mRNA_L-elsbetiae_contig13614.2752.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13614.2752.1 vs. uniprot
Match: A0A6H5JMU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMU0_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 8.810e-18 Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 2 Query: 2 CTPNPLMYRVVDKSKYKLGESEIKSMLDGSSTYVTTTRGRDEFIAEYGSQTLEIKTLRQERETELQAGHHRSMFRDELLVLDALRGHPNIVALLGFTSTAMVTEYSPNNVQQAI 343 C NPL R+V+ + YK G EI+ M G ++ T R R ++ Y +T+ +KTL+ E + H SM R E+L LDALRG P+IV +LGF T +VTEY +N I Sbjct: 143 CDRNPLWERMVNPANYKFGCKEIEEMFSGDMAFIGTGRIRTVYMVNYQGETVVVKTLQHVEELRREKAHL-SMHRREVLTLDALRGQPHIVGMLGFCQTTVVTEYHSDNFLSTI 255
BLAST of mRNA_L-elsbetiae_contig13614.2752.1 vs. uniprot
Match: D7FNX1_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX1_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 9.790e-17 Identity = 49/115 (42.61%), Postives = 66/115 (57.39%), Query Frame = 2 Query: 2 CTPNPLMYRVVDKSKYKLGESEIKSMLDGSSTYVTTTRGRDEFIAEYGSQTLEIKTLRQERETE-LQAGHHRSMFRDELLVLDALRGHPNIVALLGFTSTAMVTEYSPNNVQQAI 343 C NPL + + + YK G EI+ ML G T + T R R + EY + + +KTL+ E L+A H M R E L L+ALRGHPN+V +LGF +T +VTEY P+N I Sbjct: 75 CDRNPLWEKQPNPANYKFGCQEIERMLSGEMTLIGTGRVRTVHMVEYEGEAVVVKTLQHVEELRRLKA--HLEMHRVESLTLEALRGHPNVVGMLGFCNTTVVTEYHPDNFLHTI 187
BLAST of mRNA_L-elsbetiae_contig13614.2752.1 vs. uniprot
Match: A0A6H5J7B7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7B7_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 4.440e-14 Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 2 Query: 2 CTPNPLMYRVVDKSKYKLGESEIKSMLDGSSTYVTTTRGRDEFIAEYGSQTLEIKTLRQERETELQAGHHRSMFRDELLVLDALRGHPNIVALLGFTSTAMVTEYSPNNVQQAIL 346 C +PL +VVD+S Y+ G EI+ M++G T + RD ++ E G + L +K LR++ E + R E +DA+RGHPN+V +LG + V+EY P + +L Sbjct: 221 CLRSPLWDKVVDESNYEFGCDEIEEMMEGKKTLIGNGNIRDVYLVERGGRNLVVKYLREDFEQRATRTRVERIHRWEAAAIDAVRGHPNVVDMLGICGPSSVSEYFPVRLDDLVL 335
BLAST of mRNA_L-elsbetiae_contig13614.2752.1 vs. uniprot
Match: A0A6H5LAH0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAH0_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 9.290e-14 Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 2 CTPNPLMYRVVDKSKYKLGESEIKSMLDGSSTYVTTTRGRDEFIAEYGSQTLEIKTLRQERETELQAGHHRSMFRDELLVLDALRGHPNIVALLGFTSTAMVTEYSPNNVQQAILDR 352 C NPL R+VD ++YK G EI +M+ + + RD ++ EY Q L +KTLR E Q + +M + E+L +DAL+GHPNIV +LG T +VT++ + + +I R Sbjct: 90 CRRNPLHERIVDPAEYKYGCKEIHNMIRREHALLASGLVRDVYLVEYEGQALVVKTLRNVDELRKQK-LYLTMHKREVLTMDALKGHPNIVDMLGVCGTTVVTKFFKEDFKGSIRRR 205
BLAST of mRNA_L-elsbetiae_contig13614.2752.1 vs. uniprot
Match: A0A6H5L434_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L434_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 1.770e-13 Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 2 CTPNPLMYRVVDKSKYKLGESEIKSMLDGSSTYVTTTRGRDEFIAEYGSQTLEIKTLRQERETELQAGHHRS--MFRDELLVLDALRGHPNIVALLGFTSTAMVTEYSPNNVQQAIL 346 C P+PL + VD SK++ G EI+SML + RD ++ E+G + L +K LR++ EL+A R+ + R E LD +RGHPNIV +LG ++ V+E+ P+ + +L Sbjct: 196 CLPSPLCEKRVDPSKFEFGCEEIESMLADEKKLIGHGNIRDVYLVEWGGRKLVVKALRED--FELRASRRRADKIHRWEATALDEVRGHPNIVDMLGLCESSSVSEFFPSRLDDLVL 310
BLAST of mRNA_L-elsbetiae_contig13614.2752.1 vs. uniprot
Match: A0A6H5JU33_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU33_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 3.670e-11 Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 68 IKSMLDGSSTYVTTTRGRDEFIAEYGSQTLEIKTLRQERETE-LQAGHHRSMFRDELLVLDALRGHPNIVALLGFTSTAMVTEYSPNNVQQAI 343 ++ ML G T + T R R + EY + + +KTL+ E L+A H M R E L L+ALRGHPN+V ++GF +T +VTEY P N AI Sbjct: 4 VQRMLSGEMTLIGTGRVRTVHMVEYEGEAVVVKTLQHVEELRRLKA--HLEMHRVESLTLEALRGHPNVVGMVGFCNTTVVTEYHPYNFLHAI 94
BLAST of mRNA_L-elsbetiae_contig13614.2752.1 vs. uniprot
Match: D7G7W7_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W7_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 4.370e-9 Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 71 KSMLDGSSTYVTTTRGRDEFIAEYGSQTLEIKTLRQERETELQAGHHRSMFRDELLVLDALRGHPNIVALLGFTSTAMVTEYSPNNVQQAI 343 ++ML G++T V R RD ++ EY + + +KTLR ++ Q H R E+L LDA+RGH NIV +LG T +VTEY + +AI Sbjct: 21 QNMLAGNTTLVGNGRVRDVYLVEYEGRKVALKTLRNMDDSRSQRVHLEKHKR-EILTLDAMRGHRNIVGMLGLCDTMVVTEYYTTSFLRAI 110
BLAST of mRNA_L-elsbetiae_contig13614.2752.1 vs. uniprot
Match: A0A6H5K7R0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R0_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 2.770e-8 Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 77 MLDGSSTYVTTTRGRDEFIAEYGSQTLEIKTLRQERETELQAGHHRSMFRDELLVLDALRGHPNIVALLGFTSTAMVTEYSPNNVQQAI 343 ML G+ T V R RD ++ EY + + +KTLR + + H R E+L LDA+RGH NIV +LGF T +VTEY + +AI Sbjct: 165 MLAGNKTLVGNGRVRDVYLVEYEGRKVALKTLRNMDDGRSKKVHLMKHKR-EILTLDAMRGHRNIVGMLGFCDTMVVTEYYTTSFLRAI 252
BLAST of mRNA_L-elsbetiae_contig13614.2752.1 vs. uniprot
Match: D8LN73_ECTSI (Serine/threonine/tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN73_ECTSI) HSP 1 Score: 55.5 bits (132), Expect = 1.230e-6 Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = 2 Query: 77 MLDGSSTYVTTTRGRDEFIAEYGSQTLEIKTLRQERETELQAGHHRSMFRDELLVLDALRGHPNIVALLGFTSTAMVTEYSPNNVQQAILDR 352 M+ T + + RD ++ EY Q L +KTLR E Q + +M + E+L +DAL+GHPNIV +LG T +VT++ + + +I R Sbjct: 1 MIRREQTLLASGLVRDVYLVEYEGQALVVKTLRNVDELRKQK-LYLTMHKREVLTMDALKGHPNIVEMLGVCGTTVVTKFFKEDFKGSIRRR 91
BLAST of mRNA_L-elsbetiae_contig13614.2752.1 vs. uniprot
Match: D8LN76_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN76_ECTSI) HSP 1 Score: 54.7 bits (130), Expect = 2.080e-6 Identity = 30/71 (42.25%), Postives = 41/71 (57.75%), Query Frame = 2 Query: 131 IAEYGSQTLEIKTLRQERETELQAGHHRSMFRDELLVLDALRGHPNIVALLGFTSTAMVTEYSPNNVQQAI 343 + Y + + +KTL+ E + H SM R E+L LDALRG P+IV +LGF T +VTEY +N I Sbjct: 1 MVNYQGENVVVKTLQHVEELRREKAHL-SMHRREVLTLDALRGQPHIVGMLGFCQTTVVTEYHSDNFLSTI 70 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13614.2752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13614.2752.1 >prot_L-elsbetiae_contig13614.2752.1 ID=prot_L-elsbetiae_contig13614.2752.1|Name=mRNA_L-elsbetiae_contig13614.2752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=118bp MHTKPTDVPGGGQIQVQARRIRNQEHAGRQQHVCDYYQRPRRVHSRIREPback to top mRNA from alignment at L-elsbetiae_contig13614:1636..2828+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13614.2752.1 ID=mRNA_L-elsbetiae_contig13614.2752.1|Name=mRNA_L-elsbetiae_contig13614.2752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1193bp|location=Sequence derived from alignment at L-elsbetiae_contig13614:1636..2828+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13614:1636..2828+ >mRNA_L-elsbetiae_contig13614.2752.1 ID=mRNA_L-elsbetiae_contig13614.2752.1|Name=mRNA_L-elsbetiae_contig13614.2752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=708bp|location=Sequence derived from alignment at L-elsbetiae_contig13614:1636..2828+ (Laminarionema elsbetiae ELsaHSoW15)back to top |