mRNA_L-elsbetiae_contig14218.3133.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14218.3133.1 vs. uniprot
Match: D8LRT5_ECTSI (Serine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT5_ECTSI) HSP 1 Score: 521 bits (1342), Expect = 4.310e-180 Identity = 278/347 (80.12%), Postives = 308/347 (88.76%), Query Frame = 1 Query: 22 MITPCARIMAVATIATTRCGSFLYGGSRFARTGARGGKQFTALHLSSTQVEHSSSSTQS--RGNADDASLDSLLISSNPTLVIEHMKARRMGEDSVEAVNRIRELVDSRREYIMTKEDALKQRDATGPLIIGKLMKAGQADEAKEKKVEVESINKVAGSAEEDLNKVDGELNTLLMRLPNLLDSRVPDGDGEEENVVVSEWGQEYIKRGEEFIWHDEVATKLGGWDPEGAAKISGARFSVLKGPLARLERAIGQWLLDMHTNEHGYTEVSVPLLVTRSSLEGTGQLPKFEDDLFKTNHLAANEDSFLIPTGEVPLTNLLRGQILDKAQV*MLCISLAVPCPTVVGGS 1056 MITPCAR+MAVAT ATTRCGSFLYGG+RFARTGA KQF ALH SS QVE ++ +S R NADDASLDS+LIS+NP LV++HMKARRMGEDSVEAV+RI +L+D+RRE IMTKEDALKQR+A I GKLMKAGQA EA+EKK EV+SINK+AGSAEEDLN+VD ELNTLLMRLPNLLDSRVPDGDGEEENVVV+EWGQEYIK GEE++WHDEVA KLGGWDPEGAA+ISGARFSVLKGPLARLERA+GQWLLD+HT EHGYTEVS+PLLVTRSSLEGTGQLPKFE+DLFKTNHL ANEDSFLIPTGEVPLTNLLRGQ+LDKAQ+ M ++L PC GS Sbjct: 1 MITPCARVMAVATFATTRCGSFLYGGARFARTGA---KQFAALH-SSAQVEQTTKDHESLSRSNADDASLDSVLISTNPDLVVDHMKARRMGEDSVEAVHRIGDLMDNRRELIMTKEDALKQRNAMSAQI-GKLMKAGQAKEAEEKKNEVQSINKIAGSAEEDLNEVDSELNTLLMRLPNLLDSRVPDGDGEEENVVVAEWGQEYIKNGEEYLWHDEVAIKLGGWDPEGAARISGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSLPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKAQLPMSLVALT-PCFRAEAGS 341
BLAST of mRNA_L-elsbetiae_contig14218.3133.1 vs. uniprot
Match: A0A835YK02_9STRA (Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK02_9STRA) HSP 1 Score: 308 bits (790), Expect = 1.800e-96 Identity = 157/286 (54.90%), Postives = 209/286 (73.08%), Query Frame = 1 Query: 199 RGNADDASLDSLLISSNPTLVIEHMKARRMGEDSVEAVNRIRELVDSRREYIMTKEDALKQRDATGPLIIGKLMKAGQADEAKEKKVEVESINKVAGSAEEDLNKVDGELNTLLMRLPNLLDSRVPDGDGEEENVVVSEWGQEYIKRGEEFIWHDEVATKLGGWDPEGAAKISGARFSVLKGPLARLERAIGQWLLDMHTNEHGYTEVSVPLLVTRSSLEGTGQLPKFEDDLFKTNHLAANEDSFLIPTGEVPLTNLLRGQILDKAQV*MLCISLAVPCPTVVGGS 1056 R +AD SLD+ +++ P +V+ +++ARR G++++E V+ I L++ R I ++ AL R I GKLMK G+ + K +V N AG+A+ +L +VD +N + MRLPNLLD+RV DG E++N +V EWGQEYIK G+E++WHD++AT+LGGWDPEGA++++GARFSVLKG LARLERA+GQW LD+HT EHGY EV+VPLLVTRS LEGTGQLPKFEDDLF+TNH EDSFLIPT EVPLTNL+RGQ+LD++ + L + PC GS Sbjct: 80 RLSADGVSLDAQVVAKQPDIVLSNLRARRAGDEAIETVSSIGGLMEQRTGLIRKRDAALNTRKTLSAQI-GKLMKEGKEGDVAAIKEQVAMANAEAGAADAELAEVDERVNDMFMRLPNLLDARVVDGSDEKDNELVLEWGQEYIKEGDEYLWHDDIATRLGGWDPEGASRVAGARFSVLKGQLARLERALGQWFLDVHTQEHGYQEVNVPLLVTRSVLEGTGQLPKFEDDLFQTNHKVGGEDSFLIPTAEVPLTNLVRGQMLDESDL-PLAFAALTPCFRAEAGS 363
BLAST of mRNA_L-elsbetiae_contig14218.3133.1 vs. uniprot
Match: A0A7S2UWA1_9STRA (Serine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWA1_9STRA) HSP 1 Score: 294 bits (753), Expect = 1.860e-91 Identity = 161/280 (57.50%), Postives = 205/280 (73.21%), Query Frame = 1 Query: 226 DSLLISSNPTLVIEHMKARRMGEDSVEAVNRIRELVDSRREYIMTKEDALKQRDATGPLIIGKLMKAGQADEAKEKKVEVESINKVAGSAEEDLNKVDGELNTLLMRLPNLLDSRVPDGDGEEENVVVSEWGQEY-IKRGEEFIWHDEVATKLGGWDPEGAAKISGARFSVLKGPLARLERAIGQWLLDMHTNEHGYTEVSVPLLVTRSSLEGTGQLPKFEDDLFKTNHLAANEDSFLIPTGEVPLTNLLRGQILDKAQV*MLCISLA--VPCPTVVGGS 1056 DS ++ N V H+ ARR GE+ +EAV++I L++ R I TK+ AL R + I GKLMKAG+ D A+EKK EVE N+ A +AE +LN+VD E+NTL LPNLLD R DGD + +N VVSEWG E +K+GE+++WHD++A +GGWDP+ ++ ISGARFSVL+GPLARLERAIGQ+ LD HT ++GY EVSVP +VTRS+LEGTGQLPKFE+DLFK NH+AA ED+FLIPT EVPLT+LLRG++LD +L ISL PC GS Sbjct: 55 DSRYVAQNGDSVKAHLLARRAGEEQLEAVDKIGVLMEKRLALIKTKDGALSIRKSVSAEI-GKLMKAGEKDAAEEKKKEVEVANQQADAAEAELNEVDAEVNTLFAGLPNLLDPRTVDGDDDTQNEVVSEWGTEGGLKKGEQYLWHDDIALGVGGWDPDASSAISGARFSVLRGPLARLERAIGQFFLDEHTQKNGYEEVSVPYVVTRSTLEGTGQLPKFEEDLFKVNHVAAGEDAFLIPTAEVPLTSLLRGKVLDPK---ILPISLTGLTPCFRAEAGS 330
BLAST of mRNA_L-elsbetiae_contig14218.3133.1 vs. uniprot
Match: A0A7S3Z8C3_9EUKA (Serine--tRNA ligase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8C3_9EUKA) HSP 1 Score: 278 bits (712), Expect = 2.130e-85 Identity = 150/270 (55.56%), Postives = 188/270 (69.63%), Query Frame = 1 Query: 193 QSRGNADDASLDSLLISSNPTLVIEHMKARRMGEDSVEAVNRIRELVDSRREYIMTKEDALKQRDATGPLIIGKLMKAGQADEAKEKKVEVESINKVAGSAEEDLNKVDGELNTLLMRLPNLLDSRVPDGDGEEENVVVSEWGQEYIKRGEEFIWHDEVATKLGGWDPEGAAKISGARFSVLKGPLARLERAIGQWLLDMHTNEHGYTEVSVPLLVTRSSLEGTGQLPKFEDDLFKTNHLAANEDSFLIPTGEVPLTNLLRGQILDKAQV 1002 + R +A D L+ NP +V+EH+KARR ED + AV I +L + RR+ I ++ AL +R T IGKLMK+G A+E K +V + N A AE L +V+GE N L RLPNLLD RVPDGD EE N +V+ WG+EYIK+GE+ WHDE+A LGG+ PE A K+SG+RFSVL+GPLARLERA+ ++LD HT EHGY E SVP LV+R LEGTGQLPKFEDDLFKTNH + DSFLIPT EVPLT+L R IL ++ + Sbjct: 14 EQRVDAQTVDYDLRLLQDNPEVVLEHLKARRAKEDVLAAVGTISKLNERRRQLIKERDAALNKRK-TLSAEIGKLMKSGDQAAAEEIKAQVSAANAQAAEAEATLAEVEGECNALFARLPNLLDQRVPDGDSEENNELVTLWGEEYIKKGEDMKWHDELAATLGGYAPEAAVKVSGSRFSVLRGPLARLERALSAFMLDTHTLEHGYEEHSVPYLVSRQVLEGTGQLPKFEDDLFKTNHDISGMDSFLIPTAEVPLTSLYRDDILQESNL 282
BLAST of mRNA_L-elsbetiae_contig14218.3133.1 vs. uniprot
Match: W7TYV7_9STRA (Serine--tRNA ligase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYV7_9STRA) HSP 1 Score: 270 bits (689), Expect = 1.760e-81 Identity = 143/278 (51.44%), Postives = 194/278 (69.78%), Query Frame = 1 Query: 223 LDSLLISSNPTLVIEHMKARRMGEDSVEAVNRIRELVDSRREYIMTKEDALKQRDATGPLIIGKLMKAGQADEAKEKKVEVESINKVAGSAEEDLNKVDGELNTLLMRLPNLLDSRVPDGDGEEENVVVSEWGQEYIKRGEEFIWHDEVATKLGGWDPEGAAKISGARFSVLKGPLARLERAIGQWLLDMHTNEHGYTEVSVPLLVTRSSLEGTGQLPKFEDDLFKTNHLAANEDSFLIPTGEVPLTNLLRGQILDKAQV*MLCISLAVPCPTVVGGS 1056 LD L++ P LV+ H++ARR ++ +V+ I +L R+E + ++ AL QR + I GKLM+ Q EA + K +VE N VA +AEE L++++ E+++L++++PNLLD RVPDGD E N VV EWG E K GE ++WHD++A KLGG+DP AA++SGARFS+L GPLARLERAI Q+ LD HT E+GY EVSVP +V+RS+L GTGQLPKFE+DLF NH ED+FLIPT EVP+TNL R +IL+ Q+ + + L PC GS Sbjct: 85 LDVKLVTEEPDLVLAHLEARRASDEQASSVSDIADLYLRRKELVKEQQGALTQRKSLSAEI-GKLMREKQDAEAAKLKTQVEYANSVASTAEEQLHQLEREMDSLMLQMPNLLDDRVPDGDDELNNEVVLEWGVERRKVGERYLWHDDIAAKLGGYDPAAAARLSGARFSILSGPLARLERAIVQFFLDQHTAENGYREVSVPYIVSRSTLTGTGQLPKFEEDLFAVNHQVNGEDAFLIPTAEVPITNLHRDEILEATQLPLSYVGLT-PCFRAEAGS 360
BLAST of mRNA_L-elsbetiae_contig14218.3133.1 vs. uniprot
Match: A0A7S3Y0F1_HETAK (Serine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0F1_HETAK) HSP 1 Score: 246 bits (627), Expect = 1.100e-72 Identity = 140/291 (48.11%), Postives = 183/291 (62.89%), Query Frame = 1 Query: 184 SSTQSRGNADDASLDSLLISSNPTLVIEHMKARRMGEDSVEAVNRIRELVDSRREYIMTKEDALKQRDATGPLIIGKLMKAGQADEAKEKKVEVESINKVAGSAEEDLNKVDGELNTLLMRLPNLLDSRVPDGDGEEENVVVSEWGQEYIKRGEEFIWHDEVATKLGGWDPEGAAKISGARFSVLKGPLARLERAIGQWLLDMHTNEHGYTEVSVPLLVTRSSLEGTGQLPKFEDDLFKTNHLAANEDSFLIPTGEVPLTNLLRGQILDKAQV*MLCISLAVPCPTVVGGS 1056 S+T +R + D A+ D+ ++ NP + H+ ARR G + + +V RI EL +RRE I ++ AL R A I G+ MKAG + A KK EV NLLD+ VP+GD + +N +V EW + +KRGEE++WHDE+A KLGG+ PE AA++SGARFSVL GP+ARLERA+ Q+ LD+HT EHGY EV+ P +VTRS+L GTGQLPKFEDDLFK +H AA ED+FLIPT EVPLTNL RG+IL+ + L + PC GS Sbjct: 45 STTVARFDPDGAAYDARFVAENPEGIRAHLAARRAGAEQLASVGRIEELSGARRELIGRRDAALGVRKALSAEI-GQAMKAGDQELAAAKKAEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLDAAVPEGDDDGQNELVREWNTDNLKRGEEYLWHDEIAAKLGGFLPESAARLSGARFSVLAGPVARLERALMQFALDLHTLEHGYLEVATPYIVTRSTLRGTGQLPKFEDDLFKVSHEAAGEDAFLIPTSEVPLTNLHRGEILEGKAL-PLAFAACTPCFRAEAGS 333
BLAST of mRNA_L-elsbetiae_contig14218.3133.1 vs. uniprot
Match: A0A7S3MC65_9STRA (Serine--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MC65_9STRA) HSP 1 Score: 234 bits (597), Expect = 6.050e-68 Identity = 128/265 (48.30%), Postives = 179/265 (67.55%), Query Frame = 1 Query: 208 ADDASLDSLLISSNPTLVIEHMKARRMGEDSVEAVNRIRELVDSRREYIMTKEDALKQRDATGPLIIGKLMKAGQADEAKEKKVEVESINKVAGSAEEDLNKVDGELNTLLMRLPNLLDSRVPDGDGEEENVVVSEWGQEYIKRGEEFIWHDEVATKLGGWDPEGAAKISGARFSVLKGPLARLERAIGQWLLDMHTNEHGYTEVSVPLLVTRSSLEGTGQLPKFEDDLFKTNHLAANEDSFLIPTGEVPLTNLLRGQILDKAQV 1002 A++ SLD+ L+S P LVI H+++R++ +++ V +++L R+ I A R I G L+K + DE E K +VE+ ++ + +A+E L ++ ++ + LPNLLD VP+G E NVV WG E K GEE++WHD++A K+ G D E A ++SGARFSVL GP+ARLERA+ Q++LD HT E GYTEVSVP +V+RS+LEGTGQLPKFEDDLF+ NH A E++FLIPT EVPLTNL R QIL ++ + Sbjct: 52 ANELSLDTNLLSEQPDLVISHLQSRKVDPLTLDKVFAVKDLQTERKTLIFNSNTAKNVRKVLSKEI-GALLKQEKHDEVAELKAKVEAAHQTSSAADEKLTHIEKSIHDIWASLPNLLDDSVPEGHDEAHNVVEFTWGAENRKIGEEYLWHDDLARKVHGIDLEAANRMSGARFSVLLGPVARLERALTQFMLDRHT-ERGYTEVSVPFIVSRSTLEGTGQLPKFEDDLFQVNHTAGGEEAFLIPTAEVPLTNLFREQILYESDL 314
BLAST of mRNA_L-elsbetiae_contig14218.3133.1 vs. uniprot
Match: F0Y990_AURAN (Serine--tRNA ligase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y990_AURAN) HSP 1 Score: 227 bits (579), Expect = 1.260e-65 Identity = 138/305 (45.25%), Postives = 190/305 (62.30%), Query Frame = 1 Query: 100 SRFARTGARGGKQFTALHLSSTQVEHSSSSTQSRGNADDASLDSLLISSNPTLVIEHMKARRMGEDSVEAVNRIRELVDSRREYIMTKEDALKQRDATGPLIIGKLMKAGQAD-EAKEKKVEVESINKVAGSAEEDLNKVDGELNTLLMRLPNLLDSRVPDGDGEEENVVVSEWGQEYIKRGEE--FIWHDEVATKLGGWDPEGAAKISGARFSVLKGPLARLERAIGQWLLDMHTNEHGYTEVSVPLLVTRSSLEGTGQLPKFEDDLFKT-NHLAANEDSFLIPTGEVPLTNLLRGQILDKAQV 1002 S AR G +F+A+ + + +R +A SL+ + + V H++AR+ E++V +V+R+ L + R ++ AL R A IGK MK G A+ + K EV + VA AE + ++ E N L LPNLLD PDG GE ENVVV+EWG + K G+E ++WHD++A LGG+D E A+K+SGARF+VL+G +ARLERA+G + LDMHT+ GY EVS P++V RS+LEGTGQLPKFEDDLFK NH ED+FLIPT EVPLTNL+ G IL+++ + Sbjct: 10 SGLARRGRASSARFSAV----------ADAVSTRPSAAGVSLELRTLKDHADTVKAHVRARQGSEETVASVDRMVALTEQRAAAQRERDAALSTRKALSG-DIGKAMKTGAAEADVAALKAEVAASADVAEGAEATMAALEEEANALFAALPNLLDDATPDGAGETENVVVAEWGTDSRKLGDEGDYLWHDDLAAGLGGFDAEAASKVSGARFAVLRGGVARLERALGAFFLDMHTDGGGYEEVSSPVIVARSALEGTGQLPKFEDDLFKLDNHKVRGEDAFLIPTAEVPLTNLVAGDILEESDL 303
BLAST of mRNA_L-elsbetiae_contig14218.3133.1 vs. uniprot
Match: A0A8J5X803_DIALT (Serine--tRNA ligase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X803_DIALT) HSP 1 Score: 227 bits (579), Expect = 1.710e-65 Identity = 134/279 (48.03%), Postives = 176/279 (63.08%), Query Frame = 1 Query: 220 SLDSLLISSNPTLVIEHMKARRMGEDSVEAVNRIRELVDSRREYIMTKEDALKQRDATGPLIIGKLMKAGQADEAKEKKVEVESINKVAGSAEEDLNKVDGELNTLLMRLPNLLDSRVPDGDGEEENVVVSEWGQEYIKRGEEFIWHDEVATKLGGWDPEGAAKISGARFSVLKGPLARLERAIGQWLLDMHTNEHGYTEVSVPLLVTRSSLEGTGQLPKFEDDLFKTNHLAANEDSFLIPTGEVPLTNLLRGQILDKAQV*MLCISLAVPCPTVVGGS 1056 SLD+ L+S +P +V E ++ RR + + A+ I EL + L R P I G L+K G EA+ K +V + + A EE L V+ E LL LPNLLD RVPDG + +N +VS+W R E WHDE+AT+LGG D +GAAKISGARFSVL+GP+ARLERA+ + LD+HT +HGYTE++VP++V R +LEGTGQLPKFEDDLFK + D+FLIPT EVPLTNLL G+IL +A + + ++L PC GS Sbjct: 56 SLDAKLVSDSPDVVAESLRRRRAPAEQLRALETIGELQRRYAQLSFEVSSQLGVRKQLSPQI-GALLKQGNEAEAEVLKEQVAAASAEAKRLEELLAAVELERAALLDALPNLLDPRVPDGADDTDNELVSQWQPAAGVRPETGDWHDEIATRLGGLDVDGAAKISGARFSVLRGPIARLERALANFFLDLHTGQHGYTEMAVPVIVGRGALEGTGQLPKFEDDLFKLSAPVNGRDAFLIPTAEVPLTNLLAGEILPEASLPLAFVALT-PCFRAEAGS 332
BLAST of mRNA_L-elsbetiae_contig14218.3133.1 vs. uniprot
Match: A0A7S2SGV2_9STRA (Serine--tRNA ligase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGV2_9STRA) HSP 1 Score: 222 bits (566), Expect = 1.960e-65 Identity = 116/208 (55.77%), Postives = 148/208 (71.15%), Query Frame = 1 Query: 436 DEAKEKKVEVESINKVAGSAEEDLNKVDGELNTLLMRLPNLLDSRVPDGDGEEENVVVSEWGQEYIKRGEEFIWHDEVATKLGGWDPEGAAKISGARFSVLKGPLARLERAIGQWLLDMHTNEHGYTEVSVPLLVTRSSLEGTGQLPKFEDDLFKT-NHLAANEDSFLIPTGEVPLTNLLRGQILDKAQV*MLCISLAVPCPTVVGGS 1056 +EA+ K +VE N++A AE +L VD + LL +PNLL + PDG GE+EN +V EWG + GE+F+WHDE+A +L GW+PEGAAK++GARFSVL G +ARLERA+ Q+ LD HT YTE++VP +V RS LEGTGQLPKFEDDLFK NH A ED+FLIPT EVPLTNL RG+ILD+ ++ L ++ PC GS Sbjct: 2 EEAEALKAQVEEANRIADGAEAELEAVDSQCKQLLDAMPNLLHDQTPDGKGEQENELVKEWGTDQRMIGEDFLWHDEIAERLNGWNPEGAAKLAGARFSVLSGAVARLERALVQFFLDTHTKNE-YTEMAVPYIVGRSVLEGTGQLPKFEDDLFKLENHQANAEDAFLIPTAEVPLTNLYRGEILDQGRL-PLSMTALTPCFRAEAGS 207 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14218.3133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14218.3133.1 >prot_L-elsbetiae_contig14218.3133.1 ID=prot_L-elsbetiae_contig14218.3133.1|Name=mRNA_L-elsbetiae_contig14218.3133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=328bp MITPCARIMAVATIATTRCGSFLYGGSRFARTGARGGKQFTALHLSSTQVback to top mRNA from alignment at L-elsbetiae_contig14218:987..4689+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14218.3133.1 ID=mRNA_L-elsbetiae_contig14218.3133.1|Name=mRNA_L-elsbetiae_contig14218.3133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3703bp|location=Sequence derived from alignment at L-elsbetiae_contig14218:987..4689+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14218:987..4689+ >mRNA_L-elsbetiae_contig14218.3133.1 ID=mRNA_L-elsbetiae_contig14218.3133.1|Name=mRNA_L-elsbetiae_contig14218.3133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1968bp|location=Sequence derived from alignment at L-elsbetiae_contig14218:987..4689+ (Laminarionema elsbetiae ELsaHSoW15)back to top |