|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 2 |
Model size | 906 |
Cds size | 543 |
Stop | 1 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815557.4207704-CDS-L-elsbetiae_contig1407:17663..17721 | 1622815557.4207704-CDS-L-elsbetiae_contig1407:17663..17721 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1407 17664..17721 + |
1691682958.2223792-CDS-L-elsbetiae_contig1407:17663..17721 | 1691682958.2223792-CDS-L-elsbetiae_contig1407:17663..17721 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1407 17664..17721 + |
1622815557.4318194-CDS-L-elsbetiae_contig1407:18375..18860 | 1622815557.4318194-CDS-L-elsbetiae_contig1407:18375..18860 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1407 18376..18860 + |
1691682958.231317-CDS-L-elsbetiae_contig1407:18375..18860 | 1691682958.231317-CDS-L-elsbetiae_contig1407:18375..18860 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1407 18376..18860 + |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815557.4424126-UTR-L-elsbetiae_contig1407:18860..19221 | 1622815557.4424126-UTR-L-elsbetiae_contig1407:18860..19221 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1407 18861..19221 + |
1691682958.239601-UTR-L-elsbetiae_contig1407:18860..19221 | 1691682958.239601-UTR-L-elsbetiae_contig1407:18860..19221 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1407 18861..19221 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1407.3037.1 >prot_L-elsbetiae_contig1407.3037.1 ID=prot_L-elsbetiae_contig1407.3037.1|Name=mRNA_L-elsbetiae_contig1407.3037.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp
TPSHSPPGRCWYPTFRRKQGVNNGIWKFDRRRKSEPRGRGKQLCGRSCPE TQVPLEQRGIGGQLVGVHTLGRRIGRFIGRIGRRIGRDRDQGGWRWSRER GPRSCQERQRGRPEGVYSVRQSQQHPARPRRRRQDAVQGAEGTRGAQGGV FSRQETQEEYGRSCTGTAPYISRFFLNGHP* back to topmRNA from alignment at L-elsbetiae_contig1407:17664..19221+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1407.3037.1 ID=mRNA_L-elsbetiae_contig1407.3037.1|Name=mRNA_L-elsbetiae_contig1407.3037.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1558bp|location=Sequence derived from alignment at L-elsbetiae_contig1407:17664..19221+ (Laminarionema elsbetiae ELsaHSoW15) ACTCCCTCACACTCTCCGCCTGGTAGATGCTGGTACCCGACATTCCGAAG
GAAACAGGTGAGAATTTATACTTTCTCCAAACTATCGACCACACTCTGTA
GGCGCCTACACAACACGCGTGCCTCGTCGATTAGAGCACTCTTTGTACAG
CCCGGTCCCTCCGAATCCTCAGAAATATCGGAGGTCTCTGAATCGCACGG
CGTAGCGCACCCATCGACACTAGGCGGAAGGGTACAGTGGCTAGACAACG
AACTCGCCCGGCTCGAAATACTTCTACTGGGGTCGCCCTTGGCTTTGCTT
TTCCCCTTCTTGCTGCCACCACTGTCCTTCTTCACACGTTTGCCCCTTGG
CTTGTCCTTTGCCTTACCCTTCGGCTTGCATTCGACACTATCGTCGGAGT
GTATGTCAGCGGGGCTGTCGCACGATTCGATTCGCTTGAGATGTATAAGC
GCTCCTTTGGAATTTAGGAGCTTTTTCATTATGCGGACCTCGTCGTGAGA
CAGGTTGGCGTACTGGTATCTACACTCAACGTTGGAGTCATCGTCGAAAG
GCCGGCTTTTACTGTCAAAGCGCTTTTTGAACATCTTGAGCAGCTTCTCA
ACTGACTTGTCGATCGCCGAAGCCTTGGTGAAATTGGCGTCGCAGATTAC
ACGAATTGTTGACATGCCTGTTGCTGACTCAACCTGTTAACTCAACAACC
ACATTTTTTTCCGTGTTAACAATGGCATCTGGAAATTCGACCGGCGGAGG
AAATCTGAACCCAGAGGGCGCGGAAAACAACTCTGTGGCAGGAGCTGCCC
AGAAACCCAAGTACCCCTCGAGCAGCGAGGGATCGGTGGACAGCTCGTCG
GAGTTCATACCCTCGGGCGGAGAATCGGGCGATTCATCGGACGAATCGGG
AGACGAATCGGGCGAGACCGAGACCAAGGGGGGTGGAGGTGGAGCCGGGA
GCGAGGTCCCCGATCATGTCAAGAACGGCAACGAGGTCGCCCGGAGGGTG
TATATTCGGTACGCCAAAGCCAACAACATCCAGCTCGGCCCCGTCGGCGA
CGCCAAGACGCCGTCCAGGGGGCGGAGGGGACCCGGGGCGCGCAAGGCGG
AGTGTTCTCCCGCCAAGAAACTCAGGAAGAGTACGGGCGGAGCTGCACGG
GCACCGCTCCCTATATTTCGCGGTTTTTCTTAAACGGACACCCGTAGGAC
AAAGAACAGTAAACGAAACCCGTAGCTCTTGGTGATAAACCTTTTATGTT
GCTGGATGTAGTCATTATTTTGTATCGCAAGTGCAACGGTAAATATGTCG
GCAGAAAGAACCATCCCTCACCCGTCTATTAGCCTGGAACATTTGTCAGT
GGTAGCGTGTGGGAGTAGTATACATAACGACAAGAATCAGGTCGGTCTAG
GTAGTACACAGAGTAATTCTACCTTTGTGTACGACGCACCGGGGCAAACT
ACGACGGAAGTAGGCAGAAACGATGTTGTATTGGACCCCTCGGGGGACAG
CGCCAGCGTGACACTAGGTACACTTGTCACCGCCGGCGGGGGCCAGAGCA
TGAAGGGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1407:17664..19221+ >mRNA_L-elsbetiae_contig1407.3037.1 ID=mRNA_L-elsbetiae_contig1407.3037.1|Name=mRNA_L-elsbetiae_contig1407.3037.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1086bp|location=Sequence derived from alignment at L-elsbetiae_contig1407:17664..19221+ (Laminarionema elsbetiae ELsaHSoW15) ACTCCCTCACACTCTCCGCCTGGTAGATGCTGGTACCCGACATTCCGAAG GAAACAGGACTCCCTCACACTCTCCGCCTGGTAGATGCTGGTACCCGACA TTCCGAAGGAAACAGGGTGTTAACAATGGCATCTGGAAATTCGACCGGCG GAGGAAATCTGAACCCAGAGGGCGCGGAAAACAACTCTGTGGCAGGAGCT GCCCAGAAACCCAAGTACCCCTCGAGCAGCGAGGGATCGGTGGACAGCTC GTCGGAGTTCATACCCTCGGGCGGAGAATCGGGCGATTCATCGGACGAAT CGGGAGACGAATCGGGCGAGACCGAGACCAAGGGGGGTGGAGGTGGAGCC GGGAGCGAGGTCCCCGATCATGTCAAGAACGGCAACGAGGTCGCCCGGAG GGTGTATATTCGGTACGCCAAAGCCAACAACATCCAGCTCGGCCCCGTCG GCGACGCCAAGACGCCGTCCAGGGGGCGGAGGGGACCCGGGGCGCGCAAG GCGGAGTGTTCTCCCGCCAAGAAACTCAGGAAGAGTACGGGCGGAGCTGC ACGGGCACCGCTCCCTATATTTCGCGGTTTTTCTTAAACGGACACCCGTA GGTGTTAACAATGGCATCTGGAAATTCGACCGGCGGAGGAAATCTGAACC CAGAGGGCGCGGAAAACAACTCTGTGGCAGGAGCTGCCCAGAAACCCAAG TACCCCTCGAGCAGCGAGGGATCGGTGGACAGCTCGTCGGAGTTCATACC CTCGGGCGGAGAATCGGGCGATTCATCGGACGAATCGGGAGACGAATCGG GCGAGACCGAGACCAAGGGGGGTGGAGGTGGAGCCGGGAGCGAGGTCCCC GATCATGTCAAGAACGGCAACGAGGTCGCCCGGAGGGTGTATATTCGGTA CGCCAAAGCCAACAACATCCAGCTCGGCCCCGTCGGCGACGCCAAGACGC CGTCCAGGGGGCGGAGGGGACCCGGGGCGCGCAAGGCGGAGTGTTCTCCC GCCAAGAAACTCAGGAAGAGTACGGGCGGAGCTGCACGGGCACCGCTCCC TATATTTCGCGGTTTTTCTTAAACGGACACCCGTAG back to top
|