prot_L-elsbetiae_contig1331.2563.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1331.2563.1
Unique Nameprot_L-elsbetiae_contig1331.2563.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length307
Homology
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: D7FK72_ECTSI (Rab32L, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK72_ECTSI)

HSP 1 Score: 457 bits (1177), Expect = 2.000e-160
Identity = 240/308 (77.92%), Postives = 263/308 (85.39%), Query Frame = 0
Query:    1 MAVPKTSESRRAKSISASQDNDVVG-SAPPARRLPPEREGALARINSRAQRFAETSPTTKGRGK-MVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQRLRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALKGTAKASFSELPPHDVEALDAEVDGLDGPGADRERSPGQQMLRDHQWFGTQTVTAKQGCACVVS 306
            M V K S+SRRAKS S S  + +   SAPP RRLPPEREG++ARINSRAQ+FA+ SP  K  G  MVKFMFLGD ECGKTAIVTRF T +F P YKPTMDVDFTQSNVMVGEQRLRV LWQ          VSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRL+GWYATSAKDN+N+DLAIK VLR+AL+G+A+++F EL   DV+ALD E+  L+GPG+DRERSPGQQ+LRDHQWFGTQ V+ KQGCACVVS
Sbjct:    1 MVVNKVSDSRRAKSTSGSPGDGLPAVSAPPGRRLPPEREGSMARINSRAQKFAD-SPGAKSSGTTMVKFMFLGDSECGKTAIVTRFATGTFDPVYKPTMDVDFTQSNVMVGEQRLRVALWQ----------VSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNSNIDLAIKEVLRRALQGSARSAFGELEQDDVDALDEELTQLNGPGSDRERSPGQQILRDHQWFGTQNVSTKQGCACVVS 297          
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: A0A835YX00_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX00_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.070e-31
Identity = 70/212 (33.02%), Postives = 119/212 (56.13%), Query Frame = 0
Query:   44 INSRAQRFAETSPTTKGRGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQRLRVGLWQASRRGGRCCGVSEKKEGSLATNT--FRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALKGTAKASFSEL 253
            +N R+ R  +      G  K+ K + LGD   GKTA+  RF ++ F P +KPT+ VDF+Q+++ VG Q +R+ LW           ++EKKEG+   N   F+G+HGAFIV DI +  T   + +++ +IDE +A+                      V  +K+++D+LC++++++ W+ATSAK N N++LA+K ++   L G   ++F  +
Sbjct:    1 MNRRSSRAEKYDSPHLGPAKL-KILLLGDSATGKTAVTQRFASNRFDPAHKPTVAVDFSQTSITVGTQMVRLALWN----------LAEKKEGTQQVNGNHFQGVHGAFIVVDITQPHTVAKMLQWKALIDETVAQ----------------------VQFSKATLDRLCEKYQVDSWFATSAKTNVNIELAMKQMVLSVLSGPYHSNFQRV 179          
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: A0A1X2H1Y9_SYNRA (Ras-related protein Rab n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H1Y9_SYNRA)

HSP 1 Score: 119 bits (299), Expect = 5.660e-29
Identity = 69/189 (36.51%), Postives = 108/189 (57.14%), Query Frame = 0
Query:   58 TKGRGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQRL-RVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKL---AEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQAL 242
            T+ R  + K + +GD   GKT+I+ R+V + FS  YK T+ VDF    +  G   + R+ LW  +          +++ G++    ++   GAF+V D+ R  TF GV +++  ID K+   +  G G +PVVLLANKSD L  DG S+N   +DK C+ +    W+ TSAK+NTN+D A +V++ + L
Sbjct:    3 TEVREYLYKILVVGDLGTGKTSIIRRYVHNIFSTNYKSTIGVDFALKVIQWGPDIIVRLQLWDIA---------GQERFGNMTRVYYKEALGAFVVYDVTRPNTFEGVTRWKNDIDSKVRLPSSWGGGPIPVVLLANKSD-LKSDGQSVNAGELDKFCEENGFMQWFETSAKNNTNIDDAARVLIEKIL 181          
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: A0A8C4ZL11_GADMO (Ras-related protein Rab n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4ZL11_GADMO)

HSP 1 Score: 113 bits (283), Expect = 1.590e-26
Identity = 59/179 (32.96%), Postives = 98/179 (54.75%), Query Frame = 0
Query:   64 MVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQRLRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQAL 242
            + K + +GD   GKTA++ R+V  ++S  Y+ T+ VDF    +    + +R+ LW  +          +++ G++    +R   GAFIV D  R  TF  V K+++ +D KL      S+  VLLANK D+  ++ ++ N   MD+ CK H   GW+ TSAKDNTN++ A   +++  +
Sbjct:   22 LYKVLVIGDLGVGKTAVIRRYVHQTYSANYRATIGVDFALKVLNWDSETIRLQLWDIA---------GQERFGNMTRVYYREAMGAFIVFDATRPTTFEAVTKWKEDLDSKLMLANGRSIATVLLANKCDQGRDEFINNNGVKMDQFCKEHGFVGWFETSAKDNTNINEAANFLVKHIM 191          
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: A0A8H7UMP0_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UMP0_9FUNG)

HSP 1 Score: 117 bits (292), Expect = 1.470e-25
Identity = 78/225 (34.67%), Postives = 119/225 (52.89%), Query Frame = 0
Query:   61 RGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVG-EQRLRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLA---EVGAGSLPVVLLANKSDRLGED-GVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALKGTAKASFSELPPHDVEALDAEVDGLDGPGADRERSPG 280
            R  + KF+ +GD   GKT+I+ R+V + FS  YK T+ VDF    +    E  +R+ LW  +          +++ G++    ++   GAF+V D+ R +TF GV K++  +D K++     G G++PVVLLANKSD +GE  G   N + MD  CK +    W+ TSAKDNTN+D A + ++   L G  +     L  HD E  +     L     D+ R+ G
Sbjct:  484 REYLYKFLVVGDLGTGKTSIIKRYVHNIFSMHYKSTIGVDFALKVIQWSPEIVVRLQLWDIA---------GQERFGNMTRVYYKEALGAFVVYDVTRPQTFEGVRKWKADLDSKISLPEAWGGGNIPVVLLANKSDLIGEGHGQHANPTEMDTFCKENGFIKWFETSAKDNTNIDEAARHLVTTIL-GIER---EHLDRHDAENFENNNQQLRVDSRDKNRNDG 695          
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: A0A3B3R5J7_9TELE (Ras-related protein Rab n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3R5J7_9TELE)

HSP 1 Score: 108 bits (271), Expect = 6.820e-25
Identity = 61/181 (33.70%), Postives = 101/181 (55.80%), Query Frame = 0
Query:   64 MVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQR--LRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQAL 242
            + K + +GD   GKT+I+ R+V   FS  Y+ T+ VDF    V+  + R  +R+ LW  +          +++ G++    +R   GA +V D+ R  TF  V K++  +D K++      +PVVLLANKSD+   +G+S     +D  CK H   GW+ TSAK+NTN++ A++ +++  L
Sbjct:    6 LFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALK-VLTWDNRTVIRLQLWDIA---------GQERYGNMTRVYYREAVGALLVFDVTRTSTFQAVLKWKADLDGKVSLANGKPVPVVLLANKSDQ-SREGLSSQLPKLDAFCKEHGFVGWFETSAKENTNINAAVRCLVQNIL 175          
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: UPI001D065B66 (ras-related protein Rab-38 isoform X3 n=2 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D065B66)

HSP 1 Score: 109 bits (272), Expect = 1.180e-24
Identity = 63/184 (34.24%), Postives = 97/184 (52.72%), Query Frame = 0
Query:   61 RGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQR-LRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALK 243
            R  + K + +GD   GKT+I+ R+V   FS  Y+ T+ VDF    +   E   +R+ LW  +          +++ G++    F+   GAFIV D  R  TF  V  ++  +D K+       +P VLLANK D+  ++G+  N   MD+ CK      W+ATSAKDN N+D A KV++ + L+
Sbjct:   46 RDHLYKVLVIGDLATGKTSIIKRYVHRFFSQNYRATIGVDFALKVINWDENTVIRLQLWDIA---------GQERYGNMTRVYFKEAVGAFIVFDCTRMNTFESVKNWKTDLDSKVLLADGSKIPCVLLANKCDQ-PKEGIVNNSHQMDEYCKTEGFAAWFATSAKDNINIDEAAKVLIERILE 219          
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: UPI001E275648 (ras-related protein Rab-32 isoform X2 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E275648)

HSP 1 Score: 110 bits (274), Expect = 1.510e-24
Identity = 63/184 (34.24%), Postives = 98/184 (53.26%), Query Frame = 0
Query:   61 RGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQR-LRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALK 243
            R  + K + +GD   GKT+I+ R+V   FS  Y+ T+ VDF    +   E   +R+ LW  +          +++ G++    F+   GAFIV D  R  TF  V  ++  +D K+       +P VLLANK D+  ++G+  N S MD+ CK      W+ATSAKDN N+D A K+++ + L+
Sbjct:   90 RDHLYKVLVIGDLATGKTSIIKRYVHRFFSQNYRATIGVDFALKVINWDENTVIRLQLWDIA---------GQERYGNMTRVYFKEAVGAFIVFDCTRVNTFESVKNWKTDLDSKVLLADGSKIPCVLLANKCDQ-PKEGIVNNNSQMDEYCKTEGFAAWFATSAKDNINIDEAAKILIEKILE 263          
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: UPI001D0797D1 (ras-related protein Rab-38 isoform X2 n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D0797D1)

HSP 1 Score: 109 bits (273), Expect = 2.060e-24
Identity = 65/203 (32.02%), Postives = 103/203 (50.74%), Query Frame = 0
Query:   42 ARINSRAQRFAETSPTTKGRGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQR-LRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALK 243
            +R +   Q  +      + R  + K + +GD   GKT+I+ R+V   FS  Y+ T+ VDF    +   E   +R+ LW  +          +++ G++    F+   GAFIV D  R  TF  V  ++  +D K+       +P VLLANK D+  ++G+  N   MD+ CK      W+ATSAKDN N+D A KV++ + L+
Sbjct:   70 SRTSGHNQLSSANQTQIRRRDHLYKVLVIGDLATGKTSIIKRYVHRFFSQNYRATIGVDFALKVINWDENTVIRLQLWDIA---------GQERYGNMTRVYFKEAVGAFIVFDCTRMNTFESVKNWKTDLDSKVLLADGSKIPCVLLANKCDQ-PKEGIVNNSHQMDEYCKTEGFAAWFATSAKDNINIDEAAKVLIERILE 262          
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Match: UPI001E27547F (ras-related protein Rab-32 isoform X1 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E27547F)

HSP 1 Score: 110 bits (274), Expect = 3.440e-24
Identity = 63/184 (34.24%), Postives = 98/184 (53.26%), Query Frame = 0
Query:   61 RGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVDFTQSNVMVGEQR-LRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALK 243
            R  + K + +GD   GKT+I+ R+V   FS  Y+ T+ VDF    +   E   +R+ LW  +          +++ G++    F+   GAFIV D  R  TF  V  ++  +D K+       +P VLLANK D+  ++G+  N S MD+ CK      W+ATSAKDN N+D A K+++ + L+
Sbjct:  137 RDHLYKVLVIGDLATGKTSIIKRYVHRFFSQNYRATIGVDFALKVINWDENTVIRLQLWDIA---------GQERYGNMTRVYFKEAVGAFIVFDCTRVNTFESVKNWKTDLDSKVLLADGSKIPCVLLANKCDQ-PKEGIVNNNSQMDEYCKTEGFAAWFATSAKDNINIDEAAKILIEKILE 310          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1331.2563.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK72_ECTSI2.000e-16077.92Rab32L, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
A0A835YX00_9STRA1.070e-3133.02P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1X2H1Y9_SYNRA5.660e-2936.51Ras-related protein Rab n=1 Tax=Syncephalastrum ra... [more]
A0A8C4ZL11_GADMO1.590e-2632.96Ras-related protein Rab n=1 Tax=Gadus morhua TaxID... [more]
A0A8H7UMP0_9FUNG1.470e-2534.67Uncharacterized protein n=1 Tax=Umbelopsis vinacea... [more]
A0A3B3R5J7_9TELE6.820e-2533.70Ras-related protein Rab n=2 Tax=Paramormyrops king... [more]
UPI001D065B661.180e-2434.24ras-related protein Rab-38 isoform X3 n=2 Tax=Cocc... [more]
UPI001E2756481.510e-2434.24ras-related protein Rab-32 isoform X2 n=1 Tax=Harm... [more]
UPI001D0797D12.060e-2432.02ras-related protein Rab-38 isoform X2 n=1 Tax=Cocc... [more]
UPI001E27547F3.440e-2434.24ras-related protein Rab-32 isoform X1 n=1 Tax=Harm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 65..86
score: 32.91
coord: 219..241
score: 30.04
coord: 181..194
score: 35.71
coord: 88..104
score: 28.44
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 62..244
e-value: 6.4E-5
score: -37.2
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 65..244
e-value: 4.5E-12
score: 41.0
NoneNo IPR availableGENE3D3.40.50.300coord: 54..260
e-value: 6.8E-32
score: 112.3
NoneNo IPR availablePANTHERPTHR24073:SF839RAS-RELATED PROTEIN RAB-38coord: 62..248
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 62..248
NoneNo IPR availablePROSITEPS51419RABcoord: 55..303
score: 18.681
IPR001806Small GTPasePFAMPF00071Rascoord: 66..242
e-value: 2.6E-22
score: 79.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 62..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1331contigL-elsbetiae_contig1331:2236..13742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1331.2563.1mRNA_L-elsbetiae_contig1331.2563.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1331 1197..13742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1331.2563.1 ID=prot_L-elsbetiae_contig1331.2563.1|Name=mRNA_L-elsbetiae_contig1331.2563.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp
MAVPKTSESRRAKSISASQDNDVVGSAPPARRLPPEREGALARINSRAQR
FAETSPTTKGRGKMVKFMFLGDPECGKTAIVTRFVTDSFSPTYKPTMDVD
FTQSNVMVGEQRLRVGLWQASRRGGRCCGVSEKKEGSLATNTFRGLHGAF
IVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGV
SLNKSSMDKLCKRHRLNGWYATSAKDNTNVDLAIKVVLRQALKGTAKASF
SELPPHDVEALDAEVDGLDGPGADRERSPGQQMLRDHQWFGTQTVTAKQG
CACVVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase