mRNA_L-elsbetiae_contig1369.2803.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1369.2803.1 vs. uniprot
Match: A0A7S6U9X1_9STRA (Photosystem I reaction center subunit XI n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9X1_9STRA) HSP 1 Score: 244 bits (623), Expect = 5.330e-81 Identity = 122/150 (81.33%), Postives = 137/150 (91.33%), Query Frame = 1 Query: 1 MTSFIKSYNNDPFVGHLSTPITTSSTTKAFLNSLPIYRVGLSPLLKGLEIGMAHGYLIVGPFDKLGPLRDSEIAVLVGFLSSLGLLAILTVCLSMYGQVTFQDSNEVNNEILNNKDLLTRKNWNKFTSGFFIGSFGGASFAYLILLNLNL 450 MTSFIK YNNDPFVGHLSTP+TTS+TTKAFL SLPIYR GLSPLL+GLEIGMAHGYL+VGPFDKLGPLR+SEIA+L GFL+SLGL++ILT CL MYG+VTFQ+SNE+ + NKDLLT KNWN+FTSGFFIG+FGGASFAYLILLNL L Sbjct: 1 MTSFIKPYNNDPFVGHLSTPVTTSATTKAFLGSLPIYRSGLSPLLRGLEIGMAHGYLLVGPFDKLGPLRNSEIALLAGFLASLGLISILTTCLIMYGKVTFQESNEIKK--VANKDLLTGKNWNQFTSGFFIGAFGGASFAYLILLNLGL 148
BLAST of mRNA_L-elsbetiae_contig1369.2803.1 vs. uniprot
Match: A0A6G6D758_ECTSI (Photosystem I reaction center subunit XI n=36 Tax=Phaeophyceae TaxID=2870 RepID=A0A6G6D758_ECTSI) HSP 1 Score: 228 bits (580), Expect = 1.840e-74 Identity = 109/149 (73.15%), Postives = 133/149 (89.26%), Query Frame = 1 Query: 1 MTSFIKSYNNDPFVGHLSTPITTSSTTKAFLNSLPIYRVGLSPLLKGLEIGMAHGYLIVGPFDKLGPLRDSEIAVLVGFLSSLGLLAILTVCLSMYGQVTFQDSNEVNNEILNNKDLLTRKNWNKFTSGFFIGSFGGASFAYLILLNLN 447 MTSFIK YNNDP VGHLSTP+T+S+ TKA+L SLP YR GLSPLL+GLEIGMAHGYL++GPF+KLGPLR SEI++L+GFLSS+GL+ +LTVCL+MYG+VTFQ+S+ N+++N DLL KNWN+FTSGFF+GSFGG SFAYLILLNL+ Sbjct: 1 MTSFIKPYNNDPSVGHLSTPVTSSAATKAYLGSLPAYRKGLSPLLRGLEIGMAHGYLLLGPFEKLGPLRGSEISLLIGFLSSIGLITLLTVCLAMYGKVTFQESD---NDVVNKNDLLNGKNWNQFTSGFFVGSFGGVSFAYLILLNLD 146
BLAST of mRNA_L-elsbetiae_contig1369.2803.1 vs. uniprot
Match: A0A6B7EXU1_9PHAE (Photosystem I reaction center subunit XI n=2 Tax=Chordariaceae TaxID=66220 RepID=A0A6B7EXU1_9PHAE) HSP 1 Score: 226 bits (577), Expect = 5.090e-74 Identity = 112/149 (75.17%), Postives = 131/149 (87.92%), Query Frame = 1 Query: 1 MTSFIKSYNNDPFVGHLSTPITTSSTTKAFLNSLPIYRVGLSPLLKGLEIGMAHGYLIVGPFDKLGPLRDSEIAVLVGFLSSLGLLAILTVCLSMYGQVTFQDSNEVNNEILNNKDLLTRKNWNKFTSGFFIGSFGGASFAYLILLNLN 447 MTSFIK YNNDP VGHLSTP+T+S+ TKAFL SLP YR GLSPLL+GLEIGMAHGYL++GPF+KLGPLR SEIA+L+GFLSS+GL+ ILTVCL+MYG+VTFQ E +N+ N DLL+ KNWN+FTSGFF+GSFGG SFAYLILLNL+ Sbjct: 1 MTSFIKPYNNDPSVGHLSTPVTSSAATKAFLGSLPAYRKGLSPLLRGLEIGMAHGYLLLGPFEKLGPLRTSEIALLIGFLSSVGLVTILTVCLAMYGKVTFQ---EADNDSNNRNDLLSGKNWNQFTSGFFVGSFGGVSFAYLILLNLS 146
BLAST of mRNA_L-elsbetiae_contig1369.2803.1 vs. uniprot
Match: A0A8E5XRG2_9PHAE (Photosystem I reaction center subunit XI n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRG2_9PHAE) HSP 1 Score: 223 bits (568), Expect = 1.240e-72 Identity = 110/149 (73.83%), Postives = 130/149 (87.25%), Query Frame = 1 Query: 1 MTSFIKSYNNDPFVGHLSTPITTSSTTKAFLNSLPIYRVGLSPLLKGLEIGMAHGYLIVGPFDKLGPLRDSEIAVLVGFLSSLGLLAILTVCLSMYGQVTFQDSNEVNNEILNNKDLLTRKNWNKFTSGFFIGSFGGASFAYLILLNLN 447 MTSFIK YNNDP VGHLSTPIT S+ TKAFL +LP YR GLSPLL+GLEIGMAHGYL++GPFDKLGPLRDSE+++L GFLSS+GLL ILTVCL+MYG+VTFQ S +++ + N+ +L +NWN+FTSGFFIGSFGGA FAYLILLNL+ Sbjct: 1 MTSFIKPYNNDPSVGHLSTPITASAATKAFLGNLPAYRNGLSPLLRGLEIGMAHGYLLLGPFDKLGPLRDSEVSLLAGFLSSIGLLTILTVCLAMYGKVTFQRSEKISED---NQGVLGYRNWNRFTSGFFIGSFGGAGFAYLILLNLD 146
BLAST of mRNA_L-elsbetiae_contig1369.2803.1 vs. uniprot
Match: A0A1L2F1Y4_9PHAE (Photosystem I reaction center subunit XI n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1Y4_9PHAE) HSP 1 Score: 223 bits (567), Expect = 1.650e-72 Identity = 111/149 (74.50%), Postives = 129/149 (86.58%), Query Frame = 1 Query: 1 MTSFIKSYNNDPFVGHLSTPITTSSTTKAFLNSLPIYRVGLSPLLKGLEIGMAHGYLIVGPFDKLGPLRDSEIAVLVGFLSSLGLLAILTVCLSMYGQVTFQDSNEVNNEILNNKDLLTRKNWNKFTSGFFIGSFGGASFAYLILLNLN 447 MTSFIK YN+DP VGHLSTPIT+S+ TKA+L SLP YR GLSPLL+GLEIGMAHGYL++GPF+KLGPLR+SE+A L+GFLSS+GL+ ILTVCL+MYG+VTF DS+ N +LLT KNWN+FTSGFFIGSFGG SFAYLILLNLN Sbjct: 1 MTSFIKPYNDDPSVGHLSTPITSSAATKAYLASLPAYRKGLSPLLRGLEIGMAHGYLLLGPFEKLGPLRESELAPLIGFLSSVGLITILTVCLAMYGKVTFDDSDSTNTI-----ELLTSKNWNQFTSGFFIGSFGGVSFAYLILLNLN 144
BLAST of mRNA_L-elsbetiae_contig1369.2803.1 vs. uniprot
Match: A0A2R4QPZ7_9PHAE (Photosystem I reaction center subunit XI n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPZ7_9PHAE) HSP 1 Score: 221 bits (563), Expect = 6.690e-72 Identity = 106/149 (71.14%), Postives = 132/149 (88.59%), Query Frame = 1 Query: 1 MTSFIKSYNNDPFVGHLSTPITTSSTTKAFLNSLPIYRVGLSPLLKGLEIGMAHGYLIVGPFDKLGPLRDSEIAVLVGFLSSLGLLAILTVCLSMYGQVTFQDSNEVNNEILNNKDLLTRKNWNKFTSGFFIGSFGGASFAYLILLNLN 447 MTSFIK YN+DP VGHLSTPIT+S+ TKA+L SLP YR GLSPLL+GLEIGMAHGYL++GPF+KLGPLR+SE+++L+GFLSS+ L+ +LTVCL+MYG+VTF+DS +++N +LLT KNWN+FTSGFFIGSFGG SFAYLILLN++ Sbjct: 1 MTSFIKPYNDDPSVGHLSTPITSSAATKAYLASLPAYRKGLSPLLRGLEIGMAHGYLLLGPFEKLGPLRESELSLLIGFLSSVALVTLLTVCLAMYGKVTFEDS-----DVINTNELLTSKNWNQFTSGFFIGSFGGVSFAYLILLNID 144
BLAST of mRNA_L-elsbetiae_contig1369.2803.1 vs. uniprot
Match: A0A8F0JXT2_9PHAE (Photosystem I reaction center subunit XI n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JXT2_9PHAE) HSP 1 Score: 218 bits (554), Expect = 1.470e-70 Identity = 107/148 (72.30%), Postives = 128/148 (86.49%), Query Frame = 1 Query: 1 MTSFIKSYNNDPFVGHLSTPITTSSTTKAFLNSLPIYRVGLSPLLKGLEIGMAHGYLIVGPFDKLGPLRDSEIAVLVGFLSSLGLLAILTVCLSMYGQVTFQDSNEVNNEILNNKDLLTRKNWNKFTSGFFIGSFGGASFAYLILLNL 444 MTSFIK +N+DP VGHLSTP+T+S+ TKA+L++LP YR GLSPLL+G+EIGMAHGYL+VGPF KLGPLRDSEI++LVGFLSS+ L+ +LT+CL MYG+VTFQ+ +EVN DLL KNWN+FTSGF IGSFGGASFAYLILLNL Sbjct: 1 MTSFIKPFNDDPSVGHLSTPVTSSAATKAYLSNLPAYRKGLSPLLRGIEIGMAHGYLLVGPFQKLGPLRDSEISLLVGFLSSIALVTLLTICLVMYGKVTFQEYDEVNEN-----DLLNSKNWNRFTSGFLIGSFGGASFAYLILLNL 143
BLAST of mRNA_L-elsbetiae_contig1369.2803.1 vs. uniprot
Match: A0A2I4Q2H3_9PHAE (Photosystem I reaction center subunit XI n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2H3_9PHAE) HSP 1 Score: 209 bits (532), Expect = 3.640e-67 Identity = 102/150 (68.00%), Postives = 131/150 (87.33%), Query Frame = 1 Query: 1 MTSFIKSYNNDPFVGHLSTPITTSSTTKAFLNSLPIYRVGLSPLLKGLEIGMAHGYLIVGPFDKLGPLRDSEIAVLVGFLSSLGLLAILTVCLSMYGQVTFQDSNEVNNEILNNKDLLTRKNWNKFTSGFFIGSFGGASFAYLILLNLNL 450 M SFI+ +N+DP VGHLSTPIT+S+ TKA+L++LP YR GLSPLL+GLE+GMAHGYL++GPF KLGPLR+SEI++LVGFLS+ L++ILT+CL+MYG+VTFQDS++ +++ DLLT NW++FTSGFFIG+FGG SFAYLILLNL L Sbjct: 1 MISFIRPFNDDPSVGHLSTPITSSAATKAYLSNLPAYRKGLSPLLRGLEVGMAHGYLLLGPFAKLGPLRESEISLLVGFLSASALISILTICLAMYGKVTFQDSSKD----ISSNDLLTSTNWSRFTSGFFIGAFGGISFAYLILLNLEL 146
BLAST of mRNA_L-elsbetiae_contig1369.2803.1 vs. uniprot
Match: B7T210_VAULI (Photosystem I reaction center subunit XI n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T210_VAULI) HSP 1 Score: 203 bits (516), Expect = 1.100e-64 Identity = 97/149 (65.10%), Postives = 126/149 (84.56%), Query Frame = 1 Query: 1 MTSFIKSYNNDPFVGHLSTPITTSSTTKAFLNSLPIYRVGLSPLLKGLEIGMAHGYLIVGPFDKLGPLRDSEIAVLVGFLSSLGLLAILTVCLSMYGQVTFQDSNEVNNEILNNKDLLTRKNWNKFTSGFFIGSFGGASFAYLILLNLN 447 M +FIK YNNDPFVGHLSTPITTS TK FL +LPIYR LSPL +GLE+GMAHGYL+VGPF+KLGPLR+SE+A+L GF+S+LGL+ IL +CL +YG+ +FQ+S + + +I N +DLLT++ W++FTSGF +G+FGGA FAYL+LLN+ Sbjct: 1 MANFIKPYNNDPFVGHLSTPITTSLITKTFLGNLPIYRENLSPLFRGLEVGMAHGYLLVGPFEKLGPLRNSEVALLSGFVSALGLIIILVLCLVIYGKASFQESPKASLKITN-QDLLTKEGWSQFTSGFSVGAFGGAGFAYLLLLNIT 148
BLAST of mRNA_L-elsbetiae_contig1369.2803.1 vs. uniprot
Match: A0A1Z1MSL9_9FLOR (Photosystem I reaction center subunit XI n=6 Tax=Rhodomelaceae TaxID=2803 RepID=A0A1Z1MSL9_9FLOR) HSP 1 Score: 192 bits (488), Expect = 2.210e-60 Identity = 93/148 (62.84%), Postives = 122/148 (82.43%), Query Frame = 1 Query: 1 MTSFIKSYNNDPFVGHLSTPITTSSTTKAFLNSLPIYRVGLSPLLKGLEIGMAHGYLIVGPFDKLGPLRDSEIAVLVGFLSSLGLLAILTVCLSMYGQVTFQDSNEVNNEILNNKDLLTRKNWNKFTSGFFIGSFGGASFAYLILLNL 444 MT+FIK YN DPFVG+LSTPI+TSS TK+ L++LP YR GLSPLL+GLEIGMAHGY ++GPFDKLGPLR+++IA+L GFLS++GL+ ILT CLSMYG VTF ++++ + +I L T W++FT+GFF+G+ GG+ FAYL+L NL Sbjct: 1 MTNFIKPYNRDPFVGNLSTPISTSSLTKSLLSNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLGPLRNTDIALLSGFLSAVGLIVILTACLSMYGSVTFSNNSDESKDI-----LQTSGGWSQFTAGFFVGAVGGSGFAYLLLANL 143 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1369.2803.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1369.2803.1 >prot_L-elsbetiae_contig1369.2803.1 ID=prot_L-elsbetiae_contig1369.2803.1|Name=mRNA_L-elsbetiae_contig1369.2803.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=151bp MTSFIKSYNNDPFVGHLSTPITTSSTTKAFLNSLPIYRVGLSPLLKGLEIback to top mRNA from alignment at L-elsbetiae_contig1369:3117..3569- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1369.2803.1 ID=mRNA_L-elsbetiae_contig1369.2803.1|Name=mRNA_L-elsbetiae_contig1369.2803.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=453bp|location=Sequence derived from alignment at L-elsbetiae_contig1369:3117..3569- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1369:3117..3569- >mRNA_L-elsbetiae_contig1369.2803.1 ID=mRNA_L-elsbetiae_contig1369.2803.1|Name=mRNA_L-elsbetiae_contig1369.2803.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=906bp|location=Sequence derived from alignment at L-elsbetiae_contig1369:3117..3569- (Laminarionema elsbetiae ELsaHSoW15)back to top |