mRNA_L-elsbetiae_contig1441.3260.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: D7FPE5_ECTSI (SET and MYND domain containing 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE5_ECTSI) HSP 1 Score: 449 bits (1155), Expect = 2.860e-148 Identity = 254/474 (53.59%), Postives = 317/474 (66.88%), Query Frame = 2 Query: 329 DPTPYARRAAKLDRRVEFRRHPKHGRGLFALRDIPEGTEVMRVPAAAAVLSGREAEGSCAGCFLPIKAMGRLDPCRGCPLRFCARCKKDGLKANGAGGGAG-HNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESDDNEARAMSLPPSELQKCARLLKSLVGIDVSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAK-TVSQRHGLLEGWGFRCACKRCQREAEEDIRLETHPTPVDACGLGMVRLLEQIIQHTQRNAAPP-KEEECVRHFEEIAQFLAMKENLGLSPLLASRIAIYLREAIMLVGAPHPLLEFSACGHAADAFSKIGSPLEISARMGEYTSSTKLDRCEGLSESQR-ERLQYPKAVGIEALRNAARLHELFYG 1738 DPT YARR A LD RVE R PK GRGLFALRDIP GTEVMRVPAAAAVL R +GSC+GC LP +G L+ C G PL FCA CKK A GG +G HN TCELTKE +CAT SG D+ LRL AD+ VRR+AG+ D EW L+ SLES DNEA MSL P+EL KC RL K+LV ++S ED+Q +YRR+TRN HTV+PN + GSV GLFPCGALVNHSCLPN+ FHCV SSS +G PV++QVLR+ R++RAGDELCYSY+S+ A TVS+R LL GWGFRCAC RC EAEE+ RL TP+D L M+ L QI QR AP +EE + + IA+F + ++ LSP+L R+A+ + E L+GA + F CG AAD S++ + + I+ R +Y +TK++ C+ L E+Q ++L+ +AVG A +A RLHEL+YG Sbjct: 23 DPTRYARRTANLDARVEVRFDPKRGRGLFALRDIPAGTEVMRVPAAAAVLLDRSRKGSCSGCLLPTDTVGSLEACHGFPLSFCAACKK----ATTVGGVSGVHNSATCELTKELNTICAT----SGGIDKDSLRLAADVFVRRKAGLFDDSEWGLLNSLESHDNEAHTMSLAPAELHKCTRLFKTLVDTNISDEDVQAMYRRITRNAHTVSPNTSKPG--FGSVQGLFPCGALVNHSCLPNTFFHCVTE-SSSPEGRPVVKQVLRSIRNIRAGDELCYSYLSSGSAVGTVSERRDLLMGWGFRCACARCLSEAEEEKRLRRQRTPIDERALKMLERLAQISALGQRENAPALREEAYMPDLQLIAEFYSREKGKLLSPMLQYRVAVLMMEVTALIGATNLFFRFMVCGFAADELSELRNAMAITCRQQQYMFATKVEVCD-LGETQATKKLEGIRAVGKFARNDARRLHELYYG 484
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: A0A7S1AGI2_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AGI2_NOCSC) HSP 1 Score: 85.9 bits (211), Expect = 3.650e-14 Identity = 106/383 (27.68%), Postives = 152/383 (39.69%), Query Frame = 2 Query: 386 RHPKHGRGLFALRDIPEGTEVMRVPAAAAVLSGREAEGSCAGCFLPIKAMGRLDPCRGCPLRFCARCKKDGLKANGAGGGAGHNGGTC---------ELTKEFLGMCATTPEGSGPPDEGVLRLVADLL-VRRRAG------------------------VISDEEWDLVKSLESDDNEA------RAMSLPPSELQKCARLLKSLVGID-VSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVA-------GLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHG-LLEGWGFRCACKRCQREAEEDIRLETHPTPVD-ACGLGMVRLLEQIIQHTQRNAAPPKEE 1384 RH GR A R++ G V+R AA L R+ C+ CF P + PC C FC+ C K + G C T+ LG+ + + G+ LRL LL VR R VI D W+ V+ L + +EA R EL+ ++ L G S +D+ L R++ N T+AP A A S + GL+P GA++NHSC P SC V + G ++E T R VR G+EL +Y+ V+ TV+QR LL +GF C C C+ E+ +++ P + +C R QR PP+ E Sbjct: 11 RHNAAGRCYLATRNVSAGETVLRCAPIAAALHDRDVPKRCSRCFAPTDGV----PCT-CHAIFCSTCAKSSDAKR-------EHRGECMAVKLALSDRKTRNALGLKSKSSTGTATT---FLRLAVRLLSVRARHSRSKPVLLLGDPDGDGEWIPSADEDVIHDS-WEDVEELSPETDEALEALLARLQKGRVEELEGGVNAVRLLSGSRRASWDDVFRLLCRISMNAMTLAPEAQVRRALTSSKSRWKDFGIGLYPSGAMLNHSCFP-SCLWFVRS------GTLIVE----TLRVVRRGEELTIAYLP--VSGTVTQRRRRLLHAFGFHCVCSHCEAESNLQKKVQRRPASSEGSCRTPSKR------SRAQRERPPPRME 358
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: A0A7S1HKR9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HKR9_HEMAN) HSP 1 Score: 76.3 bits (186), Expect = 3.360e-11 Identity = 90/307 (29.32%), Postives = 124/307 (40.39%), Query Frame = 2 Query: 401 GRGLFALRDIPEGTEVMRVPAAAAVLS-GREAEGSCAGCFLPIKAMGRLDPCRGCPL-RFC-ARCKKDGLKANGAGGGAGHNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKS----LESDDNEARAMSLPPSELQKCAR-------------LLKSLVGIDVSH----EDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRC 1249 G L A R G V+ P A VL GRE E C CF L C C R+C A C+K+ K+ H+ C ++K C+ P P +LR+ L+ G DE +++ L N + S P Q L K +D S + L+ L R N ++ + +GS G++P GA++NHSC PN CV P QV+R +VR GDELC+SYI A A T + L +GF+CAC+RC Sbjct: 28 GTHLVANRSFRPGDIVLDSPPFAFVLGEGREGE-RCEQCFERGTDEAPLLVCTACKCARYCGASCQKEAWKS--------HHKLECCISKGIAETCSQMPPHVVPEFRLLLRVA---LLSMSTGTTEDEGSGYLQTFADVLNMPSNTSHMHSADPQRCQGNTEISTVVLSLLLSPLLAKKKKSVDFSRMPGPDQLEGLLERFAYNDFSIWDELLIS---IGS--GVYPLGAILNHSCAPN----CVLYYE-----PRTHRQVIRAISAVREGDELCHSYIDAASA-TPQRLERLSICYGFQCACQRC 307
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: A0A8K0R7R2_9PLEO (Uncharacterized protein n=1 Tax=Paraphoma chrysanthemicola TaxID=798071 RepID=A0A8K0R7R2_9PLEO) HSP 1 Score: 71.6 bits (174), Expect = 2.550e-9 Identity = 82/306 (26.80%), Postives = 130/306 (42.48%), Query Frame = 2 Query: 401 GRGLFALRDIPEGTEV--MRVPAAAAVLSGREAEGSCAGCF-----------LPIKAMGRLDPCRGCP-LRFCAR-CKKDGLKANGAGGGAGHNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESD-DNEARAMSLPPSELQKCARLLKSLVGIDVSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRCQREAEED 1270 GRG FA RD G E+ ++ P + L + E +CA C+ L + ++ C GC R+C++ C+K+ GH C+ + +G + VL + DLL+RR+ G+ISD++W+ + L + D+ R + EL SL + + + +Y R+ N T+ T + LG + L P +NHSC PN+ +DG V LR + ++ G+E+ SYI A Q L W F+C C +CQ A D Sbjct: 29 GRGFFAGRDFAAGEEITSLQRPLVGS-LDSQYLEDTCANCYVWTEGASTGTRLYVPQGTKVQKCAGCQRFRYCSKACQKEAWNR-------GHKH-ECKSLRHLVGK---------DMPKAVLACM-DLLIRRKHGLISDDDWEKLCELPTHVDDFKRTGAYENIELMAMGAGQFSLTQNMFNKDFVAAMYMRILSNSLTLI---TPSLDPLGLI--LDPTLGKLNHSCDPNAFI--------MMDGASVS---LRVLKPIKKGEEVFISYIDATNPFPRRQAE-LASRWFFKCGCSKCQSGATLD 298
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: A0A8H3PJ72_9LECA (MYND-type zinc finger protein samB n=1 Tax=Alectoria fallacina TaxID=1903189 RepID=A0A8H3PJ72_9LECA) HSP 1 Score: 70.9 bits (172), Expect = 4.030e-9 Identity = 79/304 (25.99%), Postives = 124/304 (40.79%), Query Frame = 2 Query: 392 PKHGRGLFALRDIPEGTEVMRVPAA-AAVLSGREAEGSCAGC--FLPIKAMG------RLDPCRGCPL-RFCAR-CKKDGLKANGAGGGAGHNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESDDNEARAMSLPPSE-------LQKCARLLKSLVGIDVSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRC 1249 P G GLFA IP G E++RV +VL + +C+ C +LP G RL C+GC + ++C + C+ K H K + + T +R+V LL+RR+A + D EW L+S E R+ + + ++ ++ S G Q L R+ N HT+ T+T LG L P AL+NHSC PN+ +T + LR+ ++ A EL SY+ +++++ L + F C C C Sbjct: 14 PDAGTGLFASEAIPPGVEILRVDRPLVSVLDTPHLKDTCSECCLWLPENGYGGDSQSKRLRACQGCMITKYCCKECQTKSWKRT-------HKYECKIFAKLYPHVLPNT-----------VRIVMQLLLRRKAITLPDPEWRAFLDLQSHVEEFRSSQVTNEDGLTTWHTIELMSQAASSYSGSKEPVSFTQTLTARILINTHTLT---TSTLDPLGLC--LSPYSALLNHSCTPNTAIIFSGSTLT-----------LRSLAAIPAKSELSISYVDTT-NPSLTRQSELRSRYFFNCTCSAC 282
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: A0A0A9F117_ARUDO (SET domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9F117_ARUDO) HSP 1 Score: 69.3 bits (168), Expect = 8.730e-9 Identity = 87/303 (28.71%), Postives = 115/303 (37.95%), Query Frame = 2 Query: 392 PKHGRGLFALRDIPEG------TEVMRVPAAAAVLSGREAEGSCAGCF--LPIKAMGRLDPCRGCPLRFCARCKKDGLKANGAGGGAGHNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESDDNEARAMSLPPSELQKCARL-LKSLVGIDVSHEDLQCLYRRVTRNLHTVA-PNATATSAEL--GSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRCQREAE 1264 P GRGL + R++ EG + ++ PA A L C+ CF LP A G PC C R A C + G A H L L + + P E V + LL A + D + SL S P S A L L L+ S + L + N V P S EL ++P +L NH CLPN+C GP + V+R + G E+C SY +A QR LLE +GFRC C RCQ E++ Sbjct: 18 PGRGRGLVSARNVREGEVLLSESPILLYPATLASLPSY-----CSACFRSLPAAAAGASIPCASC--RAAAFCSP-------SCGAASHP----RLLCAALSIAGGAALAAAAPTEAVQEPLLFLL---SAYSLPDPALRAILSLSSAPPXPPGAQDPASLHAAVAALALPHLLPAGFSPDLTAALLAKDRGNSFAVMEPYRPGMSLELLKARAYAVYPRASLFNHDCLPNACHF----DYPDRPGPGNTDIVVRALHDIPEGREVCISYFTANWRYADRQRR-LLEDYGFRCECDRCQVESQ 294
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: A0A482R4M8_9EURY (SET domain-containing protein-lysine N-methyltransferase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A482R4M8_9EURY) HSP 1 Score: 70.1 bits (170), Expect = 9.700e-9 Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 998 AGLFPCGALVNHSCLPNSCFHCVAATSSSV------DGPPVIE---QVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRC 1249 AG+FP GAL+NHSC PN + +T V D PP++ QV RT R+V AG++LC+SY+ + A +RH L + +GF C C C Sbjct: 238 AGVFPAGALLNHSCAPNCVPMYLPSTHPEVVALQAKDMPPLVAPLVQVFRTTRAVSAGEQLCHSYVE-LAATQQQRRHELQDAYGFTCCCTVC 329
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: E3RJF5_PYRTT (MYND-type zinc finger protein samB n=8 Tax=Pyrenophora TaxID=5027 RepID=E3RJF5_PYRTT) HSP 1 Score: 68.6 bits (166), Expect = 2.350e-8 Identity = 85/303 (28.05%), Postives = 126/303 (41.58%), Query Frame = 2 Query: 398 HGRGLFALRDIPEGTEV--MRVPAAAAVLSGRE----------AEGSCAGCFLPIKAMGRLDPCRGCP-LRFCAR-CKKDGLKANGAGGGAGHNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESD-DNEARAMSLPPSELQKCARLLKSLVGIDVSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRCQREA 1261 +G G+FA R G EV + P ++ + R EGS G L + ++D C C R+C++ C+K A GH C++ K G G P + L + +LL RR+ G+ISD++W++V L S D+ R + E+ +L + + +Y RV N T+ T T LG + L P +NHSC PN+ +DGP V +RT R +R E+ SYI Q L W F C C +CQ +A Sbjct: 31 NGNGVFASRRFGAGEEVASFKRPLVGSLETERLLDTCANCYVWTEGSSTGTRLYVPEGVKVDKCAACARFRYCSKACQK-------AAWNRGHKH-ECKVLKPMAGR--------GLP-KAFLACI-ELLTRRKHGLISDQDWEMVCRLPSHVDDFKRNGTYGNIEMMAMGAPQFALPPNMFDRDFIAAMYARVMSNALTII---TPTLDPLGII--LDPTLCSLNHSCDPNAFI--------MMDGPSVS---IRTLRPIRKDKEIFISYIDTTYPYHKRQEE-LQTRWFFTCRCAKCQEKA 298
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: UPI001B3860FE (SET domain-containing protein n=1 Tax=Cucurbitaria berberidis CBS 394.84 TaxID=1168544 RepID=UPI001B3860FE) HSP 1 Score: 68.2 bits (165), Expect = 3.130e-8 Identity = 84/308 (27.27%), Postives = 132/308 (42.86%), Query Frame = 2 Query: 401 GRGLFALRDIPEGTEV--MRVPAAAAVLSGRE----------AEGSCAGCFLPIKAMGRLDPCRGCP-LRFCAR-CKKDGLKANGAGGGAGHNGGT--CELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESD-DNEARAMSLPPSELQKCARLLKSLVGIDVSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEG-WGFRCACKRCQREAEED 1270 GRG+FA D G ++ + P ++ + R EGS G L + + C GC R+C++ C+K+ A H G C+L K G + VL + +LL+RR+ G+ISDE+W+L+ +L+ ++ R + EL SL + + + +Y RV N T+ T T LG + L P +NHSC PNS +DG + +RT + ++ +E+ SYI +R L+ W FRC C +CQ+ A D Sbjct: 32 GRGVFASGDFGAGEQLAAFQRPLVGSLDTERLLDTCANCYIWTEGSSTGTRLYVPEDTNVQKCAGCQRFRYCSKACQKE----------AWHRGHKHECKLLKPMAGK---------DMPKAVLACM-ELLIRRKHGLISDEDWELLCNLQPHVEDFKRNGNYGNMELMAMGASQFSLTQNMFNKDFVAAMYARVLTNSLTLI---TPTLDPLGII--LDPILGHINHSCDPNSFV--------IMDGAEIS---IRTLKPIKRDEEIYISYIDTT--NPYYRRQSELQARWFFRCKCTKCQKGATLD 301
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: UPI001E8DFCA6 (uncharacterized protein n=1 Tax=Alternaria rosae TaxID=1187941 RepID=UPI001E8DFCA6) HSP 1 Score: 67.4 bits (163), Expect = 5.420e-8 Identity = 82/295 (27.80%), Postives = 123/295 (41.69%), Query Frame = 2 Query: 401 GRGLFALRDIPEGTEV--MRVPAAAAVLSGREAEGSCAGCFLPIKAMG---RLDPCRGCPLRFCARCKKDGLKANGAGGGAGHNGGT--CELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESDDNEARAMSLPPS-ELQKCARLLKSLVGIDVSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRCQREA 1261 G G+FA R G E+ + P ++ + R + +CA C+L + RL G + CA C++ + A + G C++ K G P+ +LLVRR+ G+ISDEEW+L+ L S ++ + + EL SL + + +Y RV N T+ T T LG + C +NHSC PN+ +DGP V +RT RS++ E+ SYI A Q L W F C C +CQ +A Sbjct: 32 GNGMFANRRFGAGEEIAAFKRPLVGSLETERLLD-TCANCYLWTEGSSTGTRLYVPEGAKVNKCAACQRFHYCSKACQKDAWNRGHKHECKILKPMAGR--HLPKA--------FLACMELLVRRKHGLISDEEWELLCRLPSHIDDFKCNGTYENIELMAMGAGQFSLSQNLFDKDFVAAMYGRVMSNALTLI---TPTLDPLGIMIDPTLCH--LNHSCDPNAYI--------MMDGPQVS---IRTLRSIKKDKEIYISYIDATNPYHKRQEE-LQSRWFFTCRCAKCQEKA 298 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1441.3260.1 >prot_L-elsbetiae_contig1441.3260.1 ID=prot_L-elsbetiae_contig1441.3260.1|Name=mRNA_L-elsbetiae_contig1441.3260.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=591bp MAAFKEGCVVLYRPTQSLYTVVRWDRDAEVLLLTPAGRPSAVNRTTAAKEback to top mRNA from alignment at L-elsbetiae_contig1441:12309..16006- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1441.3260.1 ID=mRNA_L-elsbetiae_contig1441.3260.1|Name=mRNA_L-elsbetiae_contig1441.3260.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3698bp|location=Sequence derived from alignment at L-elsbetiae_contig1441:12309..16006- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1441:12309..16006- >mRNA_L-elsbetiae_contig1441.3260.1 ID=mRNA_L-elsbetiae_contig1441.3260.1|Name=mRNA_L-elsbetiae_contig1441.3260.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3546bp|location=Sequence derived from alignment at L-elsbetiae_contig1441:12309..16006- (Laminarionema elsbetiae ELsaHSoW15)back to top |