mRNA_L-elsbetiae_contig13970.2970.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13970.2970.1 vs. uniprot
Match: D8LBG4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBG4_ECTSI) HSP 1 Score: 219 bits (557), Expect = 4.520e-71 Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 1 Query: 1 MDRGRRAMPVQNKACHERHVKKCQDNHRLRLAKMKPTIDCHAPSSMRKVAAKTNAKKQQIMEDRYAQIERDNRLLLEKMSHIMRKGGVDNHNSTSKYAKSLNKEARKKELHKITTENQ 354 MDRGRRAMPVQNKAC+ERHVKKCQDNHR RLAKMKPTIDCHAPSSMRKVA KTNAKKQQIMEDRYAQIERDNRLLLEKMSHIMRKGGVDNHNSTSKY+KSLNK ARKKELHKITTENQ Sbjct: 1 MDRGRRAMPVQNKACYERHVKKCQDNHRDRLAKMKPTIDCHAPSSMRKVATKTNAKKQQIMEDRYAQIERDNRLLLEKMSHIMRKGGVDNHNSTSKYSKSLNKGARKKELHKITTENQ 118
BLAST of mRNA_L-elsbetiae_contig13970.2970.1 vs. uniprot
Match: A0A836CD52_9STRA (KIAA1430-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD52_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.920e-38 Identity = 77/121 (63.64%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 1 MDRGRRAMPVQNKACHERHVKKCQDNHRLRLAKMKPTIDCHAPSSMRKVAAKTNAKKQQIMEDRYAQIERDNRLLLEKMSHIMRKGGV----DNHNSTSKYAKSLNKEARKKELHKITTEN 351 MDRGRRAMP NKACHERHV+KCQD HR +L +K TID P ++R VA TNAKKQQ+MEDRYAQIERDNR+LLEKMS IMR ++ + ++YAKSLN+E+RK+EL +IT EN Sbjct: 1 MDRGRRAMPTGNKACHERHVRKCQDLHRQQLTSIKSTIDNKPPKTLRAVAG-TNAKKQQLMEDRYAQIERDNRILLEKMSTIMRSRPTVALAESVEAQARYAKSLNRESRKRELQRITREN 120
BLAST of mRNA_L-elsbetiae_contig13970.2970.1 vs. uniprot
Match: A0A7S2V2P0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2P0_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.560e-35 Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 1 MDRGRRAMPVQNKACHERHVKKCQDNHRLRLAKMKPTIDCHAPSSMRKVAAKTNAKKQQIMEDRYAQIERDNRLLLEKMSHIMRKGGVDNHNSTSKYAKSLNKEARKKELHKITTENQ 354 MDRGRRAMPV NK C++R++K CQ+ HR +LA MK +D P + + N KK+Q+MEDR+A IERDNR+LLEKMS+IMR+ DN N ++ YA SLNKEARK+EL KIT ENQ Sbjct: 1 MDRGRRAMPVGNKTCNDRYIKMCQEKHRKKLADMKCRVDNKPPD--KPAHLRRNLKKEQLMEDRFATIERDNRILLEKMSYIMRRNQFDNTNESTAYAHSLNKEARKRELQKITRENQ 116
BLAST of mRNA_L-elsbetiae_contig13970.2970.1 vs. uniprot
Match: A0A7S3USY4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USY4_HETAK) HSP 1 Score: 125 bits (315), Expect = 6.910e-34 Identity = 71/118 (60.17%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 1 MDRGRRAMPVQNKACHERHVKKCQDNHRLRLAKMKPTIDCHAPSSMRKVAAKTNAKKQQIMEDRYAQIERDNRLLLEKMSHIMRKGGVDNHNSTSKYAKSLNKEARKKELHKITTENQ 354 MDRGRRAMPV NK C++R V++ Q HR +LA+MK ID AP R + N KK+Q+MEDR+A IERDNR+LLEKMS+IMR+ DN N +++YA SLNKEARK+EL +IT ENQ Sbjct: 1 MDRGRRAMPVGNKLCNQRAVQQAQQKHRKKLAEMKCRIDNTAPD--RPAHLRRNLKKEQLMEDRFATIERDNRILLEKMSYIMRRNQFDNVNESTQYAHSLNKEARKRELQRITRENQ 116
BLAST of mRNA_L-elsbetiae_contig13970.2970.1 vs. uniprot
Match: A0A7S2P7L5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P7L5_9STRA) HSP 1 Score: 115 bits (288), Expect = 9.150e-30 Identity = 68/119 (57.14%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 1 MDRGRRAMPVQNKACHERHVKKCQDNHRLRLAKMKPTIDCHAPSSMRKVAAKTNAKKQQIMEDRYAQIERDNRLLLEKMSHIMR-KGGVDNHNSTSKYAKSLNKEARKKELHKITTENQ 354 MDRGR+AMPVQNKAC+ERHVKK L MK +ID P + KT AKK ++E+R QIE +NRLLLEKMSHIMR KG +DN NS+S+Y +SLNK+ RK+EL +IT +N+ Sbjct: 1 MDRGRKAMPVQNKACNERHVKKXXXXXXXXLRDMKSSIDNKEPRMASHL--KTKAKKNALVEERLKQIETENRLLLEKMSHIMRCKGSIDNKNSSSQYGRSLNKDQRKRELTRITKQNK 117
BLAST of mRNA_L-elsbetiae_contig13970.2970.1 vs. uniprot
Match: F0Y0R8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0R8_AURAN) HSP 1 Score: 112 bits (281), Expect = 1.660e-29 Identity = 63/110 (57.27%), Postives = 79/110 (71.82%), Query Frame = 1 Query: 25 PVQNKACHERHVKKCQDNHRLRLAKMKPTIDCHAPSSMRKVAAKTNAKKQQIMEDRYAQIERDNRLLLEKMSHIMRKGGVDNHNSTSKYAKSLNKEARKKELHKITTENQ 354 P+ NK CH R VKKCQ+ H+ +L +MK +ID H P R + N KK+Q+ME+RYA+IERDNRLLLEKMS+IMR +DN N YA SLN+E RK+EL +IT ENQ Sbjct: 1 PIGNKQCHARFVKKCQETHKKKLHEMKCSIDNHEPK--RHPHLRKNLKKEQLMEERYAEIERDNRLLLEKMSYIMRHSSLDNDNQMQ-YAHSLNREQRKRELQRITRENQ 107
BLAST of mRNA_L-elsbetiae_contig13970.2970.1 vs. uniprot
Match: A0A8K1CSC9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSC9_PYTOL) HSP 1 Score: 112 bits (279), Expect = 9.000e-29 Identity = 65/124 (52.42%), Postives = 87/124 (70.16%), Query Frame = 1 Query: 1 MDRGRRAMPVQNKACHERHVKKCQDNHRLRLAKMKPTIDC---HAPSSMRKVAAKTNAKKQQIMEDRYAQIERDNRLLLEKMSHIMRKGGVDNHNSTSKYAKSLNKEARKKELHKITTENQVHL 363 MDRGR+A+P NK ++ +KCQ+ HRL+L +K +ID H P +RK N KK+Q+ E+RYA+IER+NR+LLEKMSHIM+ +DN N + Y+ SLNKE+RK+EL KIT ENQ L Sbjct: 1 MDRGRKAIPTLNKHTDSKYYQKCQEIHRLKLNTIKSSIDNSEPHRPLHLRK-----NLKKEQMKEERYAEIERENRILLEKMSHIMQNETLDNKNQSITYSHSLNKESRKRELQKITAENQAIL 119
BLAST of mRNA_L-elsbetiae_contig13970.2970.1 vs. uniprot
Match: A0A3R7GA00_9STRA (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A3R7GA00_9STRA) HSP 1 Score: 107 bits (266), Expect = 4.810e-27 Identity = 63/124 (50.81%), Postives = 85/124 (68.55%), Query Frame = 1 Query: 1 MDRGRRAMPVQNKACHERHVKKCQDNHRLRLAKMKPTIDC---HAPSSMRKVAAKTNAKKQQIMEDRYAQIERDNRLLLEKMSHIMRKGGVDNHNSTSKYAKSLNKEARKKELHKITTENQVHL 363 MDRGR+A+P NK ++ +KCQ+ HR +L +K +ID H P+ +RK N KK+Q+ E+RYA IER+NR+LLEKMS IM+ +DN N + Y+ SLNKE RK+EL KIT+ENQ L Sbjct: 1 MDRGRKAIPTLNKHTDSKYYQKCQEIHRAKLYSIKSSIDNSEPHRPTHLRK-----NLKKEQMKEERYAAIERENRILLEKMSTIMQGESIDNKNQSLTYSHSLNKEQRKRELQKITSENQAIL 119
BLAST of mRNA_L-elsbetiae_contig13970.2970.1 vs. uniprot
Match: K3WRK6_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WRK6_GLOUD) HSP 1 Score: 107 bits (266), Expect = 8.640e-27 Identity = 62/121 (51.24%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 1 MDRGRRAMPVQNKACHERHVKKCQDNHRLRLAKMKPTIDCHAPSSMRKVAAKTNAKKQQIMEDRYAQIERDNRLLLEKMSHIMRKGGVDNHNSTSKYAKSLNKEARKKELHKITTENQVHL 363 MDRGR+A+P NK ++ +KCQ+ HR +L +K +ID P R K N KK+Q+ E+RYA+IER+NR+LLEKMSHIM+ +DN N + Y+ SLNK RK+EL KIT+ENQ L Sbjct: 1 MDRGRKAIPTLNKHTDSKYYQKCQEIHRSKLNTIKSSIDNSEPH--RPTHLKKNLKKEQMKEERYAEIERENRILLEKMSHIMQNETLDNKNQSIVYSHSLNKGLRKRELQKITSENQAIL 119
BLAST of mRNA_L-elsbetiae_contig13970.2970.1 vs. uniprot
Match: A0A7S2WX22_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX22_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.730e-26 Identity = 60/122 (49.18%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 1 MDRGRRAMPVQNKACHERHVKKCQDNHRLRLAKMKPTIDCHAPSSMRKVAAKTNAKKQQIMEDRYAQIERDNRLLLEKMSHIMRKGGVDNHNSTS-KYAKSLNKEARKKELHKITTENQVHL 363 MDR R+ MP+ NKAC++RHVKK Q+ HR RLA MK +IDC P + + N KK+Q+ME+RYA+IE+DNRLLLE+MS+I++ G+D + + K A SL ++ R++++ +IT +NQ+ L Sbjct: 1 MDRFRKVMPMGNKACYDRHVKKNQERHRQRLASMKCSIDCAPPRRFPHL--ERNQKKEQLMEERYAEIEKDNRLLLERMSYILKCKGMDCYATPHMKLAHSLTRDERRRDMDRITRDNQLLL 120 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13970.2970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13970.2970.1 >prot_L-elsbetiae_contig13970.2970.1 ID=prot_L-elsbetiae_contig13970.2970.1|Name=mRNA_L-elsbetiae_contig13970.2970.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp MDRGRRAMPVQNKACHERHVKKCQDNHRLRLAKMKPTIDCHAPSSMRKVAback to top mRNA from alignment at L-elsbetiae_contig13970:626..1239+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13970.2970.1 ID=mRNA_L-elsbetiae_contig13970.2970.1|Name=mRNA_L-elsbetiae_contig13970.2970.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=614bp|location=Sequence derived from alignment at L-elsbetiae_contig13970:626..1239+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13970:626..1239+ >mRNA_L-elsbetiae_contig13970.2970.1 ID=mRNA_L-elsbetiae_contig13970.2970.1|Name=mRNA_L-elsbetiae_contig13970.2970.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig13970:626..1239+ (Laminarionema elsbetiae ELsaHSoW15)back to top |