443:15762..19333- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1443.3272.1 ID=mRNA_L-elsbetiae_contig1443.3272.1|Name=mRNA_L-elsbetiae_contig1443.3272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3572bp|location=Sequence derived from alignment at L-elsbetiae_contig1443:15762..19333- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1443:15762..19333- >mRNA_L-elsbetiae_contig1443.3272.1 ID=mRNA_L-elsbetiae_contig1443.3272.1|Name=mRNA_L-elsbetiae_contig1443.3272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2724bp|location=Sequence derived from alignment at L-elsbetiae_contig1443:15762..19333- (Laminarionema elsbetiae ELsaHSoW15)back to top |