mRNA_L-elsbetiae_contig1331.2563.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1331.2563.1
Unique NamemRNA_L-elsbetiae_contig1331.2563.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: D7FK72_ECTSI (Rab32L, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK72_ECTSI)

HSP 1 Score: 459 bits (1180), Expect = 1.630e-155
Identity = 240/308 (77.92%), Postives = 263/308 (85.39%), Query Frame = 1 
Query:    1 MAVPKTSESRRAKSISASQDNDVVG-SAPPARRLPPEREGALARINSRAQRFAETSPTTKGRGK-MVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQRLRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALKGTAKASFSELPPHDVEALDAEVDGLDGPGADRERSPGQQMLRDHQWFGTQTVTAKQGCACVVS 918
            M V K S+SRRAKS S S  + +   SAPP RRLPPEREG++ARINSRAQ+FA+ SP  K  G  MVKFMFLGD ECGKTAIVTRF T +F P YKPTMDVDFTQSNVMVGEQRLRV LWQ          VSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRL+GWYATSAKDN+N+DLAIK VLR+AL+G+A+++F EL   DV+ALD E+  L+GPG+DRERSPGQQ+LRDHQWFGTQ V+ KQGCACVVS
Sbjct:    1 MVVNKVSDSRRAKSTSGSPGDGLPAVSAPPGRRLPPEREGSMARINSRAQKFAD-SPGAKSSGTTMVKFMFLGDSECGKTAIVTRFATGTFDPVYKPTMDVDFTQSNVMVGEQRLRVALWQ----------VSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNSNIDLAIKEVLRRALQGSARSAFGELEQDDVDALDEELTQLNGPGSDRERSPGQQILRDHQWFGTQNVSTKQGCACVVS 297
[Close]
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: A0A835YX00_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX00_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.370e-29
Identity = 70/212 (33.02%), Postives = 119/212 (56.13%), Query Frame = 1 
Query:  130 INSRAQRFAETSPTTKGRGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQRLRVGLWQASRRGGRCCGVSEKKEGSLATNT--FRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALKGTAKASFSEL 759
            +N R+ R  +      G  K+ K + LGD   GKTA+  RF ++ F P +KPT+ VDF+Q+++ VG Q +R+ LW           ++EKKEG+   N   F+G+HGAFIV DI +  T   + +++ +IDE +A+                      V  +K+++D+LC++++++ W+ATSAK N N++LA+K ++   L G   ++F  +
Sbjct:    1 MNRRSSRAEKYDSPHLGPAKL-KILLLGDSATGKTAVTQRFASNRFDPAHKPTVAVDFSQTSITVGTQMVRLALWN----------LAEKKEGTQQVNGNHFQGVHGAFIVVDITQPHTVAKMLQWKALIDETVAQ----------------------VQFSKATLDRLCEKYQVDSWFATSAKTNVNIELAMKQMVLSVLSGPYHSNFQRV 179
[Close]
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: A0A1X2H1Y9_SYNRA (Ras-related protein Rab n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H1Y9_SYNRA)

HSP 1 Score: 119 bits (299), Expect = 3.820e-27
Identity = 69/189 (36.51%), Postives = 108/189 (57.14%), Query Frame = 1 
Query:  172 TKGRGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQRL-RVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKL---AEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQAL 726
            T+ R  + K + +GD   GKT+I+ R+V + FS  YK T+ VDF    +  G   + R+ LW  +          +++ G++    ++   GAF+V D+ R  TF GV +++  ID K+   +  G G +PVVLLANKSD L  DG S+N   +DK C+ +    W+ TSAK+NTN+D A +V++ + L
Sbjct:    3 TEVREYLYKILVVGDLGTGKTSIIRRYVHNIFSTNYKSTIGVDFALKVIQWGPDIIVRLQLWDIA---------GQERFGNMTRVYYKEALGAFVVYDVTRPNTFEGVTRWKNDIDSKVRLPSSWGGGPIPVVLLANKSD-LKSDGQSVNAGELDKFCEENGFMQWFETSAKNNTNIDDAARVLIEKIL 181
[Close]
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: A0A8C4ZL11_GADMO (Ras-related protein Rab n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4ZL11_GADMO)

HSP 1 Score: 113 bits (283), Expect = 7.110e-25
Identity = 59/179 (32.96%), Postives = 98/179 (54.75%), Query Frame = 1 
Query:  190 MVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQRLRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQAL 726
            + K + +GD   GKTA++ R+V  ++S  Y+ T+ VDF    +    + +R+ LW  +          +++ G++    +R   GAFIV D  R  TF  V K+++ +D KL      S+  VLLANK D+  ++ ++ N   MD+ CK H   GW+ TSAKDNTN++ A   +++  +
Sbjct:   22 LYKVLVIGDLGVGKTAVIRRYVHQTYSANYRATIGVDFALKVLNWDSETIRLQLWDIA---------GQERFGNMTRVYYREAMGAFIVFDATRPTTFEAVTKWKEDLDSKLMLANGRSIATVLLANKCDQGRDEFINNNGVKMDQFCKEHGFVGWFETSAKDNTNINEAANFLVKHIM 191
[Close]
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: A0A8H7UMP0_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UMP0_9FUNG)

HSP 1 Score: 117 bits (292), Expect = 1.350e-23
Identity = 78/225 (34.67%), Postives = 119/225 (52.89%), Query Frame = 1 
Query:  181 RGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVG-EQRLRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLA---EVGAGSLPVVLLANKSDRLGED-GVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALKGTAKASFSELPPHDVEALDAEVDGLDGPGADRERSPG 840
            R  + KF+ +GD   GKT+I+ R+V + FS  YK T+ VDF    +    E  +R+ LW  +          +++ G++    ++   GAF+V D+ R +TF GV K++  +D K++     G G++PVVLLANKSD +GE  G   N + MD  CK +    W+ TSAKDNTN+D A + ++   L G  +     L  HD E  +     L     D+ R+ G
Sbjct:  484 REYLYKFLVVGDLGTGKTSIIKRYVHNIFSMHYKSTIGVDFALKVIQWSPEIVVRLQLWDIA---------GQERFGNMTRVYYKEALGAFVVYDVTRPQTFEGVRKWKADLDSKISLPEAWGGGNIPVVLLANKSDLIGEGHGQHANPTEMDTFCKENGFIKWFETSAKDNTNIDEAARHLVTTIL-GIER---EHLDRHDAENFENNNQQLRVDSRDKNRNDG 695
[Close]
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: A0A3B3R5J7_9TELE (Ras-related protein Rab n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3R5J7_9TELE)

HSP 1 Score: 108 bits (271), Expect = 2.210e-23
Identity = 61/181 (33.70%), Postives = 101/181 (55.80%), Query Frame = 1 
Query:  190 MVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQR--LRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQAL 726
            + K + +GD   GKT+I+ R+V   FS  Y+ T+ VDF    V+  + R  +R+ LW  +          +++ G++    +R   GA +V D+ R  TF  V K++  +D K++      +PVVLLANKSD+   +G+S     +D  CK H   GW+ TSAK+NTN++ A++ +++  L
Sbjct:    6 LFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALK-VLTWDNRTVIRLQLWDIA---------GQERYGNMTRVYYREAVGALLVFDVTRTSTFQAVLKWKADLDGKVSLANGKPVPVVLLANKSDQ-SREGLSSQLPKLDAFCKEHGFVGWFETSAKENTNINAAVRCLVQNIL 175
[Close]
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: UPI001D065B66 (ras-related protein Rab-38 isoform X3 n=2 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D065B66)

HSP 1 Score: 109 bits (272), Expect = 4.030e-23
Identity = 63/184 (34.24%), Postives = 97/184 (52.72%), Query Frame = 1 
Query:  181 RGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQR-LRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALK 729
            R  + K + +GD   GKT+I+ R+V   FS  Y+ T+ VDF    +   E   +R+ LW  +          +++ G++    F+   GAFIV D  R  TF  V  ++  +D K+       +P VLLANK D+  ++G+  N   MD+ CK      W+ATSAKDN N+D A KV++ + L+
Sbjct:   46 RDHLYKVLVIGDLATGKTSIIKRYVHRFFSQNYRATIGVDFALKVINWDENTVIRLQLWDIA---------GQERYGNMTRVYFKEAVGAFIVFDCTRMNTFESVKNWKTDLDSKVLLADGSKIPCVLLANKCDQ-PKEGIVNNSHQMDEYCKTEGFAAWFATSAKDNINIDEAAKVLIERILE 219
[Close]
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: UPI001E275648 (ras-related protein Rab-32 isoform X2 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E275648)

HSP 1 Score: 110 bits (274), Expect = 5.570e-23
Identity = 63/184 (34.24%), Postives = 98/184 (53.26%), Query Frame = 1 
Query:  181 RGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQR-LRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALK 729
            R  + K + +GD   GKT+I+ R+V   FS  Y+ T+ VDF    +   E   +R+ LW  +          +++ G++    F+   GAFIV D  R  TF  V  ++  +D K+       +P VLLANK D+  ++G+  N S MD+ CK      W+ATSAKDN N+D A K+++ + L+
Sbjct:   90 RDHLYKVLVIGDLATGKTSIIKRYVHRFFSQNYRATIGVDFALKVINWDENTVIRLQLWDIA---------GQERYGNMTRVYFKEAVGAFIVFDCTRVNTFESVKNWKTDLDSKVLLADGSKIPCVLLANKCDQ-PKEGIVNNNSQMDEYCKTEGFAAWFATSAKDNINIDEAAKILIEKILE 263
[Close]
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: UPI001D0797D1 (ras-related protein Rab-38 isoform X2 n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D0797D1)

HSP 1 Score: 109 bits (273), Expect = 7.410e-23
Identity = 65/203 (32.02%), Postives = 103/203 (50.74%), Query Frame = 1 
Query:  124 ARINSRAQRFAETSPTTKGRGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQR-LRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALK 729
            +R +   Q  +      + R  + K + +GD   GKT+I+ R+V   FS  Y+ T+ VDF    +   E   +R+ LW  +          +++ G++    F+   GAFIV D  R  TF  V  ++  +D K+       +P VLLANK D+  ++G+  N   MD+ CK      W+ATSAKDN N+D A KV++ + L+
Sbjct:   70 SRTSGHNQLSSANQTQIRRRDHLYKVLVIGDLATGKTSIIKRYVHRFFSQNYRATIGVDFALKVINWDENTVIRLQLWDIA---------GQERYGNMTRVYFKEAVGAFIVFDCTRMNTFESVKNWKTDLDSKVLLADGSKIPCVLLANKCDQ-PKEGIVNNSHQMDEYCKTEGFAAWFATSAKDNINIDEAAKVLIERILE 262
[Close]
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: L8HI25_ACACA (Ras-related protein Rab n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HI25_ACACA)

HSP 1 Score: 107 bits (266), Expect = 1.120e-22
Identity = 60/181 (33.15%), Postives = 96/181 (53.04%), Query Frame = 1 
Query:  190 MVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQRL-RVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALK 729
            + K + +GD   GKTAI+ R V  +FS  YK T+ VDF    +  G   L  + LW  +          +++ G+L    ++    AF+V D+ R  +F  V +++  ID K+       LPV+LLANK D +     +LN+  MD+ CK +    W+ATSAK+NTN+D ++  ++   +K
Sbjct:   17 LFKVLVVGDMATGKTAIIRRCVEGAFSDNYKTTIGVDFALKTIKWGSNTLVYLQLWDIA---------GQERYGNLTRVYYKEAVAAFVVFDLTRNSSFESVKRWKDDIDNKVRLPNGDPLPVILLANKCDMVK---TALNEEVMDQYCKENGFISWFATSAKENTNIDESVACIVNHVIK 185
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK72_ECTSI1.630e-15577.92Rab32L, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
A0A835YX00_9STRA1.370e-2933.02P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1X2H1Y9_SYNRA3.820e-2736.51Ras-related protein Rab n=1 Tax=Syncephalastrum ra... [more]
A0A8C4ZL11_GADMO7.110e-2532.96Ras-related protein Rab n=1 Tax=Gadus morhua TaxID... [more]
A0A8H7UMP0_9FUNG1.350e-2334.67Uncharacterized protein n=1 Tax=Umbelopsis vinacea... [more]
A0A3B3R5J7_9TELE2.210e-2333.70Ras-related protein Rab n=2 Tax=Paramormyrops king... [more]
UPI001D065B664.030e-2334.24ras-related protein Rab-38 isoform X3 n=2 Tax=Cocc... [more]
UPI001E2756485.570e-2334.24ras-related protein Rab-32 isoform X2 n=1 Tax=Harm... [more]
UPI001D0797D17.410e-2332.02ras-related protein Rab-38 isoform X2 n=1 Tax=Cocc... [more]
L8HI25_ACACA1.120e-2233.15Ras-related protein Rab n=1 Tax=Acanthamoeba caste... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1331contigL-elsbetiae_contig1331:1197..13742 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score462.6
Seed ortholog evalue1.4e-127
Seed eggNOG ortholog2880.D7FK72
KEGG koko:K07918
Hectar predicted targeting categoryother localisation
EggNOG free text desc.BLOC-2 complex binding
EggNOG OGsKOG4423@1,KOG4423@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04031,ko04131
Ec32 ortholog descriptionRab32L, RAB family GTPase
Ec32 orthologEc-17_002970.1
Exons8
Model size1960
Cds size921
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815506.3933957-UTR-L-elsbetiae_contig1331:1196..22351622815506.3933957-UTR-L-elsbetiae_contig1331:1196..2235Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1331 1197..2235 -
1691682931.6573052-UTR-L-elsbetiae_contig1331:1196..22351691682931.6573052-UTR-L-elsbetiae_contig1331:1196..2235Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1331 1197..2235 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815506.4037232-CDS-L-elsbetiae_contig1331:2235..24161622815506.4037232-CDS-L-elsbetiae_contig1331:2235..2416Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 2236..2416 -
1691682931.6694489-CDS-L-elsbetiae_contig1331:2235..24161691682931.6694489-CDS-L-elsbetiae_contig1331:2235..2416Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 2236..2416 -
1622815506.5452604-CDS-L-elsbetiae_contig1331:4265..43491622815506.5452604-CDS-L-elsbetiae_contig1331:4265..4349Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 4266..4349 -
1691682931.6797721-CDS-L-elsbetiae_contig1331:4265..43491691682931.6797721-CDS-L-elsbetiae_contig1331:4265..4349Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 4266..4349 -
1622815506.5774014-CDS-L-elsbetiae_contig1331:5434..55171622815506.5774014-CDS-L-elsbetiae_contig1331:5434..5517Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 5435..5517 -
1691682931.694004-CDS-L-elsbetiae_contig1331:5434..55171691682931.694004-CDS-L-elsbetiae_contig1331:5434..5517Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 5435..5517 -
1622815506.5911634-CDS-L-elsbetiae_contig1331:7125..71761622815506.5911634-CDS-L-elsbetiae_contig1331:7125..7176Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 7126..7176 -
1691682931.707935-CDS-L-elsbetiae_contig1331:7125..71761691682931.707935-CDS-L-elsbetiae_contig1331:7125..7176Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 7126..7176 -
1622815506.60244-CDS-L-elsbetiae_contig1331:7658..77931622815506.60244-CDS-L-elsbetiae_contig1331:7658..7793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 7659..7793 -
1691682931.7212644-CDS-L-elsbetiae_contig1331:7658..77931691682931.7212644-CDS-L-elsbetiae_contig1331:7658..7793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 7659..7793 -
1622815506.6124413-CDS-L-elsbetiae_contig1331:9131..92701622815506.6124413-CDS-L-elsbetiae_contig1331:9131..9270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 9132..9270 -
1691682931.731771-CDS-L-elsbetiae_contig1331:9131..92701691682931.731771-CDS-L-elsbetiae_contig1331:9131..9270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 9132..9270 -
1622815506.6228173-CDS-L-elsbetiae_contig1331:9900..100201622815506.6228173-CDS-L-elsbetiae_contig1331:9900..10020Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 9901..10020 -
1691682931.741835-CDS-L-elsbetiae_contig1331:9900..100201691682931.741835-CDS-L-elsbetiae_contig1331:9900..10020Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 9901..10020 -
1622815506.6326036-CDS-L-elsbetiae_contig1331:13614..137421622815506.6326036-CDS-L-elsbetiae_contig1331:13614..13742Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 13615..13742 -
1691682931.7540042-CDS-L-elsbetiae_contig1331:13614..137421691682931.7540042-CDS-L-elsbetiae_contig1331:13614..13742Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1331 13615..13742 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1331.2563.1prot_L-elsbetiae_contig1331.2563.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1331 2236..13742 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1331.2563.1

>prot_L-elsbetiae_contig1331.2563.1 ID=prot_L-elsbetiae_contig1331.2563.1|Name=mRNA_L-elsbetiae_contig1331.2563.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp
MAVPKTSESRRAKSISASQDNDVVGSAPPARRLPPEREGALARINSRAQR
FAETSPTTKGRGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVD
FTQSNVMVGEQRLRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAF
IVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGV
SLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALKGTAKASF
SELPPHDVEALDAEVDGLDGPGADRERSPGQQMLRDHQWFGTQTVTAKQG
CACVVS*
back to top

mRNA from alignment at L-elsbetiae_contig1331:1197..13742-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1331.2563.1 ID=mRNA_L-elsbetiae_contig1331.2563.1|Name=mRNA_L-elsbetiae_contig1331.2563.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=12546bp|location=Sequence derived from alignment at L-elsbetiae_contig1331:1197..13742- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCAGTTCCTAAGACCAGCGAAAGCCGCAGAGCGAAGAGCATATCGGC
GTCGCAGGACAATGATGTGGTAGGTTCGGCACCGCCAGCAAGGAGACTAC
CGCCAGAGCGCGAAGGGGCACTAGCTCGGTGAGAGTTCGTTCCAACTGCT
TGTTAGGAATCAGTAGGTCGTTTCTTGTCACATACGAGGGTGTGTGCGAG
AGTATGGCCATAGGTCGGGTTGCTGCGGCGGTTGACTGGGAAAGTTAAGC
TGAATCAACCCTTATGCGTAGATAAGGAGGTGCCATTTCCCCCCCCTGTG
AGGGATATGTTGGAGCGTGTAAAGAACAACGTTAAAAACACCGGAGCCTG
GACAGGCTGTGCCCCGAGTGCTTTGGTAGCGATGCCATGCAACAACTGCC
AGAAGGAAGGCTCCAAGCAGACACGAATAGGAAGGGACGCTGCTGGTAGC
TCGAAGTAACGAAATTACACACGCGCACACGAGGTTCAGCAGAGAGCGGG
GAGCGGAACGACTCGATGACTCCAGGCGCGGCTTCAACCCCTAACGGACT
GAACGGTCTTGCGTAGATAGAACTACTTCAAGAGAATAATAGACTACGAT
GTGGACTTGGACACACGTCTGTGACTGCTATTGGTTAGCCTCTACGTACA
AATGCTCTACAGCACTGCTGACATGCACCACGCTCCAGCTGTAGAACCTC
GCCCCGTGTGCCGAATCTCTAGGGAGTGAGGGGATGCACGCCAAATAGCC
CGCTGGGGAAAATTAACATTTCTATAGTACCTAGGTACAATCCTTTTCGT
GTACAGGAGGGCCTGAGAAAAACGAAAAACGCGTAGCGAGTGCGGAGTCC
TCCAATTTTCTATGATATCCGTATAGAGGACACCCTGGGGCGGAGTTGAT
CAAGAGCCGCAGCAGCAGCGCTCCAGAACTCAGCAATCTGGGCCGACAGC
AAACATCTTCCACTACTACTACTGTATTCACCACCACAGACCTCAACGTC
CTCAATTTACGGGTCTCCAGCAGTAGCTAATGGTATGAGCTACGGCTGTG
GACCGGTAGTTGAGAGGATGGGATCTGTGGCGGCAAGCACAGCAGCGGAT
GTTCGCTGTCGGTCTAGATTTGCCGAGGGTTTGACCCAGTTGCAGATATA
AGCGAGCCGACGCGCGTGTCCCATCTCCATGGTGTCCCCTCTACTGATAT
CATAGAAGATTGTAGCACTCCGCACAACCCACACCTTATTTGAACGCCCG
CAAAATGTTGCCTGATTTGTCTTGATTTTTGAATGGGCGCAAAAAATATC
TTGAGTTCAGCGTAAGCGGTTGGAGGTAGACCGCGTGATACGCACGTAAA
AAAACAGCTCCGCTCGTCGCTGGGCGAGCGAATCATCACGTCTTTTCTTG
CGCAGCCCTTTCCTGCTGGCCTAGTCGATCTGCTTGTGGTGGATGTGTGT
TTATTCGGCCGTTTTCAAAATCGTCGATGCCCCAAGGGAGGTTGCGTGCA
TCTCCTGAAGGGGACGGCGAGGGGATCCACAGACAGGACTTTGGATCCAG
GGGCTCTGTGAAAAGCACGGTTTGATTGATTTCTTGAATGCACATTTTTT
TTGGTGCATATTTACGCTGAAACTGCCAGCACGGGCCCTCCCAAAAGCAC
CACTTGCCAGTTCGGCGCTTAGCGTCCCGCTGCGATATGAAGTGAGACAC
TCCAACGCCACAGTTTGCAGTTCTCTACAGAGGAATGCTCCGCTACTGAA
GTTGTAGCTGTCTTAGAGGTGGGAGTTTGCTCTCTAAAGGTACAAAAATC
ACTGTTTTGAATGGACTGTCGCAGATACCTCCAACTGGCGGCTTGGTGTT
CGGGAGATCAGATAGCTCGCTCCTCACAGGCAAGAACAGCAGAAGCTGCT
GGGAGGGCCTACTGATATGGTGTGTTGGGGCCGCCCCATATCCTTGGTAG
TAGCATCAGAAAGCTATTACCCACGCTTTCGATGTTGTGGTGAGCACGAA
GGATGTTTCTAACCGCTCTTTTCCCGGCCAATCGGGTGAATATTTGGGTC
CACGCCCCGGAGCCTCATGCCGTGGTTTTTGCCTCGATCAAGAAACGGAC
TCGACGTGAATGTAGCCCGGCTGTTTTGAAAGAGTGTGGAATAGAGGAAA
GAAATAAGGATGCACAGTATTTTTTTGATACTGCACATTTCACACGCGCA
AGGGGTGGGTGAAAAAAAACTCCGCAAACACGGCAAAGAAGAACCAACAA
TCTTGGAGCACCTCTGATACTTCGCAGAACTGTCAGAACATGCGCGCGAG
CATTTTTGGAAATCCCCCACAAATTTCAATCGAGGCCCCGTGATGTTCAG
CAAGGGTATGCGACTATCCTTCGAGAAAGGCCAATACTGATCAATGGGTA
CCCCTCACCGCCGCCTTAAGAGGGCGGACGGAGGTAGGGTGGTCTTAGAA
GCTAAGTCTGCCGCACGGGGTGAACTGAATCGGCTGCTGCCCGATTTGCG
AAGCTCGTTATCCGCCGGGGACTGCAGCATGCAAGAGCTACAAGCTGGGC
TGGCTTTAGTTCGGCAGCTGTTAACTCACCAACCACAAACAAGCATAGCG
AATACAGGGCATCTATCATAGTCAGCGGGTCTTCGCGGTCATGCACGTCC
CAGCTGATGGTTGATCCCGCACGTTTCTCCGGAATATGGTATAATTTTTG
TGGTACAGTCCCGTGAAATGCGGCGTGATTGCGGTTTTTTCAAAGCGCGG
CGGGATTTTTCCTTTTTTTCGGTATCACGAAAACGCACCCTTACACACTC
GCGCGCGCACACGCAAGGCAGTAGCATGCCCAGCATCGACATGTCCGTAC
ACCCTTTCGTCGATACTATCGCCGGCGCCGCTCTTTTCGATGTTCACTGG
AGAACCATCGATTTTCTGTCTCTCGCGGCCTTTTTTCTTTACGAGTCCGT
CTGCCCCTGAACCTGCCCCTGAACCTGGGTTGAGGCGCGAAAACAATTTC
TCGATTTCCCATGCGGTTTTTTGGAATCACGGTCTGTACTTTTGACACGT
GATTCAGAGAAGAGAAGTTTGATTTTTTGTTATTTGCCCGTCAGTTGTTG
CCAAAAGTATTATCCCACTTTTGCTCAAATCGCGGATAACTCGTTAAAAA
AAAACAAAAATCAATCTTCTCTTCTTTGATCCTCTTGGCCATAGCGCTCC
AAATCGCGTGTCAAAATTACAGCTCGTAATCCGCAAAAACCGCACGGGAA
ATCGATGCCGCCTCTCAGATAATTTTGACGGCCAGCCCAGCTCGTCCCGG
GGTGGGGTGCTGTGCTGCCCCCCCCCCAAAAAATTGCGTTAGCTCCCCCC
CCCCCCCCCCTTGGTATTATGTGCCCTTGCCACTTCGTGGACGAGCCCCG
TCACCCCCCACTCCTGATTGGTCGTTTGGAAGCGGGAAAAATTCCGTGAA
AAGTATTCCCGATGCCATCCTCGCGGTGGAGTGAGTAACCGAGCCGTAGA
AAAATCGGCCCATGGGATGTGGTGTTCCCTCGTGTGCGTGCAACCCTTTT
CCCTGTGCCACGTAAATATGTTTATATATAGTCCTTTATTACCCCCACCT
GCCATTCTGTTATTTCCCACATCTCATGCCCCTCTCGCCTTTCGCAACCG
GCTTGCTGGTTGGCGTGTGACCCCCCCCTCCCCTCCCGTATCCCCGCTGG
GATTCTGCCTCGCAAAAAACAGGATAAATTCTCGGGCGCAGAGATTCGCG
GAGACCAGTCCGACCACCAAGGGGCGGGGCAAAATGGTGAAGTTCATGTT
TTTGGGAGATCCGGAGTGTGGCAAGACCGCGATCGTGACTAGGTGAGGCA
GAAAGGCCCGCTGTCGATGCCTGCGGTGCGGGGGGTGTCTGAGTGTGAGT
GTCAATGTGCGCGCGACCCTGGGTTTATTATTCCTACACAGTTCAGCACA
GAATCCTGTCGGCTGTGGGTCCTATATATAAAGTATATGTCCTGGAGGTC
GATACCAAATTTGTAACAAGCAGCCAGACGGACTTTCGTCCCGCAGTCTT
GGCGCCCCGCAGCGGTCTTGTACACCCCACCCACCACCCCTCTCCTCCCT
CGACGGTTATCTGCTGCTGAACCCCCCCCCGTTGAAGAAGAGGAAGCGGA
CGCCGCTAGAGCGCCGTTAAAACTTAGCACCACAGTGCAAAAAACGGGAC
GAACTAGGTGTAACTATTTGTGTTGTCTGTTCTGCCTATTTATCTGGTGC
AGCACGCGTCTCATCGTGCGCGTCCCCCTGCGGGCAGGCGCAGTCTGCGT
TACATACATACGGTGTAGGTGTAGTGACGTTCATCGCTTGCGCTCATCTC
GTGCACCCCCCCCCCCCCCCGGCCCCAGCCGGTCGGCCGGGCCGTCACAG
CGATCTATGTACATGCCTTGCAACCCTCCCCCCCCCGCCGCCGCCGCCGC
CGCCGCCGCCGCGGTCTGCCAGGTTTGTGACGGACTCGTTTAGTCCAACG
TACAAGCCCACGATGGACGTGGACTTCACGCAGTCGAACGTCATGGTCGG
GGAGCAGCGGCTGCGGGTGGGGTTGTGGCAGGCAAGTCGTCGTGGAGGTC
GTTGTTGCGGCGTAAATACGATATGTACGCACAGCGGTGTGTGTACCGGC
AGTGGTACACACCAGTAATAGGGCAGGTTGTTTTCGATTTGCTTGCGAAA
ATGCACACTGGGTGGTTGCTCGGTTTTCCCAGCACACGAGAGCCGGGGAG
GCTTTTTCGTTTTTGATCGCGGGGGTTAAACTGTGTGAAACGGCACCAAG
GCGCACCAACGCCTTGTGGGCGGAGCGGCGGAGAGGCCAGCTACTGCGAT
TGGAAATTCTGGTGCCCTCCGACGAGAGAATGATCGGTGTATGTACAGCC
TCGCCGCCGACGCGCAGGCTGGGGTTCTCCTGCAGCCATGGGTGGCATGC
CGTGCTGTTTTTGCTGGTGGTATTTATTGTTTTTTTTTGTCTCAAAAGTC
TACTATTCAGCCCGTGGCCATGGACACACATACGGTATACACTCCCAGGG
AGCAACAGTACACTCACTCAACAGCGCCTTGTCGTACACCTCTTTCTAGG
CCCTTTTGTTGCTTTCTTCGCAGCATACGTGGATACTTGGCCCTGTTGTA
CGTCGGCCGACAGGAGGGGGTCCAACCCCCCCGCCCCCCCCTGTGTGACC
CCGTTTGGGTCGTCTGGCTATGGATGAAGGGGGCCAGTGGGGCAGACGAC
AAATATGCCAGTAATGGGAGGGAAAAAAAAAGAAGAGGAAAATAAGATGT
GTAGACAACGTAGCTTGGGTCGATGTTGTACAAGCTCATATTATAGGCCA
TCACACACGCTGCTGGTGCGTCGGGGAACGTGGTGCTTATGCTTCAATGA
ACGCACGATATGTTGCTCGATGACACACGCCTGTTATTATACCTACTCGG
AGTGGTACCTTTCGCCGGCACGTCGTTTATGTTTTGTTGTGTTGTTGTTG
TTGTTGTTGTTGTTTTCGTTGTTTTTTGTTTTGTTTTCCCTCCCATTATT
CGCCTATTCGTCGTCTGCCCCATTGGCCCCCATACTCCACTACGACTAGC
TAGACGACCCACCCGGGGTCACACAGGAGGGGGGGGCTCCTGCGGTGCCT
GCCTGTTTTGTTTTTATCGCGAGCAGGGTTCAGCACTCCCCACCCTCGTC
AACAGCAGTGAAGTCGGAAGTATGATGATCGCGTTCCCAACAGATGAACG
CAAAAAACATAGCCCGGCTCTTCTTGACGGCACACCGAGCATGCGCAGAT
GTCGAGCGCGGCAGGGTCCTCGTCGCTCTCGCTCGCTCTCGTACATGAGC
GAAAACGCTTATTTTCTTTTTGGCGACGCCTGTTTCTTGGTTTCCGTTCT
CCGCGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGGGGCAGG
TTTCGGAGAAGAAGGAGGGCAGCTTGGCGACCAACACATTCCGAGGGCTG
CACGGTGCCTTCATCGTGGCCGACATCGCCAGGCAGGAGACCTTCCACGG
GGTGGCAAAGTTCCGGCAGATCATCGACGAAAAGGTGAGAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCGTGAACACATGGCACTTTGGGGCGTGTTGTACCTGTGGGCGCCACATT
AAAATATTTGTGTTCTCCCCTCTGTGCGTCGTTGCATGGTTTGGGGGAAG
GAACCGAGGGTGGCGTAGATGGAAGCCGTGTGTGTCACGGTGCGAGCAAG
CTCGTCTCTGTCGTATGCGGCAACGTTGGAAGAACAGCAGCTCTCCAAGC
CTTGACTTGCGTTTTTGTCGCTACGACCTGTGTACAATAGGCGCCCCAAA
CCTTGGGGGGACAAAACAATGCATGGCCGTGAAGTGTTGTCCAAACCATG
CCTGACCCCGGCAACTACGCGTTCAAACCGTTGCGAACCACGCTATATTG
CCAAACTTGGGGGGGGCGCCGAATGTATGGGCGTGGGCTAACGCGGGGGG
TGACGTGGCGTTGCAGCTCGCGGAGGTGGGGGCGGGGAGCTTGCCGGTTG
TCCTCCTGGCGAACAAGGTACGGCGAAGAATGACTTGCCTGGCCCCCTGC
CTCGGGTGTTCTTGCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
TTCTCTCGCTTTTGGTTGTGCCGAATATAAGATGTTCTCAGGCTATGTCC
AGGTAGGTGTGTGTTCTTACGTTTGACTTACTAGGTAGGGGTTTATTTAA
CGTTGGGTGTCTGCGAGTTTTTTCGTTCTCGAGTGTCGCGTATCACGCTC
GTATTCGGGCACATTCCCGTTTTGCCCGTCGCTTCTCTCTCTCGCGGTTC
TTGAACGTCAAACCGAAACGCCAGCTGGCGAAACGAAAAAGCACCTTGTC
TCGATGAATCGACTGCATACCGTGAAGATGCGGGTCTTCGCGCACTGTGC
GGTCGTCTCTCGAAATGTTTGGTTCTATGCTTTTTATCGCACAGGGGTGC
CAAGACGCCGATCCGTGCGGAGACGCCGATACCCGTGCGGTAATCGAATT
AAATAATTTGGTTCTAGTTTTAGCGCGCATCTCCCTCTGCGATGACACCG
ATCCGGGCGATTCTGAACAAACCAACGCGGCGATGTGGGAGTGCTTTGAA
CGCACATCTCCCCCTGTACCAACACCCTGATACGTGCGAGGTAGTGCTCC
TGGAGGACGACAGCGACGTAGAACTCATGGGCGGGCCGGAGGGTGGGGAG
GCCGGAGAAGAAGTCGAGCTGTGAAATGTCGTTCATTGGGTTGCAAGTAT
AGATCTGGTGTGGAGCAGTTGATAGCAGCTTGGTGCCAGAATGCTGTGTT
TGCAGAGGTTCATCGCAGGTAGAAGAGGGATTTGGCTGCCAGGGTGAACA
AATACGAAGTCGTAGCCGGCGGGGATGTATGTTCTTCCGCCCGACGGTGT
TTCCAGATATGTATTTCATAGAAGCTGCGCTCGTTTGGCGTCGTGTGGTG
TTTGATCTGTCTCTCTTCTGGGTTTCACGCGTTCTATATTGAGGTGGATC
TTGATTGAGTGGACAAAGTACTAAAAATAGAACAAAGCATTCGAATTTAC
CGGAATTAAAACAGAAAAAGAGGTCACTTACCTACTTGCACGGGAGCCCA
CTATACAAACCCGTGCAGTGCTGCGTTTTTTTGCGCAAAGTGCATGACAT
ATCGCCCAGCCTCGCCAGGTATCGCGGTCTCCGCACAGGGGCGCGGAGAG
CCCGATACATACCCGTGCGATAATCGAATTAAATGATTTGGAACCCCTTT
TTTCTTCCCGCGTCCCCGCGCGGAGACCCCGACCCGTGCGGAGACGCCGA
TCCGTGCGAAGACCCGCATCTTTACGTCAAGCAACCGATCGACCCTGTGT
TTTGTGATGCCGTTGTTTTTGTGTATGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTTTGGTGTTCCTCTGTCATGTCTGCTGCTGTTGCTG
TTGTTGTTGTGGTTGTTTTGGTGTTCCTCTGTCATGTTTGCTGCCGCTGC
TCGCAGTTCACTGCTCACTCTTCTCTCTCTCTCTCTGTCTCTCTCTCTCT
CTGCGTGTGTGTGCATGTCTGTATGTGTGTGCGTGCGTGTTTTTTTTCTT
CTCCTTGCTGTCCATGCGGCGGCAGAGCGATCGATTGGGGGAGGACGGAG
TGTCGTTGAACAAGTCCTCGATGGACAAGCTTTGCAAGAGGCATCGACTG
AACGGCTGGTGAGAACGAAAACACGAGGTTGCGGTTTCATGTATGTGTGC
ATTTTAGTATTTTGTGTGTGTTCTGGTAATCGGCGAAATAAACCAACAAA
GTATAAGCCGCATGAGGATCAAAGCGAAACAATCTTGTGCACATATATAT
TTTTCCAAATCCGAACTTTTGCGGCGTTTATTTTTTGCCATGTCGACCGT
TTCGTCACTTTCACCTTCACGCCTTGTGTTGTTTGTGGCTAGTCGACCAA
AGTTTGCCCACATTAGTTCTTAAGTCTTTCAACATGGGGATCAAAACTCT
CTGCGTTCTACAACGGACGGCTTCGGGTGTTTGGTGAGCCTTGGTATTGA
CGCTGATCAGCAACTCTCTCGCAGGCCCAAACCTCAATATAAGCACGTTC
CCAGCGCTTCGATACAAACTATCGTCTGTGGCCCAGTTCCTGTCGGCCCT
CAATATATTACACGGCCCTCAACAGCCCGAGAGATTAAATCCCTGCATGA
CTTGTTGAATATTTCTCCCCAACGACCGGTTCAAGACAAGCAGCCGGGGG
GGCATGGAGATACGCCCTGATTGAGCGCAGGGCGCGACTTGTATACGGCG
GCCGGCGCTTGGTTGGAGGAGCTTCCGTTTTTAAGGGGCCCAGTCAAAAT
ATTAAGCACGCCATTTTATGGGTTTCATCGATGAGGGCATTCACAACACC
CAGCCTCGGCGTCCGCGCGGCGCATGTCACGTACATATGCCGTGTGACCC
CGAGTGCCCAGCCTTCGATTTATCTCTGTGTGCATATTTTTCAGGGATGC
TTGCTCACGGGTCAAGCGTATTTGAAATATGACGGGTCGGGTCGGATCGG
GTCAAAACGCTGGACCCGTTTGACGGGTCGGGTCGGGTCAGTGACCCGGT
ATGGAAAATCTGACGGGTCGGGTCGGGTCAGTGACCCGGGATGGAAAAAT
CTGACGGGTCGGGTCGGGTCGGGTCGGGTCATCTGACCCGGACCTGACCT
GTACTTGACCCGTCAGATTGACCCGACCCGTGGACATCCCTGATATTTGT
TCTCCCTATTTCCCTGGCTTGTTATTGTTACTGCCTTGGCCAGGTACGCT
ACCTCCGCAAAAGACAACACGAACGTCGACTTGGCCATCAAGGTGGTGTT
GCGGCAGGCTTTGAAGGGGACTGCAAAGTGAGTTGTGTGTGCTCTCGGGG
CTTGAGTCCTCGTTGTTGCCTTGCCGCCGAGTTTCGGCAGTTTCCGTGAC
TTCCCCGGAACTTTTCTTGCGACAGGGGCCTTTTTTGTATTTTTCGGAAT
TGCGCCGCCTTATCATACATACGAGGCGAACAAACCGCGCTGCAACCGGC
CAAACGCTGTGGCCGGCCGATCTATTTTACCGGGACTCGTCTGCTCCCAG
CAACCGCGTTGCCCTGATCAATCGCTTTTTTTTGCGGCATTTCGGGCCTA
AACAGCAGTATATTCCCAATTTCTAATGGGCTTCCGGTTCGGGATTGAAA
TACATAGCTCTGTTGGAATCTTGACCCCGCATCTCCCGTAGAGATCTCCT
GTAGAGATCTCCCGTACCCACATCTCCGGTAGAGATCTACCGTACCCACT
TCTTGACCCCGCGGATTTTCTCCAAGCCCACGAAACCTCAGGCCGTCTGC
TTGCGCGGGTCATCGCTTGTAACCATCCCGACCCGGGGGCACGCCGTCTT
ACGGCTCCGCTCGTCGAATTGACGGAGTGGTGCCGGTTTGACTGCCAAGA
TGTACGACACCAACCCAGTATCTAAGTGATCAAGCAAGAACGCATGAAAA
TACGCACGCACTTGCAGATATCTACCTCCTTACTCAATGAAACGATATCT
CCTTCTGACGGTGCTCCGATATATTCCAGTCCCTACTTCGTGCAAAAGTC
TTGCGCTCAACCTCGAATATTTCGACGAACGGGATAGGTTGAAAGCGCTC
AGTCGCGCCTGTCAGCGACGAGCACAAATCCATTTTTTTGACTCGCCAAG
CTCCACAACGGAGATAGCTACAGACTCGACAAGACGTAGGTGCGTGCGCA
TAGGTATTACAAGGAATGTGTGAGCTTCTTGGAGCGATCTGTAAGACGGA
TCAAATTTGCCCAAAAACGAGTCTCGATCTTGTGTTCGGCCGCAATACTC
GTTCGGTTGGAGAATGCTGACGAGTCGAAATTCGCCGATGCGCCACCAAT
TTCGACAAATTTTGGATCTGCGCGTAGAGGAGAGGCATCTTTACCCGCTC
TTACTTCGTAGCTGTGGTCCTGACAGTCAATTCAACCCTCTTTCTCGAAT
GCTCGGTGTCGGGGGCTCCTTCTGTATTTTCACGACCACTTCACGATCCA
GGTATGTATGTACATACGGCACGGGGCGCGGTAAAATATATCCAGACTCT
CACCTGTCACTACCTCACTATCTGGTCAGTGCCGGTCACTGGCACGTTAC
ACTCTGTACAGCAGTAGCCACTCTCTCACCGCGGTCACTTACTAGACACA
GCCTCACGGCGATGGAGTAGCAGCTATCCAGACGCACACCTGTCACTAGT
CAAAGGTGCTCAGTGCCGGTCACTGGCACAAGTACACTGTACAGCAGTAG
CCACTCCCACGGCGGCCACTCACTAGACAGCCTCACGGCGATGGAGCACC
AGCTGGCAGATGGTGTTGTTGCTGGATCAAGCCTCCACCACTACTGCTAC
CTTCTCCCAAACTTGCATCTTCCTGCGTTTGTTTGATGTGGCGATGTGGC
CACTATTGTACATGATTCGTGCCTACATACTTCGTGCACGACCAAAACAC
GCGCCCGGTGAAGCTGCAACCACACTTACTTCAATCACCCTCTCTCTTCG
TTTTTCAGTGAGATATTGGAATTGGGAGGCGCGGTGCTTATGCAGCGCAA
TTATACATACACACGTCACATGTATTCCAATGCTGACTACCCGTGGTCTA
CCTTTCAAGCGCCGTGATTTGTTCAGCACCTGAACAAAGCCCCCCCCCCC
CGCCGGTGACGGTCGGCCCGCCGCAGGGCTTCTTTCTCGGAGCTGCCCCC
GCACGACGTCGAGGCGCTGGACGCCGAGGTGGACGGGCTGGACGGGCCGG
GGGCGGACAGGGAGCGGTCCCCGGGGCAGCAGATGCTCAGGGATCACCAG
TGGTTCGGGACGCAGACCGTGACCGCGAAGCAAGGGTGCGCCTGCGTGGT
CTCGTGAGCGGGCCTCTAGCCTGGCCTGGCCTGGCCTGGACCTGATTTGT
TCGGCCGGCGCCTTTGCCGCCTATTCGATAGTCGAATCTGGAGCTTTGTG
TTTGCGCTTGGAAAAGGCCCGCTTCGTTGGCTTGACGGTCGAATTCTGGG
GGTGCGTGGAGGGAGCCACGGCAGACGGCAACGCGCGGGATAAACCGCTC
GAGTTTCTGTCGCCGTGGACGGTGCATCCTCACAGGCGTGTGCGTGCGTG
CGTGCGTGCGTGCGTGCGTCGTTGCTCGATTCGATGTTAACTTAGAGGGG
GCGTTCGGAAAATGCTAGGAACCTTTGTATTGTTTCGTGGGAGTCGCTTT
TCTGTGTTTGTTGTTGTTGTTGTTATTGTGTTGCGCGCGCATTTGACGCC
GCATACCAAGTGGCACGGAATGGCGTCCGTATCTTGGTTGGTGTGCTTGG
TCTCGTGTTGAGTTTTGTGATGACGAACAAGATCTATGTTTCCACCTTTC
GCAGGTCGTAAGCACGACCGACTGACCGATCGGTTGTGGCGTCTCTTTTT
TGAGCCGACGGGGAGGGGGTTAGGTAACCACGGAAGGGACCCTTTATCCT
GCTCAGGAGAGCGAGCGGGCTTTGGAGTGCACGTTGCGGCCCCCATCGTT
CGGCCGATTATCTCGTACTAGGTACTAGGTGTGGTTTACTCCATGTTTTA
TGTGTGGATAAGAGAGTAGGGGGTGTTGGGGCGAAACCTATGTAGTTTTG
ACAAAATGCCTGAAACAGTGAAAGGGAGAGTTAACATCAATGTGGTTTGC
GATACGGGAAGTGAGAGGTGCGCACCGTCCGCTTCTAAGATGGAGCGGTG
CGGGATTATTTGGCGTTAAATTGACACCTCTATCATTTTGCCGACGTCTG
GGGGTTTGTGTATGTGTTTTCAGAGCTTGCCCGTGTTTGCGGTGCGTGTC
TTTTTGCTGAAATGCGCTTGGAGACGTCACGATATCTGGTGTTGAAGGTT
CCATCGTACACACGGCCGTCTGGAAGTTATACATGCATGCAGTCTT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1331:1197..13742-

>mRNA_L-elsbetiae_contig1331.2563.1 ID=mRNA_L-elsbetiae_contig1331.2563.1|Name=mRNA_L-elsbetiae_contig1331.2563.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig1331:1197..13742- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCAGTTCCTAAGACCAGCGAAAGCCGCAGAGCGAAGAGCATATCGGC
GTCGCAGGACAATGATGTGGTAGGTTCGGCACCGCCAGCAAGGAGACTAC
CGCCAGAGCGCGAAGGGGCACTAGCTCGATGGCAGTTCCTAAGACCAGCG
AAAGCCGCAGAGCGAAGAGCATATCGGCGTCGCAGGACAATGATGTGGTA
GGTTCGGCACCGCCAGCAAGGAGACTACCGCCAGAGCGCGAAGGGGCACT
AGCTCGGATAAATTCTCGGGCGCAGAGATTCGCGGAGACCAGTCCGACCA
CCAAGGGGCGGGGCAAAATGGTGAAGTTCATGTTTTTGGGAGATCCGGAG
TGTGGCAAGACCGCGATCGTGACTAGGATAAATTCTCGGGCGCAGAGATT
CGCGGAGACCAGTCCGACCACCAAGGGGCGGGGCAAAATGGTGAAGTTCA
TGTTTTTGGGAGATCCGGAGTGTGGCAAGACCGCGATCGTGACTAGGTTT
GTGACGGACTCGTTTAGTCCAACGTACAAGCCCACGATGGACGTGGACTT
CACGCAGTCGAACGTCATGGTCGGGGAGCAGCGGCTGCGGGTGGGGTTGT
GGCAGGCAAGTCGTCGTGGAGGTCGTTGTTGCGGCGTTTGTGACGGACTC
GTTTAGTCCAACGTACAAGCCCACGATGGACGTGGACTTCACGCAGTCGA
ACGTCATGGTCGGGGAGCAGCGGCTGCGGGTGGGGTTGTGGCAGGCAAGT
CGTCGTGGAGGTCGTTGTTGCGGCGTTTCGGAGAAGAAGGAGGGCAGCTT
GGCGACCAACACATTCCGAGGGCTGCACGGTGCCTTCATCGTGGCCGACA
TCGCCAGGCAGGAGACCTTCCACGGGGTGGCAAAGTTCCGGCAGATCATC
GACGAAAAGGTTTCGGAGAAGAAGGAGGGCAGCTTGGCGACCAACACATT
CCGAGGGCTGCACGGTGCCTTCATCGTGGCCGACATCGCCAGGCAGGAGA
CCTTCCACGGGGTGGCAAAGTTCCGGCAGATCATCGACGAAAAGCTCGCG
GAGGTGGGGGCGGGGAGCTTGCCGGTTGTCCTCCTGGCGAACAAGCTCGC
GGAGGTGGGGGCGGGGAGCTTGCCGGTTGTCCTCCTGGCGAACAAGAGCG
ATCGATTGGGGGAGGACGGAGTGTCGTTGAACAAGTCCTCGATGGACAAG
CTTTGCAAGAGGCATCGACTGAACGGCTGAGCGATCGATTGGGGGAGGAC
GGAGTGTCGTTGAACAAGTCCTCGATGGACAAGCTTTGCAAGAGGCATCG
ACTGAACGGCTGGTACGCTACCTCCGCAAAAGACAACACGAACGTCGACT
TGGCCATCAAGGTGGTGTTGCGGCAGGCTTTGAAGGGGACTGCAAAGTAC
GCTACCTCCGCAAAAGACAACACGAACGTCGACTTGGCCATCAAGGTGGT
GTTGCGGCAGGCTTTGAAGGGGACTGCAAAGGCTTCTTTCTCGGAGCTGC
CCCCGCACGACGTCGAGGCGCTGGACGCCGAGGTGGACGGGCTGGACGGG
CCGGGGGCGGACAGGGAGCGGTCCCCGGGGCAGCAGATGCTCAGGGATCA
CCAGTGGTTCGGGACGCAGACCGTGACCGCGAAGCAAGGGTGCGCCTGCG
TGGTCTCGTGAGGCTTCTTTCTCGGAGCTGCCCCCGCACGACGTCGAGGC
GCTGGACGCCGAGGTGGACGGGCTGGACGGGCCGGGGGCGGACAGGGAGC
GGTCCCCGGGGCAGCAGATGCTCAGGGATCACCAGTGGTTCGGGACGCAG
ACCGTGACCGCGAAGCAAGGGTGCGCCTGCGTGGTCTCGTGA
back to top