mRNA_L-elsbetiae_contig1302.2396.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1302.2396.1 vs. uniprot
Match: A0A6H5KD01_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD01_9PHAE) HSP 1 Score: 142 bits (359), Expect = 1.280e-35 Identity = 74/93 (79.57%), Postives = 81/93 (87.10%), Query Frame = 2 Query: 242 AAAAADRLQRESLNQRLAMTERRFLSDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLSLAQQQVHVAAACVSDAAAFLAGEEGK 520 AA AA L+ LN+RLAMTERRFL DEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDL LA++QVHVAAA + DAA FL G+EG+ Sbjct: 695 AAEAAHWLEVADLNERLAMTERRFLVDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLELAKEQVHVAAARIEDAATFLTGDEGR 787
BLAST of mRNA_L-elsbetiae_contig1302.2396.1 vs. uniprot
Match: A0A7S2BCC7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCC7_9STRA) HSP 1 Score: 118 bits (295), Expect = 4.410e-30 Identity = 55/79 (69.62%), Postives = 68/79 (86.08%), Query Frame = 2 Query: 275 SLNQRLAMTERRFLSDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLSLAQQQVHVAAACVSDAAAFLAGE 511 +LN+RL++TERRFL+++GLP RQWF+HVLQAPG+YLGYAAE FPG++QAL DGD AQ QV VAA CV+DAA +L GE Sbjct: 81 ALNERLSLTERRFLAEDGLPSRQWFKHVLQAPGMYLGYAAEPFPGVSQALDDGDADAAQAQVAVAAICVTDAAQYLVGE 159
BLAST of mRNA_L-elsbetiae_contig1302.2396.1 vs. uniprot
Match: W7TMG7_9STRA (Glutamate carboxypeptidase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMG7_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.390e-24 Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 2 Query: 275 SLNQRLAMTERRFLSDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLSLAQQQVHVAAACVSDAAAFLAGEEGKGA*PMSRGRRGENI 562 +LN RLA TERRF + EGLP R+WF+HVLQAPGLYLGYA SFPG+TQALSDGD LAQ+QV VAA V AAA+LA + +G GR GE + Sbjct: 653 ALNDRLAFTERRFCAKEGLPRRKWFKHVLQAPGLYLGYAGVSFPGVTQALSDGDWELAQRQVWVAAERVGTAAAYLAWGDREG------GRGGEGV 742
BLAST of mRNA_L-elsbetiae_contig1302.2396.1 vs. uniprot
Match: A0A7R9ZMT0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZMT0_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 7.690e-20 Identity = 48/78 (61.54%), Postives = 58/78 (74.36%), Query Frame = 2 Query: 272 ESLNQRLAMTERRFL-SDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLSLAQQQVHVAAACVSDAAAFL 502 + N+++ M ER FL D GLP R WF+HVLQAPG++LGYAAE+FPGI QAL DGD LA+QQV VAA V AA F+ Sbjct: 104 DECNEKITMVEREFLIPDGGLPRRPWFKHVLQAPGMHLGYAAEAFPGIQQALDDGDWDLAKQQVKVAADRVQAAADFM 181
BLAST of mRNA_L-elsbetiae_contig1302.2396.1 vs. uniprot
Match: A0A7S0Y887_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y887_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.770e-18 Identity = 51/99 (51.52%), Postives = 65/99 (65.66%), Query Frame = 2 Query: 206 EGKTLPRAELPAAAAAADRLQRESLNQRLAMTERRFLSDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLSLAQQQVHVAAACVSDAAAFL 502 E L +++ P +A+ + Q E N++L +TER FL D+GLPGR WFRH LQAPGL LGYAAESFPGI QAL + LAQ Q+ A ++ AA L Sbjct: 120 ESAELAKSKSPLDSASELKEQVEICNEKLGLTERFFLLDDGLPGRPWFRHCLQAPGLDLGYAAESFPGIQQALDESRYVLAQDQIDKATERIAAAAENL 218
BLAST of mRNA_L-elsbetiae_contig1302.2396.1 vs. uniprot
Match: A0A7S1GXP9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GXP9_HEMAN) HSP 1 Score: 86.3 bits (212), Expect = 9.130e-18 Identity = 45/77 (58.44%), Postives = 52/77 (67.53%), Query Frame = 2 Query: 272 ESLNQRLAMTERRFLSDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLSLAQQQVHVAAACVSDAAAFL 502 ++LN L ER FLS EGLPGR+WF HVLQAP LY+GY A+ +PGI QA+ DGD LA QV V A V A A L Sbjct: 52 KALNDALYTMERGFLSHEGLPGRKWFLHVLQAPALYMGYGADPYPGIAQAMRDGDWDLASDQVKVVADRVLAAEALL 128
BLAST of mRNA_L-elsbetiae_contig1302.2396.1 vs. uniprot
Match: L1J998_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J998_GUITC) HSP 1 Score: 91.3 bits (225), Expect = 1.100e-17 Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 2 Query: 278 LNQRLAMTERRFLSDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLSLAQQQVHVAAACVSDAAAFL 502 LN+ + TER FL GLPGR+WFRH+LQAPGLYLGY A+ FPGI QA+ DGD LAQ+Q A V A++ L Sbjct: 658 LNEAMRRTERAFLDPAGLPGRKWFRHILQAPGLYLGYGADMFPGICQAIRDGDAKLAQEQATRCAGVVKHASSVL 732
BLAST of mRNA_L-elsbetiae_contig1302.2396.1 vs. uniprot
Match: A0A7S0GWE9_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GWE9_9EUKA) HSP 1 Score: 90.5 bits (223), Expect = 2.010e-17 Identity = 49/93 (52.69%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 230 ELPAAAAAADRLQRESLNQRLAMTERRFLSDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLSLAQQQVHVAAACVSDAAAFLAG 508 E+ A + A + +L+ RLA TERRFLS+ GLP R+WF+HVLQAPGLY GY ++ FPG+ L + + A QQV VAA VS AAA+L+G Sbjct: 622 EIAARSVGAYDIDHHTLDDRLAFTERRFLSESGLPHRKWFKHVLQAPGLYKGYGSDVFPGVIHELREKNFDGAFQQVKVAAKRVSAAAAYLSG 714
BLAST of mRNA_L-elsbetiae_contig1302.2396.1 vs. uniprot
Match: A0A7S4UYA3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UYA3_9DINO) HSP 1 Score: 80.9 bits (198), Expect = 6.400e-16 Identity = 50/98 (51.02%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 224 RAELPAAAAAADRLQRES---LNQRLAMTERRFLSDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLSLAQQQVHVAAACVSDAAAFLAG 508 +AEL AAAA ++E+ LN RLA+TER FL EGLPGR+WFRH LQAP GYA + P + +AL D D A + AA VS A+AFL G Sbjct: 18 QAELEAAAAMLSPGRQEAVAALNDRLALTERLFLLPEGLPGRKWFRHALQAPANDRGYAFQKLPAVAEALRDCDREAAVAGLEATAAAVSRASAFLGG 115
BLAST of mRNA_L-elsbetiae_contig1302.2396.1 vs. uniprot
Match: A0A812TNU8_SYMPI (LAMP1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812TNU8_SYMPI) HSP 1 Score: 85.1 bits (209), Expect = 1.460e-15 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 2 Query: 242 AAAAADRLQR---------ESLNQRLAMTERRFLSDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLSLAQQQVHVAAACVSDAAAFL 502 A+A ADRL+R + N R+ + ER FL + GLPGR+WFRH LQAPGLY GY A++FPGI +A+S + LAQ Q+ A + AAA + Sbjct: 614 ASAEADRLRRLGPSAFHEVVAFNNRIGLLERSFLMESGLPGRKWFRHCLQAPGLYTGYGAKTFPGINEAISAEEWDLAQSQIKACAQRIEAAAASI 709 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1302.2396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1302.2396.1 >prot_L-elsbetiae_contig1302.2396.1 ID=prot_L-elsbetiae_contig1302.2396.1|Name=mRNA_L-elsbetiae_contig1302.2396.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=78bp MTERRFLSDEGLPGRQWFRHVLQAPGLYLGYAAESFPGITQALSDGDLSLback to top mRNA from alignment at L-elsbetiae_contig1302:2321..3635+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1302.2396.1 ID=mRNA_L-elsbetiae_contig1302.2396.1|Name=mRNA_L-elsbetiae_contig1302.2396.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1315bp|location=Sequence derived from alignment at L-elsbetiae_contig1302:2321..3635+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1302:2321..3635+ >mRNA_L-elsbetiae_contig1302.2396.1 ID=mRNA_L-elsbetiae_contig1302.2396.1|Name=mRNA_L-elsbetiae_contig1302.2396.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=468bp|location=Sequence derived from alignment at L-elsbetiae_contig1302:2321..3635+ (Laminarionema elsbetiae ELsaHSoW15)back to top |