mRNA_L-elsbetiae_contig136.2736.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig136.2736.1 vs. uniprot
Match: A0A6H5KUV0_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUV0_9PHAE) HSP 1 Score: 307 bits (787), Expect = 9.360e-100 Identity = 173/221 (78.28%), Postives = 183/221 (82.81%), Query Frame = 1 Query: 4 MAYLSFLAAILLGVPAANAFFMS----SAGGGVQRADFLKQVGGAAAVATAGIAAAPLASVAAATPA---VGSMAPDFTLPSNTGKDIGLKDLLKTAKHTVLYFYPGDFTSGCTIEAQGFQKDFDKYGAANAQIVGVSVDTIEKHLNFEKSYSLQFPLLSDIGASVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVEGKVAKHSAEVLATLATL 645 MAYLS LA IL G+P+ AF MS S+G G+QRADFL+QVG V AGIA VGSMAPDFTLPSN GKDI LKDLLK AKHTVLYFYPGDFTSGCTIEAQGFQ+DF+KYGA NAQIVGVSVD+IEKHLNFEKSY+LQFPLLSDIGA+VADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVE KVAKHSAEVLATLATL Sbjct: 2 MAYLSILAVILAGLPSTGAFTMSVRPSSSGVGLQRADFLRQVG----VGAAGIAXXXXXXXXXXXXXXXXVGSMAPDFTLPSNAGKDISLKDLLKQAKHTVLYFYPGDFTSGCTIEAQGFQRDFEKYGANNAQIVGVSVDSIEKHLNFEKSYNLQFPLLSDIGANVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVESKVAKHSAEVLATLATL 218
BLAST of mRNA_L-elsbetiae_contig136.2736.1 vs. uniprot
Match: A0A835ZEZ0_9STRA (Peroxiredoxin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEZ0_9STRA) HSP 1 Score: 210 bits (534), Expect = 8.720e-62 Identity = 108/151 (71.52%), Postives = 121/151 (80.13%), Query Frame = 1 Query: 187 PAVGSMAPDFTLPSNTG-KDIGLKDLLKTAKHTVLYFYPGDFTSGCTIEAQGFQKDFDKYGAANAQIVGVSVDTIEKHLNFEKSYSLQFPLLSDIGASVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVEGKVAKHSAEVLATL 636 PAVGS APDFTLPSN G K L DL T K TVLY YPGDFTSGCTIEA+GFQKD D+Y A NAQ+VG+SVD+ EKHL+F+K Y L F LLSD A VAD YG+KLDIP +GKFANR+T+II DGKIEKVFTDVE VA+HS+EVLA L Sbjct: 66 PAVGSAAPDFTLPSNDGGKAYSLSDLTGTGKTTVLYAYPGDFTSGCTIEARGFQKDIDRYKALNAQVVGMSVDSAEKHLDFKKKYGLDFILLSDKNAVVADKYGAKLDIPIIGKFANRITYIISPDGKIEKVFTDVESHVAQHSSEVLAYL 216
BLAST of mRNA_L-elsbetiae_contig136.2736.1 vs. uniprot
Match: A0A7S3UYL6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYL6_HETAK) HSP 1 Score: 206 bits (525), Expect = 3.900e-60 Identity = 97/147 (65.99%), Postives = 118/147 (80.27%), Query Frame = 1 Query: 196 GSMAPDFTLPSNTGKDIGLKDLLKTAKHTVLYFYPGDFTSGCTIEAQGFQKDFDKYGAANAQIVGVSVDTIEKHLNFEKSYSLQFPLLSDIGASVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVEGKVAKHSAEVLATL 636 G AP F LPSNTGKDI L+DL T K+T+LYFYPGDFT GCTIEA F++DFD++ NAQIVGVSVD+++KHL+F+K Y L+FPLLSD GA V++ YGS L IP +GKF+NR T+II +GK+ KV+TDVE KVAKHS EVLA L Sbjct: 93 GGAAPTFKLPSNTGKDISLEDLTSTGKYTILYFYPGDFTQGCTIEANAFERDFDEFAKLNAQIVGVSVDSVDKHLDFKKKYGLRFPLLSDQGAVVSESYGSSLSIPLLGKFSNRQTYIISPEGKVVKVYTDVESKVAKHSQEVLADL 239
BLAST of mRNA_L-elsbetiae_contig136.2736.1 vs. uniprot
Match: L1J8E5_GUITC (Peroxiredoxin n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J8E5_GUITC) HSP 1 Score: 183 bits (464), Expect = 3.630e-51 Identity = 94/153 (61.44%), Postives = 110/153 (71.90%), Query Frame = 1 Query: 187 PAVGSMAPDFTLPSNTGKDIGLKDLLKTAKHTVLYFYPGDFTSGCTIEAQGFQKDFDKYGAANAQIVGVSVDTIEKHLNFEKSYSLQFPLLSDIGASVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVEGKVAKHSAEVLATLATL 645 P+V + APDF LPSN GKDIGLKDL K TVLYFYPGDFTSGCTIEA F+K A A+IVGVSVD++EKHL+F K Y L FPLLSD G V+ LYGS L IPFMG F+NR T+II G + VFTDV+ ++ KH+ EV+A L L Sbjct: 89 PSVNAPAPDFLLPSNEGKDIGLKDL--KGKWTVLYFYPGDFTSGCTIEANNFEKASADIRALGAEIVGVSVDSVEKHLDFAKKYGLSFPLLSDQGGKVSQLYGSALQIPFMGSFSNRQTYIIDPSGNLRWVFTDVQSRLNKHADEVIAKLKEL 239
BLAST of mRNA_L-elsbetiae_contig136.2736.1 vs. uniprot
Match: A0A4D9CLH8_9STRA (Thioredoxin domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLH8_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.890e-48 Identity = 89/153 (58.17%), Postives = 109/153 (71.24%), Query Frame = 1 Query: 187 PAVGSMAPDFTLPSNTGKDIGLKDLLKTAKHTVLYFYPGDFTSGCTIEAQGFQKDFDKYGAANAQIVGVSVDTIEKHLNFEKSYSLQFPLLSDIGASVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVEGKVAKHSAEVLATLATL 645 PA G APDF+LPS+ GK + L DL K K+TVLYF+P FTS CT+EA+ FQ+D D Y NAQIVGVSVD +K +F+ L F LLSD GA +++ YGS LDIPF+G+F+NR T+II DGK+ KVFT+VE KV KHS EVL L L Sbjct: 128 PAEGIEAPDFSLPSSLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKISEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKAL 280
BLAST of mRNA_L-elsbetiae_contig136.2736.1 vs. uniprot
Match: A0A7S0Z1C5_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z1C5_9CRYP) HSP 1 Score: 173 bits (438), Expect = 2.110e-47 Identity = 91/158 (57.59%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 178 AATPAVGSMAPDFTLPSNTGKDIGLKDLLKTAKHTVLYFYPGDFTSGCTIEAQGFQKDFDKYGAANAQIVGVSVDTIEKHLNFEKSYSLQFPLLSDIGASVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVEGKVAKHSAEVLATLATL*K 651 AATPA+ + APDF LPSN K IGLKDL K TVLYFYPGDFTSGCTIEAQ F+K+ K A+IVGVSVD+ EKHL+F K Y L FPLLSD G V+D YGS L + +G F+NR T++I G ++ VFTDV+ K+ H+ +V+A L L K Sbjct: 81 AATPAIDAPAPDFELPSNRDKSIGLKDL--KGKWTVLYFYPGDFTSGCTIEAQNFEKNAPKIRDLGAEIVGVSVDSAEKHLDFAKKYGLSFPLLSDKGGKVSDSYGSALKLGPIGTFSNRQTYLIDPSGTLKYVFTDVQSKIQSHAEDVVAKLTELTK 236
BLAST of mRNA_L-elsbetiae_contig136.2736.1 vs. uniprot
Match: A0A7S0U0Z0_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U0Z0_HEMAN) HSP 1 Score: 169 bits (429), Expect = 6.370e-46 Identity = 98/188 (52.13%), Postives = 125/188 (66.49%), Query Frame = 1 Query: 88 VQRADFLKQVGGAAAVATAGIAAAPLASVAAATPAVGSMAPDFTLPSNTGKDIGLKDLLKTAKHTVLYFYPGDFTSGCTIEAQGFQKDFDKYGAANAQIVGVSVDTIEKHLNFEKSYSLQFPLLSDIGASVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVEGKVAKHSAEVLATLATL*K 651 V R F + G AA V T G+ + S AATP + + APDF LPSN K+IGLKDL K TVLYFYPGDFTSGCTIEAQ F+K+ + A+IVGVSVD+ EKHL+F K Y L FPLLSD G V++ YG+ L + +G F+NR T++I G ++ VFTDV+ K+ H+ EV+A L+ L K Sbjct: 69 VSRRSFFSK-GAAAGVVTTGL----VQSAFAATPTIDAPAPDFELPSNRDKNIGLKDL--KGKWTVLYFYPGDFTSGCTIEAQNFEKNSKQIRDLGAEIVGVSVDSAEKHLDFAKKYGLSFPLLSDKGGKVSESYGTALKLGPIGTFSNRQTYLIDPSGNLKYVFTDVQSKIKVHAEEVVAKLSELTK 249
BLAST of mRNA_L-elsbetiae_contig136.2736.1 vs. uniprot
Match: A0A7S1FR32_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FR32_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.260e-43 Identity = 83/152 (54.61%), Postives = 106/152 (69.74%), Query Frame = 1 Query: 193 VGSMAPDFTLPSNTGK-DIGLKDLLKTAKHTVLYFYPGDFTSGCTIEAQGFQKDFDKYGAANAQIVGVSVDTIEKHLNFEKSYSLQFPLLSDIGASVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVEGKVAKHSAEVLATLATL 645 +G+ APDF LPS+TGK + L+DL K TVLYFYPG FTSGCT+EA+GFQ+D D Y + NAQ+VGVSVD +EK+ F + +L F +LSD G V+ Y S L +P G F+NR T+IIG DG + VF DVE +VA+HS EV+ L L Sbjct: 91 LGATAPDFDLPSSTGKGNTTLRDLTSKQKWTVLYFYPGAFTSGCTLEARGFQRDQDAYRSLNAQVVGVSVDPVEKNAQFCAAENLDFFMLSDFGGKVSKRYNSALTVPGFGTFSNRKTYIIGPDGTVRWVFEDVESRVARHSGEVIEKLREL 242
BLAST of mRNA_L-elsbetiae_contig136.2736.1 vs. uniprot
Match: B7G0F8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0F8_PHATC) HSP 1 Score: 161 bits (407), Expect = 3.510e-43 Identity = 89/174 (51.15%), Postives = 117/174 (67.24%), Query Frame = 1 Query: 127 AAVATAGIAAAPLASVAAATPAVGSMAPDFTLPSNTGK-DIGLKDLLKTAKHTVLYFYPGDFTSGCTIEAQGFQKDFDKYGAANAQIVGVSVDTIEKHLNFEKSYSLQFPLLSDIGASVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVEGKVAKHSAEVLATLATL 645 AAVAT +APL + A P G+ AP F LP++ G LK+L+ + K TVLYFYPG F+ GCT+EA+GFQ+D ++Y A NAQIVGVSVD +EK+ F + L F +LSD G V++LYGS L +P G F+NR T+II +G + VFTDVE ++A+HS EVL L L Sbjct: 37 AAVATGVTVSAPLPAF--AVPVTGAKAPFFELPNSRGSGSTSLKNLINSGKWTVLYFYPGAFSKGCTLEARGFQRDIERYRALNAQIVGVSVDPVEKNAQFCSAEGLDFYMLSDTGGRVSNLYGSALSVPGFGMFSNRQTYIIDPEGNLRWVFTDVESRIARHSVEVLEKLNEL 208
BLAST of mRNA_L-elsbetiae_contig136.2736.1 vs. uniprot
Match: A0A7S2R3P2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3P2_9STRA) HSP 1 Score: 160 bits (405), Expect = 8.680e-43 Identity = 85/160 (53.12%), Postives = 106/160 (66.25%), Query Frame = 1 Query: 172 VAAATPAVGSMAPDFTLPSNT--GKDIGLKDLLKTAKHTVLYFYPGDFTSGCTIEAQGFQKDFDKYGAANAQIVGVSVDTIEKHLNFEKSYSLQFPLLSDIGASVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVEGKVAKHSAEVLATLATL 645 VAA P+V + APDF LP++ G L++L T K TVLYFYPG FTSGCT+EA+GFQ+D+DKY +N Q+VG+SVD EK+ F +S L F +LSDIG V+ YGS L +P G F+NR T++I G I VF DVE VA HS EVL L L Sbjct: 61 VAAPLPSVNTKAPDFLLPNSREDGSKTNLENLTSTKKWTVLYFYPGAFTSGCTLEARGFQRDYDKYRQSNVQVVGISVDPPEKNAKFCESEKLDFYMLSDIGGEVSKSYGSALSVPGFGTFSNRQTYVIDPQGMIRHVFVDVESHVASHSQEVLDKLQEL 220 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig136.2736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig136.2736.1 >prot_L-elsbetiae_contig136.2736.1 ID=prot_L-elsbetiae_contig136.2736.1|Name=mRNA_L-elsbetiae_contig136.2736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp MAYLSFLAAILLGVPAANAFFMSSAGGGVQRADFLKQVGGAAAVATAGIAback to top mRNA from alignment at L-elsbetiae_contig136:4624..8909+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig136.2736.1 ID=mRNA_L-elsbetiae_contig136.2736.1|Name=mRNA_L-elsbetiae_contig136.2736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4286bp|location=Sequence derived from alignment at L-elsbetiae_contig136:4624..8909+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig136:4624..8909+ >mRNA_L-elsbetiae_contig136.2736.1 ID=mRNA_L-elsbetiae_contig136.2736.1|Name=mRNA_L-elsbetiae_contig136.2736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1290bp|location=Sequence derived from alignment at L-elsbetiae_contig136:4624..8909+ (Laminarionema elsbetiae ELsaHSoW15)back to top |