mRNA_L-elsbetiae_contig137.2817.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig137.2817.1 vs. uniprot
Match: A0A6H5KEX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEX8_9PHAE) HSP 1 Score: 451 bits (1159), Expect = 1.760e-151 Identity = 237/314 (75.48%), Postives = 259/314 (82.48%), Query Frame = 3 Query: 231 MGSRLAFAMGA---NSFPVHRHTPMHAKRLLTMSAPPEVLCLDCTGTIMRIKGSMPRLYLGVLEDRLGVPEGGLPDKVSESDLLDSFKTSLKQRSKELPCFGAGVMSSEDWWEEVVRATFRGAGVSDKTLGIDEGRNDNGGS--------GGIFDDVFGRLFHDVFTSTTAWELVPGAEEVLEDLRAWCQEDGGPQALGAVSNFDERLHPLLKNLGVYDSFDFVLTSRECGSEKPNPGIFLEAAKLAGASGG-DGGGRGVLVGDTFRTDVLGARSVGWDAVLITRGKDPAGDDEREMDH-VRVDNLRAVPAALG 1133 +GSRLA A A + PV P +RLLTM A P+V+CLDCTGTIMRIKGSMPRLYLGVLEDRLGV EGGLPDKVSE DLL+SF+ SLK+RSKELPCFG GVMSSEDWW EVV ATFRGAGVSD+TLGI + + GG G +FDDVF RLFHDVFTSTTAWELVPGAEEVLEDLRAW E GGP+ALGAVSNFDERLHPLLKNLGVY+SFDFVLTSRECGSEKP P +F EA K AG+SGG DG GRGV+VGDTFRTDVLGARSVGWDAVLITRGKDPA ++E++ H RVD+LR VPAALG Sbjct: 2 LGSRLASASSAVKWSHLPVITPPPS-TRRLLTMRAGPDVVCLDCTGTIMRIKGSMPRLYLGVLEDRLGVSEGGLPDKVSEQDLLNSFRASLKRRSKELPCFGTGVMSSEDWWAEVVMATFRGAGVSDETLGISQEGDRGGGXXXXXXXXXGRVFDDVFDRLFHDVFTSTTAWELVPGAEEVLEDLRAWVGEAGGPRALGAVSNFDERLHPLLKNLGVYESFDFVLTSRECGSEKPEPHMFHEALKRAGSSGGGDGDGRGVIVGDTFRTDVLGARSVGWDAVLITRGKDPATEEEQDTTHYARVDDLRGVPAALG 314
BLAST of mRNA_L-elsbetiae_contig137.2817.1 vs. uniprot
Match: A0A8J5XU42_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XU42_DIALT) HSP 1 Score: 145 bits (366), Expect = 7.020e-35 Identity = 102/287 (35.54%), Postives = 140/287 (48.78%), Query Frame = 3 Query: 330 PEVLCLDCTGTIMRIKGSMPRLYLGVLEDRLGVPEGGLPDKVSESDLLD----------SFKTSLKQRSKELPCFGAGVMSSEDWWEEVVRATFRGAGVSDKTLGIDEGRNDNGGSGGIFDDVFGRLFHDVFTSTTAWELVPGAEEVLEDLRAW-CQEDGGPQALGAVSNFDERLHPLLKNLGVYDSFDFVLTSRECGSEKPNPGIFLEAAKLAGASGGDGGGRG-VLVGDTFRTDVLGARSVGWDAVLITRGKDPAGD-------DEREMDHVRVDNLRAVPAALG 1133 P ++ D TGT+MR++ + +Y L L + +S ++L +F + + PCFGAG +SS DWW VVR F GAGVS+ + + +F L+ F ST WEL+ + V++ L W Q G +G +SNFD+RL LL +LG+ FDFVLTSRE G EKP IF A++ AG + D R V VGDTF TDVLGA GW AV + D G+ E +H R+ +L VP +G Sbjct: 10 PRLVTFDATGTLMRVQRPVGAIYRDALISSLSASKLARTADLSAAELAACNVDPVAIGRAFGRAYAAQCAAHPCFGAGSLSSRDWWSSVVREAFVGAGVSEAVVRAE------------MPLLFPTLYES-FASTATWELLDASAGVVQQLARWRAQLPPGELTIGVISNFDDRLPALLNSLGLGRYFDFVLTSREHGDEKPCRSIFERASERAGLATVDVSPRTCVHVGDTFGTDVLGASRAGWRAVFVA-SDDALGELMPEAFVAMAETEHERIPSLGFVPRIVG 282
BLAST of mRNA_L-elsbetiae_contig137.2817.1 vs. uniprot
Match: A0A7S2PCP1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCP1_9STRA) HSP 1 Score: 142 bits (358), Expect = 3.330e-33 Identity = 90/239 (37.66%), Postives = 132/239 (55.23%), Query Frame = 3 Query: 330 PEVLCLDCTGTIMRIKGSMPRLYLGVLEDRLGVPEGGLPDKVSESDLLDSFKTSLKQRSKELPCFGAGV-MSSEDWWEEVVRATFRGAGVSDKTLGIDEGRNDNGGSGGIFDDVFGRLFHDVFTSTTAWELVPGAEEVLEDLRAWCQEDGGPQALGAVSNFDERLHPLLKNLGVYDSFDFVLTSRECGSEKPNPGIFLEAAKLAGASGGDGGGRGVLVGDTFRTDVLGARSVGWDAVLI 1043 P+++ D T T++++K + Y +L + LP + + +F + + +++ PCFG G+ M+S +WW E + T+ D G+ + R D G + D V L++ VF ST AWEL PG + L + W +E+GGPQ L +SNFDERLH +L +GV D+FDFVLTSRE GSEKPN F A AG + + VGD F +DV+GA + GW +V I Sbjct: 89 PQLITFDATDTLIQLKSEVGMTYRLILHEATRF-RSRLP---TPAVFTSAFNQAFTETNEKYPCFGCGLGMTSREWWAECTKRTYALVEHIDYERGLRD-RMD----GPLGDAVAEVLYNQVFASTEAWELKPGVLDALSRFKMW-REEGGPQ-LAVLSNFDERLHSILDQVGVADAFDFVLTSREIGSEKPNRSAFEVAMSRAGVADPS---LCMHVGDGFDSDVVGASNAGWHSVWI 313
BLAST of mRNA_L-elsbetiae_contig137.2817.1 vs. uniprot
Match: A0A7S2STH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STH1_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.890e-32 Identity = 93/243 (38.27%), Postives = 122/243 (50.21%), Query Frame = 3 Query: 330 PEVLCLDCTGTIMRIKGSMPRLYLGVLEDRLGVPEGGLPDKVSESDLLDS-FKTSLKQRSKELPCFGAGV-MSSEDWWEEVVRATFRGAGVSDKTLGIDEGRNDNGGSGGIFDDVFGRLFHDVFTSTTAWELVPGAEEVLE---DLRAWCQEDGGPQALGAVSNFDERLHPLLKNLGVYDSFDFVLTSRECGSEKPNPGIFLEAAKLAGASGGDGGGRGVLVGDTFRTDVLGARSVGWDAVLI 1043 P V+ D TGT+M++ + Y L G+ ++ D D+ FK K +S+E PCFG G M S DWW VVR T+ GV +K L + ++F L+ +VF + WEL A VL+ +L+ ED P LG +SNFDERLH LL NLG+ FD VLTS+EC EKPN IF A G R V +GDTF DV GA GW+A+ + Sbjct: 101 PRVVTFDATGTLMQLTEPVGMHYREALLQASGL-------RLPSPDHFDAAFKEVYKAQSEEFPCFGCGAAMPSRDWWYPVVRDTYLKTGVPEKILDP------------LLPEIFDSLYDNVFAGSEGWELNEQAIYVLDTLIELKESRAEDD-PLYLGVISNFDERLHKLLDNLGIAHYFDIVLTSKECCVEKPNSPIFDMALSRLGIYDRS---RAVHIGDTFDKDVAGAARAGWNAIFV 320
BLAST of mRNA_L-elsbetiae_contig137.2817.1 vs. uniprot
Match: A0A7S2G2K6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2K6_9STRA) HSP 1 Score: 138 bits (348), Expect = 3.390e-32 Identity = 87/247 (35.22%), Postives = 128/247 (51.82%), Query Frame = 3 Query: 330 PEVLCLDCTGTIMRIKGSMPRLYLGVLEDRLGVPEGGLPDKVSESDLL-DSFKTSLKQRSKELPCFGAG-VMSSEDWWEEVVRATFRGAGVSDKTLGIDEGRNDNGGSGGIFDDVFGRLFHDVFTSTTAWELVPGAEEVLEDLRAWCQEDGGPQALGAVSNFDERLHPLLKNLGVYDSFDFVLTSRECGSEKPNPGIFLEAAKLAGASGGDGGGRGVLVGDTFRTDVLGARSVGWDAVLITRGKDPA 1064 P+++ D TGT++++ + Y VL G+ ++ D+ D+FK + + PCFG +S++DWW VVR T+ GV + +F +F L+H+VFT T WEL VL+ L+ W + GP+ LG +SNFDERL LL+ LG+ D FD ++TS+ECG EKP IF A G D V VG+ + TDV GA + GW+A+ + K+PA Sbjct: 91 PQLITFDATGTLIQLAEPVGMHYRQVLMKHTGI-------RLPRPDIFTDAFKEVYDAKCQASPCFGCSDSISAQDWWASVVRDTYTKVGVPSDIIDP------------LFPLLFDELYHEVFTGTDGWELNADTMMVLDKLKEWQETGDGPR-LGVISNFDERLPKLLEALGIADYFDIIITSKECGMEKPCRQIFDIALTRLGIYERDAA---VHVGNDYDTDVKGATAAGWNALYV---KEPA 311
BLAST of mRNA_L-elsbetiae_contig137.2817.1 vs. uniprot
Match: A0A7R9U3B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3B9_9STRA) HSP 1 Score: 126 bits (316), Expect = 6.980e-27 Identity = 91/256 (35.55%), Postives = 130/256 (50.78%), Query Frame = 3 Query: 330 PEVLCLDCTGTIMRIKGSMPRLYLGVLEDRLGVPEGGLPDKVSESDLLDSFKTSLKQRSKELPCFGAGV-MSSEDWWEEVVRAT----FRGAGVSDKTLGIDEGRNDNGGSGGIFDDVFGRLFHDVFTSTTA-------WELVPGAEEVLEDLRAWCQEDGGPQALGAVSNFDERLHPLLKNLGVYDSFDFVLTSRECGSEKPNPGIFLEAAKLAGASGGDGGG----RGVL-VGDTFRTDVLGARSVGWDAVLIT 1046 P+++ D TGT+M+++ + +Y L + PD S + FK + + K +PCFG G ++S DWW V++ T F GV+D+ + G ++V LF D++ + A WEL PG E VL++LR+ E G LG +SNFD+RL +L++LG+ FDFVLTSRE G EKP+ +F A G S DG G R L GDT TDV GA GW + I+ Sbjct: 278 PKLITFDATGTLMQLRSHIGVIYRDTLLEHATTLRLPRPDVFSIA-----FKEAYASQCKAMPCFGCGSGIASFDWWRPVMQGTYDSVFSSFGVTDEEVAEAGGMESK-------EEVMEMLFQDLYFNIFAKGPPEGMWELRPGVEAVLQNLRS--AESCGGLRLGVLSNFDDRLPGILESLGIAKYFDFVLTSREAGQEKPSQVMFDLARNALGLS-ADGSGPIETRECLHAGDTLGTDVRGALDAGWQSAFIS 518
BLAST of mRNA_L-elsbetiae_contig137.2817.1 vs. uniprot
Match: A0A2P6N2V2_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N2V2_9EUKA) HSP 1 Score: 112 bits (281), Expect = 5.630e-24 Identity = 86/269 (31.97%), Postives = 131/269 (48.70%), Query Frame = 3 Query: 339 LCLDCTGTIMRIKGSMPRLYLGVLEDRLGV-----------------PEGGLPDKVS---ESDLLDSFKTSLKQRSKELPCFGA-GVMSSEDWWEEVVRATFRGAGVSDKTLGIDEGRNDNGGSGGIFDDVFGRLFHDVFTSTTAWELVPGAEEVLEDLRAWCQEDGGPQALGAVSNFDERLHPLLKNLGVYDSFDFVLTSRECGSEKPNPGIFLEAAKLAGASGGDGGGRGVLVGDTFRTDVLGARSVGWDAVLITRGKDPAGDDERE 1082 L D GT+ I+G + R Y R GV P G K + +L DSF + KQ + P FG+ + S+ WW+EVV T+RGA D +E + S ++ F+S ++L P + VL D+R ++G ++N DER+H +L++LG++ FDFVL SRE G KP+P I+ EA +L+ + VGD + D LGA+ +G +A+L+TRG+D ++ERE Sbjct: 9 LTFDGMGTLFEIRGGVGRFYAREAR-RHGVALRTEMSHKPERMFFKNPYDGTSTKQNIEAPDELRDSFYRAYKQADAKWPNFGSENNVESKQWWKEVVYNTYRGA---DYLTSKEEEETLSKMSDSLYSQ---------FSSVEGYKLFPETKAVLADVRERVD------SIGLITNTDERIHQVLESLGIHHLFDFVLCSREFGKRKPDPSIYTEACRLSKHHPSQV----MHVGDHYEKDFLGAKGIGMEALLVTRGQDM--EEERE 252
BLAST of mRNA_L-elsbetiae_contig137.2817.1 vs. uniprot
Match: UPI001EE526F1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE526F1) HSP 1 Score: 110 bits (275), Expect = 2.600e-23 Identity = 80/243 (32.92%), Postives = 121/243 (49.79%), Query Frame = 3 Query: 336 VLCLDCTGTIMRIKGSMPRLYLGVLEDRLGVPEGGLPDKVSESDLLDSFKTSLKQRSKELPCFGAGV-MSSEDWWEEVVRATFRGAGVSDKTLGIDEGRNDNGGSGGIFDDVFGRLFHDVFTSTTAWELVPGAEEVLEDLRAWCQEDGGPQALGAVSNFDERLHPLLKNLGVYDSFDFVLTSRECGSEKPNPGIFLEAAKLAGASGGDGGGRGVLVGDTFRTDVLGARSVGWDAVLITRGKDP 1061 ++ LD T T+++I GS Y V G K SD+ SFK +Q S+ P FG V MSS WW ++V+ F+ ++ + N + I + ++ H F++ AWE++PGAE +L+ L+A DG +GA+SNFD RL +L L + FDFV S + G EKP+ IF A L+ + V +GD++ D LGA +VG L+ +G +P Sbjct: 20 LVTLDVTNTLLKITGSPGHQYAAVA--------GIYGVKAKVSDINTSFKYRYRQYSERYPNFGTAVGMSSYKWWTDLVKDCFKSVADANVNSQVLPATNQDETLTQIANHLY---LH--FSTAKAWEILPGAEALLQSLKA----DG--VMIGAISNFDGRLEKILSCLALRHYFDFVTPSAKVGYEKPDRRIFEHALALSKIPASES----VHIGDSYEKDYLGAVNVGMTGYLVHKGSEP 239
BLAST of mRNA_L-elsbetiae_contig137.2817.1 vs. uniprot
Match: A0A8C4PXL1_EPTBU (Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4PXL1_EPTBU) HSP 1 Score: 108 bits (270), Expect = 7.500e-23 Identity = 84/267 (31.46%), Postives = 122/267 (45.69%), Query Frame = 3 Query: 348 DCTGTIMRIKGSMPRLYLGVLEDRLGVPEGGLPDKVSESDLLDSFKTSLKQRSKELPCFG---AGVMSSEDWWEEVVRATFRGAGVSDKTLGIDEGRNDNGGSGGIFDDVFGRLFHDVFTSTTAWELVPGAEEVLEDLRAWCQEDGGPQALGAVSNFDERLHPLLKNLGVYDSFDFVLTSRECGSEKPNPGIFLEAAKLAGASGGDGGGRGVLVGDTFRTDVLGARSVGWDAVLITRGKDPAGDDEREMDHVRVDNLRAVPAALGIV 1139 D TGT++R++GS+ Y G+ G +V+ L +F+ + +S+ PC+G AG + WW VV+ TF GV D L + + L+H++ WE+ L +WC+ G LG +SNFD+RL+ +L +G+ FDFVLTS E G++KP P +F A K G G V +GD TD LGA S G A L+ R K H +D+L +P L V Sbjct: 12 DATGTLLRVRGSVGEQYKAA-----GLLFGLASPRVTS--LNAAFREAYAHQSRLKPCYGSTCAGKSGANRWWASVVQETFNRCGVRDPPLIM---------------KIADYLYHEM-KRPDRWEVFGDVHPTL----SWCKTQGF--RLGVLSNFDKRLNDILSGVGLRSYFDFVLTSDEMGTQKPQPEVFHLALKHTGVQAGQA----VHIGDDPVTDYLGATSSGMAAFLLKRNKAAELKSILIPPHRILDSLDDLPPLLKAV 245
BLAST of mRNA_L-elsbetiae_contig137.2817.1 vs. uniprot
Match: A0A8D8W937_9HEMI (Rhythmically expressed gene 2 protein n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8W937_9HEMI) HSP 1 Score: 108 bits (270), Expect = 8.400e-23 Identity = 82/261 (31.42%), Postives = 127/261 (48.66%), Query Frame = 3 Query: 318 MSAPPEVLCLDCTGTIMRIKGSMPRLYLGVLEDRLGVPEGGLPDKVSESDLLDSFKTSLKQRSKELPCFGAGVMSSEDWWEEVVRATFRGAGVSDKTLGIDEGRNDNGGSGGIFDDVFGRLFHDV---FTSTTAWELVPGAEEVLEDLRAWCQEDGGPQALGAVSNFDERLHPLLKNLGVYDSFDFVLTSRECGSEKPNPGIFLEAAKLAGASGGDGGGRGVLVGDTFRTDVLGARSVGWDAVLITR--GKDPAGDDEREM 1085 MS +++ D TGT++R + + Y+ G G + ++ +++ +SF K + P FG+G + + WW VV + F E N G G + + + F+D+ ++ T W+L GA E+LE L + LG VSNFD RLH LLK + +Y F FV+TS E G KP+P IF A LA +S D + +GD F D A VGW+A+LI+ GK+ + +D ++ Sbjct: 1 MSCRFKLITFDVTGTLLRFRRTAGEQYV-----ETGKKFGHV---LNANEVQNSFVKHYKVYDRAYPNFGSGSIGWQQWWRNVVSSCFI------------ETYN---GPGQLSESDIDKFFNDLIKSYSDNTGWKLAEGATELLEMLHS------RNIMLGVVSNFDARLHNLLKEMKLYHYFKFVITSYESGLVKPDPKIFKLAESLASSSPSD---IKIHIGDNFDLDYKAALDVGWNALLISHAFGKNESENDSSDL 229 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig137.2817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig137.2817.1 >prot_L-elsbetiae_contig137.2817.1 ID=prot_L-elsbetiae_contig137.2817.1|Name=mRNA_L-elsbetiae_contig137.2817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp MGSRLAFAMGANSFPVHRHTPMHAKRLLTMSAPPEVLCLDCTGTIMRIKGback to top mRNA from alignment at L-elsbetiae_contig137:12193..16559- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig137.2817.1 ID=mRNA_L-elsbetiae_contig137.2817.1|Name=mRNA_L-elsbetiae_contig137.2817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4367bp|location=Sequence derived from alignment at L-elsbetiae_contig137:12193..16559- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig137:12193..16559- >mRNA_L-elsbetiae_contig137.2817.1 ID=mRNA_L-elsbetiae_contig137.2817.1|Name=mRNA_L-elsbetiae_contig137.2817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig137:12193..16559- (Laminarionema elsbetiae ELsaHSoW15)back to top |