mRNA_L-elsbetiae_contig1427.3168.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1427.3168.1 vs. uniprot
Match: D8LKH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH0_ECTSI) HSP 1 Score: 198 bits (503), Expect = 2.300e-58 Identity = 98/160 (61.25%), Postives = 116/160 (72.50%), Query Frame = 1 Query: 4 ALGDGAITDLKTKTNDDLKNIYRLCY--RSGISRYNTKDLLVECLTTLWKSTGENGEGERCSKLFIGKPSGTTAGFEGVLTTDGIVVDGSFQMTSESAGDGVDIVAHMLVRPCLVVTDIPCMMAPIAERLHPGMLQDGGALPRDSEGQVCLKELQHLGAH 477 ALGD AITDL +K+ DLKNIY LC+ R GISR+ KD LV+C LW S G GERCSKLFIGK GTTAG EG T DG++ FQ+ +ESA D VD+ AH LV P L++TDIPCM+APIAERLHP +L++ G LPRD++G V L LQHLGAH Sbjct: 169 ALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCSKLFIGKQPGTTAGVEGAFTPDGVMYANVFQIAAESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAH 328
BLAST of mRNA_L-elsbetiae_contig1427.3168.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE) HSP 1 Score: 181 bits (458), Expect = 3.210e-51 Identity = 83/108 (76.85%), Postives = 95/108 (87.96%), Query Frame = 1 Query: 154 GENGEGERCSKLFIGKPSGTTAGFEGVLTTDGIVVDGSFQMTSESAGDGVDIVAHMLVRPCLVVTDIPCMMAPIAERLHPGMLQDGGALPRDSEGQVCLKELQHLGAH 477 GE GEGERCSKLF+GKPSGTTAG EG TTDG+ V G+FQ+T ESA D VDI+AH+LV+PCLV+TDIPC + PIAERL PG+LQDGG LPRD+EGQVCLKELQH+GAH Sbjct: 2 GEQGEGERCSKLFVGKPSGTTAGVEGFFTTDGVFVYGTFQVTPESAADVVDILAHILVQPCLVITDIPCKIVPIAERLFPGLLQDGGVLPRDAEGQVCLKELQHIGAH 109
BLAST of mRNA_L-elsbetiae_contig1427.3168.1 vs. uniprot
Match: A0A6H5JUN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN3_9PHAE) HSP 1 Score: 145 bits (367), Expect = 7.110e-39 Identity = 82/175 (46.86%), Postives = 102/175 (58.29%), Query Frame = 1 Query: 4 ALGDGAITDLKTKTNDDLKNIYRLCY-----------------RSGISRYNTKDLLVECLTTLWKSTGENGEGERCSKLFIGKPSGTTAGFEGVLTTDGIVVDGSFQMTSESAGDGVDIVAHMLVRPCLVVTD-IPCMMAPIAERLHPGMLQDGGALPRDSEGQVCLKELQHLGA 474 ALGDGAITDL KT DDL+NIYRLCY R + R+ +LL++CLT W+S G G+ ERCS++FIGKPSG T G EG+ TDG++ FQ+ ESA DGVDI++H + P P GGALPR++E QVCLKELQH+GA Sbjct: 56 ALGDGAITDLSNKTKDDLQNIYRLCYPPPARVSASDFWSRQRTRPCVQRFPPLELLIQCLTRPWESAGI-GDRERCSRIFIGKPSGLTTGVEGLFGTDGVLYALVFQVARESAADGVDIISHRQSSTTMPADHGYPMHDCTHCREASPRSTPGGGALPRNAELQVCLKELQHVGA 229
BLAST of mRNA_L-elsbetiae_contig1427.3168.1 vs. uniprot
Match: A0A6H5KB28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB28_9PHAE) HSP 1 Score: 135 bits (341), Expect = 7.780e-36 Identity = 70/114 (61.40%), Postives = 85/114 (74.56%), Query Frame = 1 Query: 4 ALGDGAITDLKTKTNDDLKNIYRLCY--RSGISRYNTKDLLVECLTTLWKSTGENGEGERCSKLFIGKPSGTTAG-FEGVLTTDGIVVDGSFQMTSESAGDGVDIVAHMLVRPC 336 ALGDGAITDL K DL+NIYRLC+ GIS Y TK+LLV+CL LW+S G +GEGERCSKLFIGKPSG+TAG EG+ T D ++V FQ+T+ES D VD++ H+LV C Sbjct: 194 ALGDGAITDLSDKPVSDLENIYRLCFIDGKGISMYPTKELLVQCLQKLWESAGADGEGERCSKLFIGKPSGSTAGGVEGLFTGDRVMVAHVFQITAESPADAVDMLVHLLVTYC 307
BLAST of mRNA_L-elsbetiae_contig1427.3168.1 vs. uniprot
Match: A0A6H5JEL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL5_9PHAE) HSP 1 Score: 129 bits (324), Expect = 9.820e-34 Identity = 67/117 (57.26%), Postives = 83/117 (70.94%), Query Frame = 1 Query: 4 ALGDGAITDLKTKTNDDLKNIYRLCYRSG--ISRYNTKDLLVECLTTLWKSTGENGEGERCSKLFIGKPSGTTAGFEGVLTTDGIVVDGSFQMTSESAGDGVDIVAHMLVRPCLVVT 348 ALGDGAITDL K+ DLKNIYRLC+ G IS Y TK+LL +CL LW+ +GEGERC KLFIGKPSG+TAG EG+ T DG++ FQ+T+ES D VD++ H+ V C + T Sbjct: 132 ALGDGAITDLSDKSFGDLKNIYRLCFPDGKGISMYPTKELLAQCLQKLWELA--DGEGERCLKLFIGKPSGSTAGVEGLFTGDGVMAAHVFQITAESPADAVDMLVHLPVSYCTLST 246
BLAST of mRNA_L-elsbetiae_contig1427.3168.1 vs. uniprot
Match: A0A6H5JL59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL59_9PHAE) HSP 1 Score: 105 bits (261), Expect = 3.500e-25 Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 4 ALGDGAITDLKTKTNDDLKNIYRLCYRSGISRYNTKDLLVECLTTLWKSTGENGEGERCSKLFIGKPSGTTAGFEGVLTTDGIVVDGSFQMTSESAGDGVDIVAHMLVRPC 336 ALGDGA+TDL K+ +LLV+CL LW+S G +GE ERCSKLFIGKPSG+TAG EG+ T DG++V FQ+T+ES D VD++ H+LV C Sbjct: 58 ALGDGAVTDLSDKS----------------------ELLVQCLQKLWESAGADGERERCSKLFIGKPSGSTAGVEGLFTGDGVMVAHVFQITAESPADAVDMLVHLLVSYC 146
BLAST of mRNA_L-elsbetiae_contig1427.3168.1 vs. uniprot
Match: A0A6H5JY55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY55_9PHAE) HSP 1 Score: 104 bits (259), Expect = 4.590e-25 Identity = 55/111 (49.55%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 4 ALGDGAITDLKTKTNDDLKNIYRLCYRSG--ISRYNTKDLLVECLTTLWKSTGENGEGERCSKLFIGKPSGTTAGFEGVLTTDGIVVDGSFQMTSESAGDGVDIVAHMLVR 330 AL G + DL KT DDLKNIYRLC+ G IS Y K+ + C LW+ E +RCSK+FI +PSG TAG EG+ T DG+V Q+TSES D VD + H+ VR Sbjct: 58 ALNGGGMDDLNEKTLDDLKNIYRLCFPGGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVTSESPADVVDTMRHLAVR 168
BLAST of mRNA_L-elsbetiae_contig1427.3168.1 vs. uniprot
Match: A0A6H5K5W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W4_9PHAE) HSP 1 Score: 104 bits (259), Expect = 5.200e-23 Identity = 54/118 (45.76%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 121 VECLTTLWKSTGENGEGERCSKLFIGKPSGTTAGFEGVLTTDGIVVDGSFQMTSESAGDGVDIVAHMLVRPCLVVTDIPCMMAPIAERLHPGMLQDGGALPRDSEGQVCLKELQHLGA 474 + C LW+ E +RCSK+FI +PSG TAG EG+ T DG+V Q+ + P ++VTDIPCM+AP AE+ PG+LQ+GGALPR+++GQV L LQH+GA Sbjct: 93 IGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVVDLEPLWTPCGTWRAIATPSVLVTDIPCMVAPNAEKNVPGLLQNGGALPRNAKGQVSLPGLQHIGA 210
BLAST of mRNA_L-elsbetiae_contig1427.3168.1 vs. uniprot
Match: A0A6H5KB33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB33_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 1.710e-17 Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = 1 Query: 4 ALGDGAITDLKTKTNDDLKNIYRLCYRSG--ISRYNTKDLLVECLTTLWKSTGENGEGERCSKLFIGKPSGTTAGFEGVLTTDGIVV 258 AL G + DL KT DDLKNIYRLC+ G IS Y K+ + C LW+ E +RCSK+FI +PSG TAG EG+ T DG+ + Sbjct: 150 ALNGGGMDDLNEKTLDDLKNIYRLCFPGGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVTL 236
BLAST of mRNA_L-elsbetiae_contig1427.3168.1 vs. uniprot
Match: A0A6H5JKI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI4_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 7.270e-16 Identity = 36/55 (65.45%), Postives = 47/55 (85.45%), Query Frame = 1 Query: 310 VAHMLVRPCLVVTDIPCMMAPIAERLHPGMLQDGGALPRDSEGQVCLKELQHLGA 474 +A V+PCLV+TDIPCM+APIA++ HP +L +GGALPR++EGQV LK LQH+GA Sbjct: 10 IATTKVQPCLVITDIPCMLAPIADKNHPDLLDEGGALPRNAEGQVSLKGLQHIGA 64 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1427.3168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1427.3168.1 >prot_L-elsbetiae_contig1427.3168.1 ID=prot_L-elsbetiae_contig1427.3168.1|Name=mRNA_L-elsbetiae_contig1427.3168.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=159bp LALGDGAITDLKTKTNDDLKNIYRLCYRSGISRYNTKDLLVECLTTLWKSback to top mRNA from alignment at L-elsbetiae_contig1427:18701..19938- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1427.3168.1 ID=mRNA_L-elsbetiae_contig1427.3168.1|Name=mRNA_L-elsbetiae_contig1427.3168.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1238bp|location=Sequence derived from alignment at L-elsbetiae_contig1427:18701..19938- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1427:18701..19938- >mRNA_L-elsbetiae_contig1427.3168.1 ID=mRNA_L-elsbetiae_contig1427.3168.1|Name=mRNA_L-elsbetiae_contig1427.3168.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=954bp|location=Sequence derived from alignment at L-elsbetiae_contig1427:18701..19938- (Laminarionema elsbetiae ELsaHSoW15)back to top |