mRNA_L-elsbetiae_contig13283.2545.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13283.2545.1 vs. uniprot
Match: A0A6H5JXB1_9PHAE (Ku domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXB1_9PHAE) HSP 1 Score: 197 bits (502), Expect = 1.700e-58 Identity = 99/123 (80.49%), Postives = 108/123 (87.80%), Query Frame = 1 Query: 1 SLQTEVGVVLFGLPSTETANKLNDADNDDYLGVKEYCMLDKGSVKLLRKVAAIDVPDADSTEPAMGDLLDAMVVGMHAIRSRTLKKKYLRHVYLLTDAATPVQEASQLPEIVGMYTDATMECR 369 S Q EVGVVLFGLP ETAN+LN+A+N DYLGVKEYC+LDKGSV +LRKV A+D+PD S EPAMGDLLDAMVVGMH IRSRTLKKKY+RHVYLLTDAATPV E SQL +IVGMYTD TMECR Sbjct: 23 SKQHEVGVVLFGLPEAETANQLNEAENSDYLGVKEYCLLDKGSVAVLRKVEAMDIPD--SGEPAMGDLLDAMVVGMHMIRSRTLKKKYMRHVYLLTDAATPVAEVSQLGDIVGMYTDPTMECR 143
BLAST of mRNA_L-elsbetiae_contig13283.2545.1 vs. uniprot
Match: A0A8K1C5B8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5B8_PYTOL) HSP 1 Score: 64.3 bits (155), Expect = 1.620e-9 Identity = 43/112 (38.39%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 13 EVGVVLFGLPSTETANKLN-DADNDDYLGVKEYCMLDKGSVKLLRKVAAIDVPDADSTEPAMG-DLLDAMVVGMHAIRSRTLKKKYLRHVYLLTDAATPVQEASQLPEIVGM 342 EVGVVLFG + ET+N+LN D D+Y V +D ++ + K+ I P AD PA+ DLL+ ++V + + RT KKY + + +LTDAA+ +++AS + +V M Sbjct: 62 EVGVVLFG--TEETSNQLNEDQGEDEYTNVTVLSDIDTPTLSVCEKLQTI-TPTAD---PAVKVDLLNGLIVALDLLFRRTEGKKYEKRLLVLTDAASKIEDASDIESVVEM 167
BLAST of mRNA_L-elsbetiae_contig13283.2545.1 vs. uniprot
Match: A0A7R9UAZ4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAZ4_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.040e-8 Identity = 35/93 (37.63%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 13 EVGVVLFGLPSTETANKLNDADNDDYLGVKEYCMLDKGSVKLLRKVAAIDVPDADSTEPAMGDLLDAMVVGMHAIRSRTLKKKYLRHVYLLTD 291 E+G+VL G + +T N++N ++Y V E ML K S+ LR V + + TE GD++D + VG+ +R RTLK+KY+R ++L +D Sbjct: 46 EIGLVLVG--TADTDNRVNREIPEEYRHVTELSMLKKCSLAFLRDVQTLSL---QRTERVDGDVIDGVFVGLTMLRDRTLKRKYVRKLWLFSD 133
BLAST of mRNA_L-elsbetiae_contig13283.2545.1 vs. uniprot
Match: A0A2D4BWM7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWM7_PYTIN) HSP 1 Score: 62.0 bits (149), Expect = 1.080e-8 Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 13 EVGVVLFGLPSTETANKLN-DADNDDYLGVKEYCMLDKGSVKLLRKVAAIDVPDADSTEPAMGDLLDAMVVGMHAIRSRTLKKKYLRHVYLLTDAATPVQEASQLPEIVGM 342 EVG+VLFG S ET N LN + +Y V LD ++ + ++ + P D++ DLLD ++V + + RT KKY R + L+TDAA+P+++A+ + +V M Sbjct: 590 EVGIVLFG--SAETKNDLNAEXGESEYTNVYVLSDLDTPTLSMCERLHQLR-PTVDASVKV--DLLDGLIVALDLLYRRTEGKKYDRRLLLITDAASPIEDAADIESVVQM 695
BLAST of mRNA_L-elsbetiae_contig13283.2545.1 vs. uniprot
Match: A0A3R7A572_9STRA (VWFA domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7A572_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.400e-7 Identity = 33/110 (30.00%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 13 EVGVVLFGLPSTETANKLNDADNDDYLGVKEYCMLDKGSVKLLRKVAAIDVPDADSTEPAMGDLLDAMVVGMHAIRSRTLKKKYLRHVYLLTDAATPVQEASQLPEIVGM 342 EVG+V++G T+ N+LN D ++Y V + + L +++ A++ ++ PA D+LD ++V + + RT KKY + + ++TDAATP+ S + + M Sbjct: 49 EVGIVMYGTEGTD--NQLNSDDGNNYKNVTVLSSIAPVTFDLAKQLQAMEAASVET--PA--DVLDGIIVALDLVIRRTDNKKYDKRLVVITDAATPINNPSDMEVVCTM 152
BLAST of mRNA_L-elsbetiae_contig13283.2545.1 vs. uniprot
Match: A0A7S2WB06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB06_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 2.900e-7 Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = 1 Query: 1 SLQTEVGVVLFGLPSTETANKLNDADNDDYLGVKEYCMLDKGSVKLLRKVAAIDVPDADSTEPAMGDLLDAMVVGMHAIRSRTLKKKYLRHVYLLTDAATPVQEASQLPEIV 336 S Q EVGVVL G T +N+L A D++ V LD+ S+ L + VP S+ D++D +V+G+ + RT+ KKYLR VYL+T A ++ + I+ Sbjct: 66 SKQHEVGVVLCGTEGT--SNELAVAGQYDHITV--LAQLDRPSMALTTALETEAVPSEASS-----DIIDGLVIGVLMLSQRTMNKKYLRSVYLVTAAENRIESVGDMDSII 168
BLAST of mRNA_L-elsbetiae_contig13283.2545.1 vs. uniprot
Match: A0A024TR07_9STRA (VWFA domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TR07_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 4.300e-7 Identity = 33/110 (30.00%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 13 EVGVVLFGLPSTETANKLNDADNDDYLGVKEYCMLDKGSVKLLRKVAAIDVPDADSTEPAMGDLLDAMVVGMHAIRSRTLKKKYLRHVYLLTDAATPVQEASQLPEIVGM 342 EVG+V++G T+ N+LN D ++Y V + + L +++ A++ ++ PA D+LD ++V + + RT KKY + + ++TDAATP+ S + + M Sbjct: 57 EVGIVMYGTEGTD--NQLNSDDGNNYKNVTVLSSIAPVTFDLAKQLQAMEAASVET--PA--DVLDGIIVALDLVIRRTDNKKYDKRLVVITDAATPINNPSDMEVVCTM 160
BLAST of mRNA_L-elsbetiae_contig13283.2545.1 vs. uniprot
Match: A0A418AJ28_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AJ28_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.020e-6 Identity = 33/110 (30.00%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 13 EVGVVLFGLPSTETANKLNDADNDDYLGVKEYCMLDKGSVKLLRKVAAIDVPDADSTEPAMGDLLDAMVVGMHAIRSRTLKKKYLRHVYLLTDAATPVQEASQLPEIVGM 342 EVG+V++G T+ N+LN D ++Y V + S+ L +++ A++ ++ PA D+LD ++V + + RT KKY + + ++TDAAT + S + + M Sbjct: 40 EVGIVMYGTEGTD--NQLNSDDGNNYKNVTVLSSITPVSLDLAKQLQAMEAASVET--PA--DVLDGIIVALDLVIRRTDNKKYDKRLVVITDAATRINNPSDMEVVCTM 143
BLAST of mRNA_L-elsbetiae_contig13283.2545.1 vs. uniprot
Match: A0A397EXU4_9STRA (VWFA domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EXU4_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 4.220e-6 Identity = 33/110 (30.00%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 13 EVGVVLFGLPSTETANKLNDADNDDYLGVKEYCMLDKGSVKLLRKVAAIDVPDADSTEPAMGDLLDAMVVGMHAIRSRTLKKKYLRHVYLLTDAATPVQEASQLPEIVGM 342 EVG+V++G T+ N+LN D++ Y V + ++ L ++V A++ ++ PA D+LD ++V + + RT KKY + + ++TDAAT + S + + M Sbjct: 49 EVGIVMYGTEGTD--NQLNADDDNSYKHVTVVSSVAPVTIDLAKQVLAMEAASVET--PA--DVLDGIIVALDLMIRRTDNKKYDKRLVVITDAATRINNPSDMEVVCTM 152
BLAST of mRNA_L-elsbetiae_contig13283.2545.1 vs. uniprot
Match: W4GEM7_9STRA (VWFA domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GEM7_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 7.000e-6 Identity = 33/110 (30.00%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 13 EVGVVLFGLPSTETANKLNDADNDDYLGVKEYCMLDKGSVKLLRKVAAIDVPDADSTEPAMGDLLDAMVVGMHAIRSRTLKKKYLRHVYLLTDAATPVQEASQLPEIVGM 342 EVG+V++G T+ N+LN D++ Y V + ++ L ++V A++ ++ PA D+LD ++V + + RT KKY + + ++TDAAT + S + + M Sbjct: 57 EVGIVMYGTEGTD--NQLNADDDNSYKHVTVVSSVAPVTIDLAKQVLAMEAASVET--PA--DVLDGIIVALDLMIRRTDNKKYDKRLVVITDAATRINNPSDMEVVCTM 160 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13283.2545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13283.2545.1 >prot_L-elsbetiae_contig13283.2545.1 ID=prot_L-elsbetiae_contig13283.2545.1|Name=mRNA_L-elsbetiae_contig13283.2545.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=123bp SLQTEVGVVLFGLPSTETANKLNDADNDDYLGVKEYCMLDKGSVKLLRKVback to top mRNA from alignment at L-elsbetiae_contig13283:1851..4505+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13283.2545.1 ID=mRNA_L-elsbetiae_contig13283.2545.1|Name=mRNA_L-elsbetiae_contig13283.2545.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2655bp|location=Sequence derived from alignment at L-elsbetiae_contig13283:1851..4505+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13283:1851..4505+ >mRNA_L-elsbetiae_contig13283.2545.1 ID=mRNA_L-elsbetiae_contig13283.2545.1|Name=mRNA_L-elsbetiae_contig13283.2545.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=738bp|location=Sequence derived from alignment at L-elsbetiae_contig13283:1851..4505+ (Laminarionema elsbetiae ELsaHSoW15)back to top |