mRNA_L-elsbetiae_contig13181.2488.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13181.2488.1 vs. uniprot
Match: D7G0A1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0A1_ECTSI) HSP 1 Score: 137 bits (346), Expect = 3.210e-36 Identity = 60/69 (86.96%), Postives = 65/69 (94.20%), Query Frame = 1 Query: 1 PKQGGCFEFDILLPPDYPNKPPEVHFLTTGNGRVRFNPNLYKTGKVCLSLLGTWSGPGWNAKTSTLLQV 207 P + GCFEFDILLPPDYPN PP+VHFLTTG+GRVRFNPNLY+TGKVCLSLLGTW+GPGWN KTSTLLQV Sbjct: 757 PYECGCFEFDILLPPDYPNSPPKVHFLTTGSGRVRFNPNLYQTGKVCLSLLGTWAGPGWNPKTSTLLQV 825
BLAST of mRNA_L-elsbetiae_contig13181.2488.1 vs. uniprot
Match: I0YLH9_COCSC (UBC-like protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YLH9_COCSC) HSP 1 Score: 124 bits (310), Expect = 1.710e-34 Identity = 56/69 (81.16%), Postives = 58/69 (84.06%), Query Frame = 1 Query: 1 PKQGGCFEFDILLPPDYPNKPPEVHFLTTGNGRVRFNPNLYKTGKVCLSLLGTWSGPGWNAKTSTLLQV 207 P GCF FDILLPP+YPNKPPEV FLTTG GRVRFNPNLY GKVCLSLLGTWSGP W+ TSTLLQV Sbjct: 11 PYANGCFLFDILLPPEYPNKPPEVQFLTTGAGRVRFNPNLYNCGKVCLSLLGTWSGPSWDPGTSTLLQV 79
BLAST of mRNA_L-elsbetiae_contig13181.2488.1 vs. uniprot
Match: A0A7R9W000_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9W000_9CHLO) HSP 1 Score: 121 bits (303), Expect = 4.870e-32 Identity = 54/65 (83.08%), Postives = 55/65 (84.62%), Query Frame = 1 Query: 13 GCFEFDILLPPDYPNKPPEVHFLTTGNGRVRFNPNLYKTGKVCLSLLGTWSGPGWNAKTSTLLQV 207 G F FDILLPPDYPN PP+VHFLTTG GRVRFNPNLY GKVCLSLLGTWSGP W TSTLLQV Sbjct: 111 GAFVFDILLPPDYPNHPPQVHFLTTGEGRVRFNPNLYNCGKVCLSLLGTWSGPSWQPGTSTLLQV 175
BLAST of mRNA_L-elsbetiae_contig13181.2488.1 vs. uniprot
Match: A0A7S0N848_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N848_9CRYP) HSP 1 Score: 112 bits (280), Expect = 5.560e-30 Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 1 Query: 1 PKQGGCFEFDILLPPDYPNKPPEVHFLTTGNGRVRFNPNLYKTGKVCLSLLGTWSGPGWNAKTSTLLQV 207 P G FEFD+LLPPDYPN PP+V TTG GRVRFNPNLY G VCLSLLGTWSGPGW S+LLQV Sbjct: 27 PYANGLFEFDVLLPPDYPNVPPQVRLTTTGGGRVRFNPNLYADGTVCLSLLGTWSGPGWEPGRSSLLQV 95
BLAST of mRNA_L-elsbetiae_contig13181.2488.1 vs. uniprot
Match: A0A835YXY9_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXY9_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.350e-29 Identity = 50/65 (76.92%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 13 GCFEFDILLPPDYPNKPPEVHFLTTGNGRVRFNPNLYKTGKVCLSLLGTWSGPGWNAKTSTLLQV 207 G FEFDI LP YP PEVHFLTTGNG VRFNPNLY +GKVCLSLLGTW GPGW STLLQV Sbjct: 2 GLFEFDIRLPQRYPVVAPEVHFLTTGNGSVRFNPNLYNSGKVCLSLLGTWRGPGWEPNKSTLLQV 66
BLAST of mRNA_L-elsbetiae_contig13181.2488.1 vs. uniprot
Match: A0A2R6WNY5_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WNY5_MARPO) HSP 1 Score: 117 bits (292), Expect = 6.270e-29 Identity = 52/69 (75.36%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 1 PKQGGCFEFDILLPPDYPNKPPEVHFLTTGNGRVRFNPNLYKTGKVCLSLLGTWSGPGWNAKTSTLLQV 207 P Q G F FDI LPPDYP PP VHFLTTG G+VRFNPNLY +GK+CLSLLGTWSGPGW STLLQV Sbjct: 696 PYQNGLFMFDIFLPPDYPQVPPHVHFLTTGGGKVRFNPNLYDSGKICLSLLGTWSGPGWVPGKSTLLQV 764
BLAST of mRNA_L-elsbetiae_contig13181.2488.1 vs. uniprot
Match: A0A5J4YG42_9CHLO (UBC core domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YG42_9CHLO) HSP 1 Score: 116 bits (290), Expect = 8.410e-29 Identity = 51/69 (73.91%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 1 PKQGGCFEFDILLPPDYPNKPPEVHFLTTGNGRVRFNPNLYKTGKVCLSLLGTWSGPGWNAKTSTLLQV 207 P GCF FDI LP +YPN PP VHFLTTG GR+RFNPNLY+ GKVCLSLLGTWSGP W+ STLLQV Sbjct: 386 PYANGCFLFDIFLPANYPNAPPSVHFLTTGGGRIRFNPNLYECGKVCLSLLGTWSGPSWDPTHSTLLQV 454
BLAST of mRNA_L-elsbetiae_contig13181.2488.1 vs. uniprot
Match: A0A2K1JHY5_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JHY5_PHYPA) HSP 1 Score: 116 bits (290), Expect = 1.170e-28 Identity = 52/69 (75.36%), Postives = 54/69 (78.26%), Query Frame = 1 Query: 1 PKQGGCFEFDILLPPDYPNKPPEVHFLTTGNGRVRFNPNLYKTGKVCLSLLGTWSGPGWNAKTSTLLQV 207 P Q G F FDI LP DYP PP VHFLTTG G+VRFNPNLY TGK+CLSLLGTWSGPGW STLLQV Sbjct: 699 PYQNGIFLFDIFLPADYPQVPPSVHFLTTGGGKVRFNPNLYDTGKICLSLLGTWSGPGWTPGKSTLLQV 767
BLAST of mRNA_L-elsbetiae_contig13181.2488.1 vs. uniprot
Match: A0A2P6TCN2_CHLSO (Ubiquitin conjugating enzyme family n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TCN2_CHLSO) HSP 1 Score: 114 bits (286), Expect = 3.910e-28 Identity = 50/65 (76.92%), Postives = 54/65 (83.08%), Query Frame = 1 Query: 13 GCFEFDILLPPDYPNKPPEVHFLTTGNGRVRFNPNLYKTGKVCLSLLGTWSGPGWNAKTSTLLQV 207 G F FDILLPPDYPN+PP+V FLTTG GRVR NPNLY+ GKVCLSLLGTW+GP W STLLQV Sbjct: 528 GAFAFDILLPPDYPNRPPQVQFLTTGGGRVRLNPNLYENGKVCLSLLGTWAGPSWQPGQSTLLQV 592
BLAST of mRNA_L-elsbetiae_contig13181.2488.1 vs. uniprot
Match: A0A7S1ZIC0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZIC0_TRICV) HSP 1 Score: 113 bits (283), Expect = 4.900e-28 Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 1 PKQGGCFEFDILLPPDYPNKPPEVHFLTTGNGRVRFNPNLYKTGKVCLSLLGTWSGPGWNAKTSTLLQV 207 P + G FEFDI LP YPN PP+VH +TTG VRFNPNLY+ GKVCLSLLGTWSGPGW +TSTLLQV Sbjct: 274 PYENGVFEFDIFLPESYPNDPPKVHLITTGKNTVRFNPNLYQEGKVCLSLLGTWSGPGWIPETSTLLQV 342 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13181.2488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13181.2488.1 >prot_L-elsbetiae_contig13181.2488.1 ID=prot_L-elsbetiae_contig13181.2488.1|Name=mRNA_L-elsbetiae_contig13181.2488.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=69bp PKQGGCFEFDILLPPDYPNKPPEVHFLTTGNGRVRFNPNLYKTGKVCLSLback to top mRNA from alignment at L-elsbetiae_contig13181:4871..5077+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13181.2488.1 ID=mRNA_L-elsbetiae_contig13181.2488.1|Name=mRNA_L-elsbetiae_contig13181.2488.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=207bp|location=Sequence derived from alignment at L-elsbetiae_contig13181:4871..5077+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13181:4871..5077+ >mRNA_L-elsbetiae_contig13181.2488.1 ID=mRNA_L-elsbetiae_contig13181.2488.1|Name=mRNA_L-elsbetiae_contig13181.2488.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=414bp|location=Sequence derived from alignment at L-elsbetiae_contig13181:4871..5077+ (Laminarionema elsbetiae ELsaHSoW15)back to top |