mRNA_L-elsbetiae_contig13683.2796.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: D7G0F5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0F5_ECTSI) HSP 1 Score: 196 bits (499), Expect = 5.690e-56 Identity = 99/115 (86.09%), Postives = 103/115 (89.57%), Query Frame = 1 Query: 1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 345 RCV L R GP MVQEAAVALVSAAAE +DEDFGR+YD VMPFL+QILSSC G EQRLLRGK LECVSLVG T GKERFGVDALSVMQLMVQAQA+GLDDDDPTRVYMLRAWVRI Sbjct: 666 RCVMLIRQGPVMVQEAAVALVSAAAEAAEDEDFGRFYDVVMPFLLQILSSCPGQEQRLLRGKTLECVSLVGATAGKERFGVDALSVMQLMVQAQASGLDDDDPTRVYMLRAWVRI 780
BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A096P937_OSTTA (Armadillo-type fold n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P937_OSTTA) HSP 1 Score: 114 bits (285), Expect = 3.930e-27 Identity = 55/115 (47.83%), Postives = 80/115 (69.57%), Query Frame = 1 Query: 1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 345 + + L ++G VQEAA+ +++ A+ Q E F +YYD V+PFL IL++ G E R+LR KA+EC+SLVG VG+ RF DA +MQ+++Q Q+ G +DDDPT YML+AW R+ Sbjct: 503 KLMTLLQSGNKSVQEAALTALASTADNAQ-ESFVKYYDVVLPFLKAILTNANGKEYRMLRAKAVECISLVGMAVGRARFAADAREIMQMLMQLQSGGFEDDDPTVQYMLQAWTRL 616
BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A1Y5I6V1_OSTTA (TOG domain-containing protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5I6V1_OSTTA) HSP 1 Score: 114 bits (285), Expect = 3.990e-27 Identity = 55/115 (47.83%), Postives = 80/115 (69.57%), Query Frame = 1 Query: 1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 345 + + L ++G VQEAA+ +++ A+ Q E F +YYD V+PFL IL++ G E R+LR KA+EC+SLVG VG+ RF DA +MQ+++Q Q+ G +DDDPT YML+AW R+ Sbjct: 1214 KLMTLLQSGNKSVQEAALTALASTADNAQ-ESFVKYYDVVLPFLKAILTNANGKEYRMLRAKAVECISLVGMAVGRARFAADAREIMQMLMQLQSGGFEDDDPTVQYMLQAWTRL 1327
BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: K8F2S5_9CHLO (TOG domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F2S5_9CHLO) HSP 1 Score: 112 bits (281), Expect = 1.360e-26 Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 345 + + L RAG +VQE+A+ +++ A+T Q E F +YYD V+P L +I+ S + R+LR KA+ECV+LVG VGK+RF DA+ VM +M Q QANG D DD T YML+AW R+ Sbjct: 531 KLLSLLRAGNKVVQESALTALASTADTAQ-ETFSKYYDHVVPLLKEIIVSANTPDYRMLRAKAIECVTLVGMAVGKQRFSGDAIEVMNIMQQLQANGFDADDQTTSYMLQAWTRV 644
BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A6U3FEM6_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A6U3FEM6_9CHLO) HSP 1 Score: 112 bits (279), Expect = 2.520e-26 Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 1 Query: 1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 345 + +++ + G MVQEAA+ +++ A+ Q E F +YY V+PFL QIL + G + R+LR KA+EC+SLVG VGKERF DA VM +++Q QA G +DDD T YM +AW R+ Sbjct: 432 KLLQMLQGGHRMVQEAALTALASTADNAQ-EAFAKYYGTVLPFLKQILVAAAGKDHRMLRAKAVECISLVGMAVGKERFASDAKEVMDMLMQLQAGGFEDDDATISYMQQAWTRL 545
BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A2P6VKC1_9CHLO (ARM repeat-containing n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VKC1_9CHLO) HSP 1 Score: 111 bits (278), Expect = 3.450e-26 Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 345 + + L + G VQE A+ ++A A+T + E F +YYD+ MP + IL+ G EQ+LLR KALECVSLVG VGKERFG DA VMQ M Q QA GLD DDP YML+A RI Sbjct: 498 KLLALLQRGRRNVQEGALTAIAAVADTAE-EYFIKYYDSCMPLMTSILTHASGKEQQLLRAKALECVSLVGLAVGKERFGPDAQGVMQYMQQVQAAGLDSDDPLSSYMLQAGARI 611
BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: C1E2M8_MICCC (TOG domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E2M8_MICCC) HSP 1 Score: 110 bits (275), Expect = 8.770e-26 Identity = 54/115 (46.96%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 345 + +++ + G MVQE+A+ +++ A+ Q F +YY V+PFL QIL G E R+LR KA+EC+SLVG VGKE+F DA VM L++Q QA G +DDD T YM +AW R+ Sbjct: 488 KLLQMLQGGHRMVQESALTALASVADNAQTA-FAKYYSTVLPFLKQILVGAAGKEHRMLRAKAMECISLVGMAVGKEQFAPDAREVMDLLMQLQAGGFEDDDTTASYMQQAWTRL 601
BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A7S0WCT2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WCT2_9CHLO) HSP 1 Score: 109 bits (273), Expect = 1.020e-25 Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 1 Query: 1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 345 + + L +AG VQEAA+ +++ A+ Q E F +YYD V+P+L IL + G+E R+LR KA+EC+SLVG VG+ RF DA VM L++Q Q+ G +DDD T YML+AW R+ Sbjct: 53 KLLTLLQAGNKSVQEAALTALASTADNAQ-ESFVKYYDVVLPYLKNILINANGSEYRMLRAKAVECISLVGMAVGRTRFSQDAREVMNLLMQLQSGGFEDDDQTVQYMLQAWTRL 166
BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A2P6U5C3_CHLSO (ARM repeat-containing isoform B n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U5C3_CHLSO) HSP 1 Score: 110 bits (274), Expect = 1.200e-25 Identity = 61/115 (53.04%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 345 + + L + G VQEAA+ ++A A+T + E F +YYD+ MP + IL+ G E +LLR KALECVSLVG VGKERFG DA VMQ M Q QA G+D DDP YML+A RI Sbjct: 524 KLLALLQRGRRNVQEAALTAIAAVADTAE-EYFIKYYDSCMPLMTSILTHASGKEMQLLRAKALECVSLVGLAVGKERFGNDAKGVMQYMQQVQAAGIDSDDPLASYMLQAGARI 637
BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A7S0KHC6_9CHLO (Hypothetical protein (Fragment) n=3 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KHC6_9CHLO) HSP 1 Score: 109 bits (273), Expect = 1.510e-25 Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 1 Query: 1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 345 + + L +AG VQEAA+ +++ A+ Q E F +YYD V+P+L IL + G+E R+LR KA+EC+SLVG VG+ RF DA VM L++Q Q+ G +DDD T YML+AW R+ Sbjct: 500 KLLTLLQAGNKSVQEAALTALASTADNAQ-ESFVKYYDVVLPYLKNILINANGSEYRMLRAKAVECISLVGMAVGRTRFSQDAREVMNLLMQLQSGGFEDDDQTVQYMLQAWTRL 613 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13683.2796.1 >prot_L-elsbetiae_contig13683.2796.1 ID=prot_L-elsbetiae_contig13683.2796.1|Name=mRNA_L-elsbetiae_contig13683.2796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSback to top mRNA from alignment at L-elsbetiae_contig13683:643..2583- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13683.2796.1 ID=mRNA_L-elsbetiae_contig13683.2796.1|Name=mRNA_L-elsbetiae_contig13683.2796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1941bp|location=Sequence derived from alignment at L-elsbetiae_contig13683:643..2583- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13683:643..2583- >mRNA_L-elsbetiae_contig13683.2796.1 ID=mRNA_L-elsbetiae_contig13683.2796.1|Name=mRNA_L-elsbetiae_contig13683.2796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=702bp|location=Sequence derived from alignment at L-elsbetiae_contig13683:643..2583- (Laminarionema elsbetiae ELsaHSoW15)back to top |