mRNA_L-elsbetiae_contig1441.3260.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1441.3260.1
Unique NamemRNA_L-elsbetiae_contig1441.3260.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: D7FPE5_ECTSI (SET and MYND domain containing 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE5_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 2.860e-148
Identity = 254/474 (53.59%), Postives = 317/474 (66.88%), Query Frame = 2
Query:  329 DPTPYARRAAKLDRRVEFRRHPKHGRGLFALRDIPEGTEVMRVPAAAAVLSGREAEGSCAGCFLPIKAMGRLDPCRGCPLRFCARCKKDGLKANGAGGGAG-HNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESDDNEARAMSLPPSELQKCARLLKSLVGIDVSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAK-TVSQRHGLLEGWGFRCACKRCQREAEEDIRLETHPTPVDACGLGMVRLLEQIIQHTQRNAAPP-KEEECVRHFEEIAQFLAMKENLGLSPLLASRIAIYLREAIMLVGAPHPLLEFSACGHAADAFSKIGSPLEISARMGEYTSSTKLDRCEGLSESQR-ERLQYPKAVGIEALRNAARLHELFYG 1738
            DPT YARR A LD RVE R  PK GRGLFALRDIP GTEVMRVPAAAAVL  R  +GSC+GC LP   +G L+ C G PL FCA CKK    A   GG +G HN  TCELTKE   +CAT    SG  D+  LRL AD+ VRR+AG+  D EW L+ SLES DNEA  MSL P+EL KC RL K+LV  ++S ED+Q +YRR+TRN HTV+PN +      GSV GLFPCGALVNHSCLPN+ FHCV   SSS +G PV++QVLR+ R++RAGDELCYSY+S+  A  TVS+R  LL GWGFRCAC RC  EAEE+ RL    TP+D   L M+  L QI    QR  AP  +EE  +   + IA+F + ++   LSP+L  R+A+ + E   L+GA +    F  CG AAD  S++ + + I+ R  +Y  +TK++ C+ L E+Q  ++L+  +AVG  A  +A RLHEL+YG
Sbjct:   23 DPTRYARRTANLDARVEVRFDPKRGRGLFALRDIPAGTEVMRVPAAAAVLLDRSRKGSCSGCLLPTDTVGSLEACHGFPLSFCAACKK----ATTVGGVSGVHNSATCELTKELNTICAT----SGGIDKDSLRLAADVFVRRKAGLFDDSEWGLLNSLESHDNEAHTMSLAPAELHKCTRLFKTLVDTNISDEDVQAMYRRITRNAHTVSPNTSKPG--FGSVQGLFPCGALVNHSCLPNTFFHCVTE-SSSPEGRPVVKQVLRSIRNIRAGDELCYSYLSSGSAVGTVSERRDLLMGWGFRCACARCLSEAEEEKRLRRQRTPIDERALKMLERLAQISALGQRENAPALREEAYMPDLQLIAEFYSREKGKLLSPMLQYRVAVLMMEVTALIGATNLFFRFMVCGFAADELSELRNAMAITCRQQQYMFATKVEVCD-LGETQATKKLEGIRAVGKFARNDARRLHELYYG 484          
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: A0A7S1AGI2_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AGI2_NOCSC)

HSP 1 Score: 85.9 bits (211), Expect = 3.650e-14
Identity = 106/383 (27.68%), Postives = 152/383 (39.69%), Query Frame = 2
Query:  386 RHPKHGRGLFALRDIPEGTEVMRVPAAAAVLSGREAEGSCAGCFLPIKAMGRLDPCRGCPLRFCARCKKDGLKANGAGGGAGHNGGTC---------ELTKEFLGMCATTPEGSGPPDEGVLRLVADLL-VRRRAG------------------------VISDEEWDLVKSLESDDNEA------RAMSLPPSELQKCARLLKSLVGID-VSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVA-------GLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHG-LLEGWGFRCACKRCQREAEEDIRLETHPTPVD-ACGLGMVRLLEQIIQHTQRNAAPPKEE 1384
            RH   GR   A R++  G  V+R    AA L  R+    C+ CF P   +    PC  C   FC+ C K              + G C           T+  LG+ + +  G+       LRL   LL VR R                          VI D  W+ V+ L  + +EA      R       EL+     ++ L G    S +D+  L  R++ N  T+AP A    A   S +       GL+P GA++NHSC P SC   V +      G  ++E    T R VR G+EL  +Y+   V+ TV+QR   LL  +GF C C  C+ E+    +++  P   + +C     R         QR   PP+ E
Sbjct:   11 RHNAAGRCYLATRNVSAGETVLRCAPIAAALHDRDVPKRCSRCFAPTDGV----PCT-CHAIFCSTCAKSSDAKR-------EHRGECMAVKLALSDRKTRNALGLKSKSSTGTATT---FLRLAVRLLSVRARHSRSKPVLLLGDPDGDGEWIPSADEDVIHDS-WEDVEELSPETDEALEALLARLQKGRVEELEGGVNAVRLLSGSRRASWDDVFRLLCRISMNAMTLAPEAQVRRALTSSKSRWKDFGIGLYPSGAMLNHSCFP-SCLWFVRS------GTLIVE----TLRVVRRGEELTIAYLP--VSGTVTQRRRRLLHAFGFHCVCSHCEAESNLQKKVQRRPASSEGSCRTPSKR------SRAQRERPPPRME 358          
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: A0A7S1HKR9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HKR9_HEMAN)

HSP 1 Score: 76.3 bits (186), Expect = 3.360e-11
Identity = 90/307 (29.32%), Postives = 124/307 (40.39%), Query Frame = 2
Query:  401 GRGLFALRDIPEGTEVMRVPAAAAVLS-GREAEGSCAGCFLPIKAMGRLDPCRGCPL-RFC-ARCKKDGLKANGAGGGAGHNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKS----LESDDNEARAMSLPPSELQKCAR-------------LLKSLVGIDVSH----EDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRC 1249
            G  L A R    G  V+  P  A VL  GRE E  C  CF        L  C  C   R+C A C+K+  K+        H+   C ++K     C+  P    P    +LR+    L+    G   DE    +++    L    N +   S  P   Q                 L K    +D S     + L+ L  R   N  ++      +   +GS  G++P GA++NHSC PN    CV         P    QV+R   +VR GDELC+SYI A  A T  +   L   +GF+CAC+RC
Sbjct:   28 GTHLVANRSFRPGDIVLDSPPFAFVLGEGREGE-RCEQCFERGTDEAPLLVCTACKCARYCGASCQKEAWKS--------HHKLECCISKGIAETCSQMPPHVVPEFRLLLRVA---LLSMSTGTTEDEGSGYLQTFADVLNMPSNTSHMHSADPQRCQGNTEISTVVLSLLLSPLLAKKKKSVDFSRMPGPDQLEGLLERFAYNDFSIWDELLIS---IGS--GVYPLGAILNHSCAPN----CVLYYE-----PRTHRQVIRAISAVREGDELCHSYIDAASA-TPQRLERLSICYGFQCACQRC 307          
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: A0A8K0R7R2_9PLEO (Uncharacterized protein n=1 Tax=Paraphoma chrysanthemicola TaxID=798071 RepID=A0A8K0R7R2_9PLEO)

HSP 1 Score: 71.6 bits (174), Expect = 2.550e-9
Identity = 82/306 (26.80%), Postives = 130/306 (42.48%), Query Frame = 2
Query:  401 GRGLFALRDIPEGTEV--MRVPAAAAVLSGREAEGSCAGCF-----------LPIKAMGRLDPCRGCP-LRFCAR-CKKDGLKANGAGGGAGHNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESD-DNEARAMSLPPSELQKCARLLKSLVGIDVSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRCQREAEED 1270
            GRG FA RD   G E+  ++ P   + L  +  E +CA C+           L +    ++  C GC   R+C++ C+K+           GH    C+  +  +G             + VL  + DLL+RR+ G+ISD++W+ +  L +  D+  R  +    EL        SL     + + +  +Y R+  N  T+    T +   LG +  L P    +NHSC PN+           +DG  V    LR  + ++ G+E+  SYI A       Q   L   W F+C C +CQ  A  D
Sbjct:   29 GRGFFAGRDFAAGEEITSLQRPLVGS-LDSQYLEDTCANCYVWTEGASTGTRLYVPQGTKVQKCAGCQRFRYCSKACQKEAWNR-------GHKH-ECKSLRHLVGK---------DMPKAVLACM-DLLIRRKHGLISDDDWEKLCELPTHVDDFKRTGAYENIELMAMGAGQFSLTQNMFNKDFVAAMYMRILSNSLTLI---TPSLDPLGLI--LDPTLGKLNHSCDPNAFI--------MMDGASVS---LRVLKPIKKGEEVFISYIDATNPFPRRQAE-LASRWFFKCGCSKCQSGATLD 298          
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: A0A8H3PJ72_9LECA (MYND-type zinc finger protein samB n=1 Tax=Alectoria fallacina TaxID=1903189 RepID=A0A8H3PJ72_9LECA)

HSP 1 Score: 70.9 bits (172), Expect = 4.030e-9
Identity = 79/304 (25.99%), Postives = 124/304 (40.79%), Query Frame = 2
Query:  392 PKHGRGLFALRDIPEGTEVMRVPAA-AAVLSGREAEGSCAGC--FLPIKAMG------RLDPCRGCPL-RFCAR-CKKDGLKANGAGGGAGHNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESDDNEARAMSLPPSE-------LQKCARLLKSLVGIDVSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRC 1249
            P  G GLFA   IP G E++RV     +VL     + +C+ C  +LP    G      RL  C+GC + ++C + C+    K         H        K +  +   T           +R+V  LL+RR+A  + D EW     L+S   E R+  +   +       ++  ++   S  G        Q L  R+  N HT+    T+T   LG    L P  AL+NHSC PN+      +T +           LR+  ++ A  EL  SY+      +++++  L   + F C C  C
Sbjct:   14 PDAGTGLFASEAIPPGVEILRVDRPLVSVLDTPHLKDTCSECCLWLPENGYGGDSQSKRLRACQGCMITKYCCKECQTKSWKRT-------HKYECKIFAKLYPHVLPNT-----------VRIVMQLLLRRKAITLPDPEWRAFLDLQSHVEEFRSSQVTNEDGLTTWHTIELMSQAASSYSGSKEPVSFTQTLTARILINTHTLT---TSTLDPLGLC--LSPYSALLNHSCTPNTAIIFSGSTLT-----------LRSLAAIPAKSELSISYVDTT-NPSLTRQSELRSRYFFNCTCSAC 282          
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: A0A0A9F117_ARUDO (SET domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9F117_ARUDO)

HSP 1 Score: 69.3 bits (168), Expect = 8.730e-9
Identity = 87/303 (28.71%), Postives = 115/303 (37.95%), Query Frame = 2
Query:  392 PKHGRGLFALRDIPEG------TEVMRVPAAAAVLSGREAEGSCAGCF--LPIKAMGRLDPCRGCPLRFCARCKKDGLKANGAGGGAGHNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESDDNEARAMSLPPSELQKCARL-LKSLVGIDVSHEDLQCLYRRVTRNLHTVA-PNATATSAEL--GSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRCQREAE 1264
            P  GRGL + R++ EG      + ++  PA  A L        C+ CF  LP  A G   PC  C  R  A C         + G A H      L    L +       +  P E V   +  LL    A  + D     + SL S          P S     A L L  L+    S +    L  +   N   V  P     S EL       ++P  +L NH CLPN+C            GP   + V+R    +  G E+C SY +A       QR  LLE +GFRC C RCQ E++
Sbjct:   18 PGRGRGLVSARNVREGEVLLSESPILLYPATLASLPSY-----CSACFRSLPAAAAGASIPCASC--RAAAFCSP-------SCGAASHP----RLLCAALSIAGGAALAAAAPTEAVQEPLLFLL---SAYSLPDPALRAILSLSSAPPXPPGAQDPASLHAAVAALALPHLLPAGFSPDLTAALLAKDRGNSFAVMEPYRPGMSLELLKARAYAVYPRASLFNHDCLPNACHF----DYPDRPGPGNTDIVVRALHDIPEGREVCISYFTANWRYADRQRR-LLEDYGFRCECDRCQVESQ 294          
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: A0A482R4M8_9EURY (SET domain-containing protein-lysine N-methyltransferase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A482R4M8_9EURY)

HSP 1 Score: 70.1 bits (170), Expect = 9.700e-9
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 2
Query:  998 AGLFPCGALVNHSCLPNSCFHCVAATSSSV------DGPPVIE---QVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRC 1249
            AG+FP GAL+NHSC PN     + +T   V      D PP++    QV RT R+V AG++LC+SY+  + A    +RH L + +GF C C  C
Sbjct:  238 AGVFPAGALLNHSCAPNCVPMYLPSTHPEVVALQAKDMPPLVAPLVQVFRTTRAVSAGEQLCHSYVE-LAATQQQRRHELQDAYGFTCCCTVC 329          
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: E3RJF5_PYRTT (MYND-type zinc finger protein samB n=8 Tax=Pyrenophora TaxID=5027 RepID=E3RJF5_PYRTT)

HSP 1 Score: 68.6 bits (166), Expect = 2.350e-8
Identity = 85/303 (28.05%), Postives = 126/303 (41.58%), Query Frame = 2
Query:  398 HGRGLFALRDIPEGTEV--MRVPAAAAVLSGRE----------AEGSCAGCFLPIKAMGRLDPCRGCP-LRFCAR-CKKDGLKANGAGGGAGHNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESD-DNEARAMSLPPSELQKCARLLKSLVGIDVSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRCQREA 1261
            +G G+FA R    G EV   + P   ++ + R            EGS  G  L +    ++D C  C   R+C++ C+K       A    GH    C++ K   G         G P +  L  + +LL RR+ G+ISD++W++V  L S  D+  R  +    E+        +L       + +  +Y RV  N  T+    T T   LG +  L P    +NHSC PN+           +DGP V    +RT R +R   E+  SYI         Q   L   W F C C +CQ +A
Sbjct:   31 NGNGVFASRRFGAGEEVASFKRPLVGSLETERLLDTCANCYVWTEGSSTGTRLYVPEGVKVDKCAACARFRYCSKACQK-------AAWNRGHKH-ECKVLKPMAGR--------GLP-KAFLACI-ELLTRRKHGLISDQDWEMVCRLPSHVDDFKRNGTYGNIEMMAMGAPQFALPPNMFDRDFIAAMYARVMSNALTII---TPTLDPLGII--LDPTLCSLNHSCDPNAFI--------MMDGPSVS---IRTLRPIRKDKEIFISYIDTTYPYHKRQEE-LQTRWFFTCRCAKCQEKA 298          
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: UPI001B3860FE (SET domain-containing protein n=1 Tax=Cucurbitaria berberidis CBS 394.84 TaxID=1168544 RepID=UPI001B3860FE)

HSP 1 Score: 68.2 bits (165), Expect = 3.130e-8
Identity = 84/308 (27.27%), Postives = 132/308 (42.86%), Query Frame = 2
Query:  401 GRGLFALRDIPEGTEV--MRVPAAAAVLSGRE----------AEGSCAGCFLPIKAMGRLDPCRGCP-LRFCAR-CKKDGLKANGAGGGAGHNGGT--CELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESD-DNEARAMSLPPSELQKCARLLKSLVGIDVSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEG-WGFRCACKRCQREAEED 1270
            GRG+FA  D   G ++   + P   ++ + R            EGS  G  L +     +  C GC   R+C++ C+K+          A H G    C+L K   G             + VL  + +LL+RR+ G+ISDE+W+L+ +L+   ++  R  +    EL        SL     + + +  +Y RV  N  T+    T T   LG +  L P    +NHSC PNS           +DG  +    +RT + ++  +E+  SYI         +R   L+  W FRC C +CQ+ A  D
Sbjct:   32 GRGVFASGDFGAGEQLAAFQRPLVGSLDTERLLDTCANCYIWTEGSSTGTRLYVPEDTNVQKCAGCQRFRYCSKACQKE----------AWHRGHKHECKLLKPMAGK---------DMPKAVLACM-ELLIRRKHGLISDEDWELLCNLQPHVEDFKRNGNYGNMELMAMGASQFSLTQNMFNKDFVAAMYARVLTNSLTLI---TPTLDPLGII--LDPILGHINHSCDPNSFV--------IMDGAEIS---IRTLKPIKRDEEIYISYIDTT--NPYYRRQSELQARWFFRCKCTKCQKGATLD 301          
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Match: UPI001E8DFCA6 (uncharacterized protein n=1 Tax=Alternaria rosae TaxID=1187941 RepID=UPI001E8DFCA6)

HSP 1 Score: 67.4 bits (163), Expect = 5.420e-8
Identity = 82/295 (27.80%), Postives = 123/295 (41.69%), Query Frame = 2
Query:  401 GRGLFALRDIPEGTEV--MRVPAAAAVLSGREAEGSCAGCFLPIKAMG---RLDPCRGCPLRFCARCKKDGLKANGAGGGAGHNGGT--CELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISDEEWDLVKSLESDDNEARAMSLPPS-ELQKCARLLKSLVGIDVSHEDLQCLYRRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAATSSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWGFRCACKRCQREA 1261
            G G+FA R    G E+   + P   ++ + R  + +CA C+L  +      RL    G  +  CA C++    +      A + G    C++ K   G     P+              +LLVRR+ G+ISDEEW+L+  L S  ++ +      + EL        SL       + +  +Y RV  N  T+    T T   LG +     C   +NHSC PN+           +DGP V    +RT RS++   E+  SYI A       Q   L   W F C C +CQ +A
Sbjct:   32 GNGMFANRRFGAGEEIAAFKRPLVGSLETERLLD-TCANCYLWTEGSSTGTRLYVPEGAKVNKCAACQRFHYCSKACQKDAWNRGHKHECKILKPMAGR--HLPKA--------FLACMELLVRRKHGLISDEEWELLCRLPSHIDDFKCNGTYENIELMAMGAGQFSLSQNLFDKDFVAAMYGRVMSNALTLI---TPTLDPLGIMIDPTLCH--LNHSCDPNAYI--------MMDGPQVS---IRTLRSIKKDKEIYISYIDATNPYHKRQEE-LQSRWFFTCRCAKCQEKA 298          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1441.3260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPE5_ECTSI2.860e-14853.59SET and MYND domain containing 1b n=1 Tax=Ectocarp... [more]
A0A7S1AGI2_NOCSC3.650e-1427.68Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S1HKR9_HEMAN3.360e-1129.32Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A8K0R7R2_9PLEO2.550e-926.80Uncharacterized protein n=1 Tax=Paraphoma chrysant... [more]
A0A8H3PJ72_9LECA4.030e-925.99MYND-type zinc finger protein samB n=1 Tax=Alector... [more]
A0A0A9F117_ARUDO8.730e-928.71SET domain-containing protein n=1 Tax=Arundo donax... [more]
A0A482R4M8_9EURY9.700e-941.94SET domain-containing protein-lysine N-methyltrans... [more]
E3RJF5_PYRTT2.350e-828.05MYND-type zinc finger protein samB n=8 Tax=Pyrenop... [more]
UPI001B3860FE3.130e-827.27SET domain-containing protein n=1 Tax=Cucurbitaria... [more]
UPI001E8DFCA65.420e-827.80uncharacterized protein n=1 Tax=Alternaria rosae T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1441contigL-elsbetiae_contig1441:12309..16006 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score152.5
Seed ortholog evalue6.1e-34
Seed eggNOG ortholog2880.D7FPE3
KEGG koko:K11426
Hectar predicted targeting categoryother localisation
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG2084@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-14_004640.1
Exons5
Model size2089
Cds size1773
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815577.24475-UTR-L-elsbetiae_contig1441:12308..125991622815577.24475-UTR-L-elsbetiae_contig1441:12308..12599Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1441 12309..12599 -
1691682969.820199-UTR-L-elsbetiae_contig1441:12308..125991691682969.820199-UTR-L-elsbetiae_contig1441:12308..12599Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1441 12309..12599 -
1622815577.3210433-UTR-L-elsbetiae_contig1441:15981..160061622815577.3210433-UTR-L-elsbetiae_contig1441:15981..16006Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1441 15982..16006 -
1691682969.8834164-UTR-L-elsbetiae_contig1441:15981..160061691682969.8834164-UTR-L-elsbetiae_contig1441:15981..16006Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1441 15982..16006 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815577.2602549-CDS-L-elsbetiae_contig1441:12599..130381622815577.2602549-CDS-L-elsbetiae_contig1441:12599..13038Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1441 12600..13038 -
1691682969.832512-CDS-L-elsbetiae_contig1441:12599..130381691682969.832512-CDS-L-elsbetiae_contig1441:12599..13038Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1441 12600..13038 -
1622815577.2705374-CDS-L-elsbetiae_contig1441:13457..136211622815577.2705374-CDS-L-elsbetiae_contig1441:13457..13621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1441 13458..13621 -
1691682969.8419647-CDS-L-elsbetiae_contig1441:13457..136211691682969.8419647-CDS-L-elsbetiae_contig1441:13457..13621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1441 13458..13621 -
1622815577.2836506-CDS-L-elsbetiae_contig1441:14002..142671622815577.2836506-CDS-L-elsbetiae_contig1441:14002..14267Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1441 14003..14267 -
1691682969.851378-CDS-L-elsbetiae_contig1441:14002..142671691682969.851378-CDS-L-elsbetiae_contig1441:14002..14267Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1441 14003..14267 -
1622815577.2967694-CDS-L-elsbetiae_contig1441:14541..154191622815577.2967694-CDS-L-elsbetiae_contig1441:14541..15419Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1441 14542..15419 -
1691682969.8606975-CDS-L-elsbetiae_contig1441:14541..154191691682969.8606975-CDS-L-elsbetiae_contig1441:14541..15419Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1441 14542..15419 -
1622815577.3093069-CDS-L-elsbetiae_contig1441:15954..159811622815577.3093069-CDS-L-elsbetiae_contig1441:15954..15981Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1441 15955..15981 -
1691682969.8723056-CDS-L-elsbetiae_contig1441:15954..159811691682969.8723056-CDS-L-elsbetiae_contig1441:15954..15981Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1441 15955..15981 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1441.3260.1prot_L-elsbetiae_contig1441.3260.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1441 12600..15981 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1441.3260.1

>prot_L-elsbetiae_contig1441.3260.1 ID=prot_L-elsbetiae_contig1441.3260.1|Name=mRNA_L-elsbetiae_contig1441.3260.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=591bp
MAAFKEGCVVLYRPTQSLYTVVRWDRDAEVLLLTPAGRPSAVNRTTAAKE
RARTRWVFETMVDAVVETTTAPPGGVTTKRATAGDGTAAPTERSGGKASA
SDPTPYARRAAKLDRRVEFRRHPKHGRGLFALRDIPEGTEVMRVPAAAAV
LSGREAEGSCAGCFLPIKAMGRLDPCRGCPLRFCARCKKDGLKANGAGGG
AGHNGGTCELTKEFLGMCATTPEGSGPPDEGVLRLVADLLVRRRAGVISD
EEWDLVKSLESDDNEARAMSLPPSELQKCARLLKSLVGIDVSHEDLQCLY
RRVTRNLHTVAPNATATSAELGSVAGLFPCGALVNHSCLPNSCFHCVAAT
SSSVDGPPVIEQVLRTFRSVRAGDELCYSYISAVVAKTVSQRHGLLEGWG
FRCACKRCQREAEEDIRLETHPTPVDACGLGMVRLLEQIIQHTQRNAAPP
KEEECVRHFEEIAQFLAMKENLGLSPLLASRIAIYLREAIMLVGAPHPLL
EFSACGHAADAFSKIGSPLEISARMGEYTSSTKLDRCEGLSESQRERLQY
PKAVGIEALRNAARLHELFYGEEHELSITLRKRVEAIVRR*
back to top

mRNA from alignment at L-elsbetiae_contig1441:12309..16006-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1441.3260.1 ID=mRNA_L-elsbetiae_contig1441.3260.1|Name=mRNA_L-elsbetiae_contig1441.3260.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3698bp|location=Sequence derived from alignment at L-elsbetiae_contig1441:12309..16006- (Laminarionema elsbetiae ELsaHSoW15)
GTAGGTGTGAGGGCGACGAAACGCGATGGCAGCGTTCAAGGAGGGTTGTG TGGTGAGTGAAAAAATTACGGTGTTACTGCCAGTGGTGTGATTCCTTCTC TCTCCCGCGTTATTATTACGTCTCTGAACTGCGAAGTGCGATACAGCAGT AGTTGGCAACCACGCGCGCGTGTTGCTGCTAGACTACTTTTAGTCTACCT AATGGCACCCCGCTACTCGGTATACCCTCACACGTAGGGCGCGTACCTAC GTGCCAGCGTTTTTACATTAATCCTTAGCGGCCCGAGTGCCCTGTCCCCA TGCATGATGGAGAAAGCTAGATAGATTTACACATGCATGATGCATGTGAG AATCATCCACCAAGCTGCATTTTAAATTCAAAACAAGAGGAACAATTGGA TGCAGGTGTTTACTACCTACTCCGTATGTAGTATGTACATGGCTGTCGAT CTATGCACGTATGTATAGATCTGGCATGTTAACACTGCTCGTGCAAAAGC AGCCGCAGTAGCAGTGACAACGTGCTGACCTCGGCGACAACGGCGGTGGC TGTGAAAATGAACTTATTCCTCACACGCGGGTTTTAGGTTCTCTACCGAC CGACGCAGTCGCTGTACACCGTCGTGCGTTGGGATCGAGATGCGGAGGTC CTCCTGCTCACGCCGGCGGGGCGTCCTTCAGCCGTCAACCGCACGACCGC CGCGAAAGAGCGGGCACGTACGCGATGGGTTTTCGAGACGATGGTCGATG CTGTCGTGGAGACGACCACGGCGCCTCCGGGCGGAGTCACGACCAAGAGA GCTACTGCTGGCGACGGCACTGCGGCGCCGACAGAGCGCAGCGGTGGAAA AGCTTCCGCCTCGGACCCAACCCCGTACGCCCGGCGTGCCGCAAAGCTCG ACAGGCGGGTCGAGTTCCGGCGCCACCCCAAGCATGGCCGTGGCCTCTTC GCTCTTCGTGACATACCGGAGGGCACCGAGGTGATGCGGGTGCCAGCGGC GGCGGCGGTGTTGTCGGGTCGTGAGGCGGAGGGCTCATGTGCTGGGTGTT TTCTTCCAATCAAGGCCATGGGCCGGTTAGACCCCTGCCGCGGCTGCCCG CTCAGGTTCTGCGCCCGATGTAAAAAGGATGGTCTGAAAGCAAACGGTGC CGGCGGCGGCGCCGGTCACAACGGTGGGACGTGCGAGCTCACAAAGGAGT TCCTTGGGATGTGCGCGACGACTCCCGAAGGCAGCGGCCCGCCGGATGAG GGCGTTCTGCGACTCGTGGCCGATCTCTTGGTGAGGCGAAGGGCCGGCGT GATCAGCGACGAAGAGTGGGACCTGGTCAAGAGCCTCGAGAGTGACGACA ACGAGGCCCGTGCGATGAGCCTACCGCCCAGCGAGCTCCAGAAATGCGCG CGATTGCTCAAGTCCCTGGTGGGAATCGACGTTTCGCACGAAGACCTCCA GTGCCTGTACCGCAGGCAAGCTTTTCTAGTGCCAACCCAGTCGATCCGTC AGCGGCATGTTCAGGGCGCTCAATAACGACACGACAATGTAATAGAGCGG TTCATACAACGTCGGTGACAGCAGTTGTTTGATTTGTTCGTCTCCCTTTG CTAGAGGGTACTCGTTTGTAGTACTCTTTGTTTTCAGTCAAAAGAAAAAA AATCTTCGAAACATCAATGTCGGCGCTCTTCTCTTCACTCCCGCTCACCA AACCCACTTCTACGCCCCCGCGACGCAAACCGCCATCAGGGTCACCAGAA ATCTTCATACCGTGGCCCCGAACGCCACAGCTACCTCAGCTGAGCTCGGC TCGGTGGCAGGCCTTTTCCCCTGTGGGGCCCTAGTCAACCATTCCTGCCT ACCGAACTCGTGCTTCCACTGCGTGGCGGCAACTTCGTCGTCCGTGGACG GGCCTCCGGTGATCGAGCAGGTGCTGCGAACTTTCCGCAGCGTAAGGGCG GGAGACGAGCTTTGCTACTCGTACATCTCAGCCGTTGTCGCCAAGACCGT GTCGGTGAGTACTCTTGAGGGGGTTAAAAACATTTTCCATGGCCACCACA TTCTGTGGTGTAAAGCGCTCGGATCTAAAATACCGACTGCTCTTGAACAC GACGGGAAGGACTCGTTTTGCGTCTTCTTCCAGACCGCCATTTCGCCTAC AAGTGCCAGCACCTTTTCTTTTTCGTGTCTCCCCCTCTCGTTGTCATTCA TCCACGAGCATGCTCGGAGACTCAATCGAACGGCTGCGTCGCGGTCGACA CTGCTGTGCTGACTAGGCTAGGCTGTAGCTGGTCCGCACCTTGCTTGCGC ACGACGCTTTGTTTTGCGCTATGCCCTAATCAAAGATCGATTGTTTGTTT TCGCGGGATAATGAACATGTCTGCTGGATCTTAAGCAACGCCATGGCTTG CTGGAGGGGTGGGGGTTTCGATGCGCTTGCAAGAGATGCCAGCGCGAGGC TGAAGAGGACATCCGCCTGGAAACGCACCCGACTCCAGTCGACGCGTGCG GGCTTGGGATGGTGCGGCTTCTCGAGCAGATCATTCAACACACGCAGCGG TGAGATGCGTGGTGTGATTGCTTTGCGTTCTTCCTTGTCGTGAAGTTGCG TGTGCTCCAGTATGTTTCACTTGTCAGTCCCTCATGTGTAGCTTGCGGCG CCTTTTCTGTTGGTGGCCGTCGTCCGTGGTCGGGCGCTCTCTATGCGAAC AAGGTTGACTCGCTTTTCCATCCTGCCATTTCCTTGCTTCCCAAACCGAT CGGCCGCTGTGGCTGTGAAGGGCATGGTGCGATGGAGCAAATATGATTTA TTTTTCATTTTTAGCCTGCCCGGGAGAGCTGCCAAATAGCAATCGTGTTT CGCCGCTAGCTGCGTAAGGGCATGTCGTGACCGACGCCTTTACTTCACAA AACACTGCCGTGATAAATCGTTCTCAATGCTCGACTCGACACCCCCTGCG TTTTTGGTCACGAATCAGGAACGCGGCACCTCCGAAGGAAGAAGAGTGCG TGCGGCATTTCGAGGAAATCGCGCAATTCTTGGCGATGAAAGAAAATTTG GGGCTCTCGCCGCTTTTAGCGAGCAGGATTGCGATATACCTTCGTGAAGC GATCATGCTCGTCGGTGCTCCGCACCCGCTTTTGGAATTCTCGGCGTGTG GCCACGCAGCCGACGCGTTTTCGAAGATAGGCAGCCCCTTAGAGATATCT GCTCGCATGGGCGAGTACACCAGTTCAACCAAACTCGACAGATGTGAAGG ACTGAGCGAGAGCCAGAGAGAGCGATTGCAATATCCCAAAGCCGTCGGAA TCGAAGCTCTCCGCAATGCGGCACGGCTACACGAGTTGTTCTATGGAGAG GAGCACGAGCTAAGCATTACGCTCCGTAAGCGAGTAGAGGCCATTGTTCG TCGTTAGAGATGAAGCAACGCAGTTCAATCCACATGCTCCGCGCCGCCCG AACGAGAGCACTGTGTGCGTGTGCGTTTTGTGTACGTATGTACGTGTTTG ATAGAATGCTGACACTAGGAAGCAGCGTGGTACATACATAGCTTCGTTGT CGTCGAGCAGGCAGAGTTCGGAGCCTCCTTTCGTGGGGATAAACAGTGTG CGAGATTTCCTTTGGTTTTGATCGATCCGAATATTGAGTGTTGTACTGAA AACTACTGGATTCCTCCTGCTCTCGTTCGAAGCGCTGAAAAAATGGAC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1441:12309..16006-

>mRNA_L-elsbetiae_contig1441.3260.1 ID=mRNA_L-elsbetiae_contig1441.3260.1|Name=mRNA_L-elsbetiae_contig1441.3260.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3546bp|location=Sequence derived from alignment at L-elsbetiae_contig1441:12309..16006- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCAGCGTTCAAGGAGGGTTGTGTGATGGCAGCGTTCAAGGAGGGTTG
TGTGGTTCTCTACCGACCGACGCAGTCGCTGTACACCGTCGTGCGTTGGG
ATCGAGATGCGGAGGTCCTCCTGCTCACGCCGGCGGGGCGTCCTTCAGCC
GTCAACCGCACGACCGCCGCGAAAGAGCGGGCACGTACGCGATGGGTTTT
CGAGACGATGGTCGATGCTGTCGTGGAGACGACCACGGCGCCTCCGGGCG
GAGTCACGACCAAGAGAGCTACTGCTGGCGACGGCACTGCGGCGCCGACA
GAGCGCAGCGGTGGAAAAGCTTCCGCCTCGGACCCAACCCCGTACGCCCG
GCGTGCCGCAAAGCTCGACAGGCGGGTCGAGTTCCGGCGCCACCCCAAGC
ATGGCCGTGGCCTCTTCGCTCTTCGTGACATACCGGAGGGCACCGAGGTG
ATGCGGGTGCCAGCGGCGGCGGCGGTGTTGTCGGGTCGTGAGGCGGAGGG
CTCATGTGCTGGGTGTTTTCTTCCAATCAAGGCCATGGGCCGGTTAGACC
CCTGCCGCGGCTGCCCGCTCAGGTTCTGCGCCCGATGTAAAAAGGATGGT
CTGAAAGCAAACGGTGCCGGCGGCGGCGCCGGTCACAACGGTGGGACGTG
CGAGCTCACAAAGGAGTTCCTTGGGATGTGCGCGACGACTCCCGAAGGCA
GCGGCCCGCCGGATGAGGGCGTTCTGCGACTCGTGGCCGATCTCTTGGTG
AGGCGAAGGGCCGGCGTGATCAGCGACGAAGAGTGGGACCTGGTCAAGAG
CCTCGAGAGTGACGACAACGAGGCCCGTGCGATGAGCCTACCGCCCAGCG
AGCTCCAGAAATGCGCGCGATTGCTCAAGTCCCTGGTGGGAATCGACGTT
TCGCACGAAGACCTCCAGTGCCTGTACCGCAGGTTCTCTACCGACCGACG
CAGTCGCTGTACACCGTCGTGCGTTGGGATCGAGATGCGGAGGTCCTCCT
GCTCACGCCGGCGGGGCGTCCTTCAGCCGTCAACCGCACGACCGCCGCGA
AAGAGCGGGCACGTACGCGATGGGTTTTCGAGACGATGGTCGATGCTGTC
GTGGAGACGACCACGGCGCCTCCGGGCGGAGTCACGACCAAGAGAGCTAC
TGCTGGCGACGGCACTGCGGCGCCGACAGAGCGCAGCGGTGGAAAAGCTT
CCGCCTCGGACCCAACCCCGTACGCCCGGCGTGCCGCAAAGCTCGACAGG
CGGGTCGAGTTCCGGCGCCACCCCAAGCATGGCCGTGGCCTCTTCGCTCT
TCGTGACATACCGGAGGGCACCGAGGTGATGCGGGTGCCAGCGGCGGCGG
CGGTGTTGTCGGGTCGTGAGGCGGAGGGCTCATGTGCTGGGTGTTTTCTT
CCAATCAAGGCCATGGGCCGGTTAGACCCCTGCCGCGGCTGCCCGCTCAG
GTTCTGCGCCCGATGTAAAAAGGATGGTCTGAAAGCAAACGGTGCCGGCG
GCGGCGCCGGTCACAACGGTGGGACGTGCGAGCTCACAAAGGAGTTCCTT
GGGATGTGCGCGACGACTCCCGAAGGCAGCGGCCCGCCGGATGAGGGCGT
TCTGCGACTCGTGGCCGATCTCTTGGTGAGGCGAAGGGCCGGCGTGATCA
GCGACGAAGAGTGGGACCTGGTCAAGAGCCTCGAGAGTGACGACAACGAG
GCCCGTGCGATGAGCCTACCGCCCAGCGAGCTCCAGAAATGCGCGCGATT
GCTCAAGTCCCTGGTGGGAATCGACGTTTCGCACGAAGACCTCCAGTGCC
TGTACCGCAGGGTCACCAGAAATCTTCATACCGTGGCCCCGAACGCCACA
GCTACCTCAGCTGAGCTCGGCTCGGTGGCAGGCCTTTTCCCCTGTGGGGC
CCTAGTCAACCATTCCTGCCTACCGAACTCGTGCTTCCACTGCGTGGCGG
CAACTTCGTCGTCCGTGGACGGGCCTCCGGTGATCGAGCAGGTGCTGCGA
ACTTTCCGCAGCGTAAGGGCGGGAGACGAGCTTTGCTACTCGTACATCTC
AGCCGTTGTCGCCAAGACCGTGTCGGGTCACCAGAAATCTTCATACCGTG
GCCCCGAACGCCACAGCTACCTCAGCTGAGCTCGGCTCGGTGGCAGGCCT
TTTCCCCTGTGGGGCCCTAGTCAACCATTCCTGCCTACCGAACTCGTGCT
TCCACTGCGTGGCGGCAACTTCGTCGTCCGTGGACGGGCCTCCGGTGATC
GAGCAGGTGCTGCGAACTTTCCGCAGCGTAAGGGCGGGAGACGAGCTTTG
CTACTCGTACATCTCAGCCGTTGTCGCCAAGACCGTGTCGCAACGCCATG
GCTTGCTGGAGGGGTGGGGGTTTCGATGCGCTTGCAAGAGATGCCAGCGC
GAGGCTGAAGAGGACATCCGCCTGGAAACGCACCCGACTCCAGTCGACGC
GTGCGGGCTTGGGATGGTGCGGCTTCTCGAGCAGATCATTCAACACACGC
AGCGCAACGCCATGGCTTGCTGGAGGGGTGGGGGTTTCGATGCGCTTGCA
AGAGATGCCAGCGCGAGGCTGAAGAGGACATCCGCCTGGAAACGCACCCG
ACTCCAGTCGACGCGTGCGGGCTTGGGATGGTGCGGCTTCTCGAGCAGAT
CATTCAACACACGCAGCGGAACGCGGCACCTCCGAAGGAAGAAGAGTGCG
TGCGGCATTTCGAGGAAATCGCGCAATTCTTGGCGATGAAAGAAAATTTG
GGGCTCTCGCCGCTTTTAGCGAGCAGGATTGCGATATACCTTCGTGAAGC
GATCATGCTCGTCGGTGCTCCGCACCCGCTTTTGGAATTCTCGGCGTGTG
GCCACGCAGCCGACGCGTTTTCGAAGATAGGCAGCCCCTTAGAGATATCT
GCTCGCATGGGCGAGTACACCAGTTCAACCAAACTCGACAGATGTGAAGG
ACTGAGCGAGAGCCAGAGAGAGCGATTGCAATATCCCAAAGCCGTCGGAA
TCGAAGCTCTCCGCAATGCGGCACGGCTACACGAGTTGTTCTATGGAGAG
GAGCACGAGCTAAGCATTACGCTCCGTAAGCGAGTAGAGGCCATTGTTCG
TCGTTAGGAACGCGGCACCTCCGAAGGAAGAAGAGTGCGTGCGGCATTTC
GAGGAAATCGCGCAATTCTTGGCGATGAAAGAAAATTTGGGGCTCTCGCC
GCTTTTAGCGAGCAGGATTGCGATATACCTTCGTGAAGCGATCATGCTCG
TCGGTGCTCCGCACCCGCTTTTGGAATTCTCGGCGTGTGGCCACGCAGCC
GACGCGTTTTCGAAGATAGGCAGCCCCTTAGAGATATCTGCTCGCATGGG
CGAGTACACCAGTTCAACCAAACTCGACAGATGTGAAGGACTGAGCGAGA
GCCAGAGAGAGCGATTGCAATATCCCAAAGCCGTCGGAATCGAAGCTCTC
CGCAATGCGGCACGGCTACACGAGTTGTTCTATGGAGAGGAGCACGAGCT
AAGCATTACGCTCCGTAAGCGAGTAGAGGCCATTGTTCGTCGTTAG
back to top