prot_L-elsbetiae_contig13683.2796.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig13683.2796.1
Unique Name	prot_L-elsbetiae_contig13683.2796.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	117

Homology

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BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: D7G0F5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0F5_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 5.690e-56
Identity = 99/115 (86.09%), Postives = 103/115 (89.57%), Query Frame = 0

Query:    1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 115
            RCV L R GP MVQEAAVALVSAAAE  +DEDFGR+YD VMPFL+QILSSC G EQRLLRGK LECVSLVG T GKERFGVDALSVMQLMVQAQA+GLDDDDPTRVYMLRAWVRI
Sbjct:  666 RCVMLIRQGPVMVQEAAVALVSAAAEAAEDEDFGRFYDVVMPFLLQILSSCPGQEQRLLRGKTLECVSLVGATAGKERFGVDALSVMQLMVQAQASGLDDDDPTRVYMLRAWVRI 780

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BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A096P937_OSTTA (Armadillo-type fold n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P937_OSTTA)

HSP 1 Score: 114 bits (285), Expect = 3.930e-27
Identity = 55/115 (47.83%), Postives = 80/115 (69.57%), Query Frame = 0

Query:    1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 115
            + + L ++G   VQEAA+  +++ A+  Q E F +YYD V+PFL  IL++  G E R+LR KA+EC+SLVG  VG+ RF  DA  +MQ+++Q Q+ G +DDDPT  YML+AW R+
Sbjct:  503 KLMTLLQSGNKSVQEAALTALASTADNAQ-ESFVKYYDVVLPFLKAILTNANGKEYRMLRAKAVECISLVGMAVGRARFAADAREIMQMLMQLQSGGFEDDDPTVQYMLQAWTRL 616

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BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A1Y5I6V1_OSTTA (TOG domain-containing protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5I6V1_OSTTA)

HSP 1 Score: 114 bits (285), Expect = 3.990e-27
Identity = 55/115 (47.83%), Postives = 80/115 (69.57%), Query Frame = 0

Query:    1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 115
            + + L ++G   VQEAA+  +++ A+  Q E F +YYD V+PFL  IL++  G E R+LR KA+EC+SLVG  VG+ RF  DA  +MQ+++Q Q+ G +DDDPT  YML+AW R+
Sbjct: 1214 KLMTLLQSGNKSVQEAALTALASTADNAQ-ESFVKYYDVVLPFLKAILTNANGKEYRMLRAKAVECISLVGMAVGRARFAADAREIMQMLMQLQSGGFEDDDPTVQYMLQAWTRL 1327

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BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: K8F2S5_9CHLO (TOG domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F2S5_9CHLO)

HSP 1 Score: 112 bits (281), Expect = 1.360e-26
Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 0

Query:    1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 115
            + + L RAG  +VQE+A+  +++ A+T Q E F +YYD V+P L +I+ S    + R+LR KA+ECV+LVG  VGK+RF  DA+ VM +M Q QANG D DD T  YML+AW R+
Sbjct:  531 KLLSLLRAGNKVVQESALTALASTADTAQ-ETFSKYYDHVVPLLKEIIVSANTPDYRMLRAKAIECVTLVGMAVGKQRFSGDAIEVMNIMQQLQANGFDADDQTTSYMLQAWTRV 644

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BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A6U3FEM6_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A6U3FEM6_9CHLO)

HSP 1 Score: 112 bits (279), Expect = 2.520e-26
Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 0

Query:    1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 115
            + +++ + G  MVQEAA+  +++ A+  Q E F +YY  V+PFL QIL +  G + R+LR KA+EC+SLVG  VGKERF  DA  VM +++Q QA G +DDD T  YM +AW R+
Sbjct:  432 KLLQMLQGGHRMVQEAALTALASTADNAQ-EAFAKYYGTVLPFLKQILVAAAGKDHRMLRAKAVECISLVGMAVGKERFASDAKEVMDMLMQLQAGGFEDDDATISYMQQAWTRL 545

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BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A2P6VKC1_9CHLO (ARM repeat-containing n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VKC1_9CHLO)

HSP 1 Score: 111 bits (278), Expect = 3.450e-26
Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 0

Query:    1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 115
            + + L + G   VQE A+  ++A A+T + E F +YYD+ MP +  IL+   G EQ+LLR KALECVSLVG  VGKERFG DA  VMQ M Q QA GLD DDP   YML+A  RI
Sbjct:  498 KLLALLQRGRRNVQEGALTAIAAVADTAE-EYFIKYYDSCMPLMTSILTHASGKEQQLLRAKALECVSLVGLAVGKERFGPDAQGVMQYMQQVQAAGLDSDDPLSSYMLQAGARI 611

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BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: C1E2M8_MICCC (TOG domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E2M8_MICCC)

HSP 1 Score: 110 bits (275), Expect = 8.770e-26
Identity = 54/115 (46.96%), Postives = 76/115 (66.09%), Query Frame = 0

Query:    1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 115
            + +++ + G  MVQE+A+  +++ A+  Q   F +YY  V+PFL QIL    G E R+LR KA+EC+SLVG  VGKE+F  DA  VM L++Q QA G +DDD T  YM +AW R+
Sbjct:  488 KLLQMLQGGHRMVQESALTALASVADNAQTA-FAKYYSTVLPFLKQILVGAAGKEHRMLRAKAMECISLVGMAVGKEQFAPDAREVMDLLMQLQAGGFEDDDTTASYMQQAWTRL 601

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BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A7S0WCT2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WCT2_9CHLO)

HSP 1 Score: 109 bits (273), Expect = 1.020e-25
Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 0

Query:    1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 115
            + + L +AG   VQEAA+  +++ A+  Q E F +YYD V+P+L  IL +  G+E R+LR KA+EC+SLVG  VG+ RF  DA  VM L++Q Q+ G +DDD T  YML+AW R+
Sbjct:   53 KLLTLLQAGNKSVQEAALTALASTADNAQ-ESFVKYYDVVLPYLKNILINANGSEYRMLRAKAVECISLVGMAVGRTRFSQDAREVMNLLMQLQSGGFEDDDQTVQYMLQAWTRL 166

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BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A2P6U5C3_CHLSO (ARM repeat-containing isoform B n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U5C3_CHLSO)

HSP 1 Score: 110 bits (274), Expect = 1.200e-25
Identity = 61/115 (53.04%), Postives = 76/115 (66.09%), Query Frame = 0

Query:    1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 115
            + + L + G   VQEAA+  ++A A+T + E F +YYD+ MP +  IL+   G E +LLR KALECVSLVG  VGKERFG DA  VMQ M Q QA G+D DDP   YML+A  RI
Sbjct:  524 KLLALLQRGRRNVQEAALTAIAAVADTAE-EYFIKYYDSCMPLMTSILTHASGKEMQLLRAKALECVSLVGLAVGKERFGNDAKGVMQYMQQVQAAGIDSDDPLASYMLQAGARI 637

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BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Match: A0A7S0KHC6_9CHLO (Hypothetical protein (Fragment) n=3 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KHC6_9CHLO)

HSP 1 Score: 109 bits (273), Expect = 1.510e-25
Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 0

Query:    1 RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSSCVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDDDDPTRVYMLRAWVRI 115
            + + L +AG   VQEAA+  +++ A+  Q E F +YYD V+P+L  IL +  G+E R+LR KA+EC+SLVG  VG+ RF  DA  VM L++Q Q+ G +DDD T  YML+AW R+
Sbjct:  500 KLLTLLQAGNKSVQEAALTALASTADNAQ-ESFVKYYDVVLPYLKNILINANGSEYRMLRAKAVECISLVGMAVGRTRFSQDAREVMNLLMQLQSGGFEDDDQTVQYMLQAWTRL 613

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig13683.2796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G0F5_ECTSI	5.690e-56	86.09	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A096P937_OSTTA	3.930e-27	47.83	Armadillo-type fold n=1 Tax=Ostreococcus tauri Tax...	[more]
A0A1Y5I6V1_OSTTA	3.990e-27	47.83	TOG domain-containing protein n=1 Tax=Ostreococcus...	[more]
K8F2S5_9CHLO	1.360e-26	49.57	TOG domain-containing protein n=1 Tax=Bathycoccus ...	[more]
A0A6U3FEM6_9CHLO	2.520e-26	47.83	Hypothetical protein n=1 Tax=Mantoniella antarctic...	[more]
A0A2P6VKC1_9CHLO	3.450e-26	53.91	ARM repeat-containing n=1 Tax=Micractinium conduct...	[more]
C1E2M8_MICCC	8.770e-26	46.96	TOG domain-containing protein n=2 Tax=Micromonas T...	[more]
A0A7S0WCT2_9CHLO	1.020e-25	47.83	Hypothetical protein (Fragment) n=1 Tax=Ostreococc...	[more]
A0A2P6U5C3_CHLSO	1.200e-25	53.04	ARM repeat-containing isoform B n=2 Tax=Chlorella ...	[more]
A0A7S0KHC6_9CHLO	1.510e-25	47.83	Hypothetical protein (Fragment) n=3 Tax=Ostreococc...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..116 e-value: 5.3E-34 score: 119.4
None	No IPR available	PANTHER	PTHR10527:SF5	KARYOPHERIN (IMPORTIN) BETA 3	coord: 6..115
IPR040122	Importin beta family	PANTHER	PTHR10527	IMPORTIN BETA	coord: 6..115
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 5..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig13683	contig	L-elsbetiae_contig13683:643..2583 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig13683.2796.1	mRNA_L-elsbetiae_contig13683.2796.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig13683 643..2583 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig13683.2796.1 ID=prot_L-elsbetiae_contig13683.2796.1|Name=mRNA_L-elsbetiae_contig13683.2796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp
RCVRLTRAGPPMVQEAAVALVSAAAETCQDEDFGRYYDAVMPFLMQILSS
CVGAEQRLLRGKALECVSLVGGTVGKERFGVDALSVMQLMVQAQANGLDD
DDPTRVYMLRAWVRIW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR040122	Importin_beta
IPR016024	ARM-type_fold