mRNA_L-elsbetiae_contig13014.2393.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13014.2393.1
Unique NamemRNA_L-elsbetiae_contig13014.2393.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: A0A6H5JSK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK9_9PHAE)

HSP 1 Score: 472 bits (1214), Expect = 6.930e-154
Identity = 235/295 (79.66%), Postives = 257/295 (87.12%), Query Frame = 1
Query:    1 GDKEDPPPD-SPSGTAKKTAARNNLPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGGGGSAHLTGSEAIPLLNEAWQEIAPAPLDVYMDGAAAWLGVLLRCPAYGPDEVS 882
            G+K DPP D SP G A    AR+ LP GWTCDDV A ARETCRNWFYKTACIRELLPRILIEAALLPCYRFLA EDEFGQILGRLSTLVRGVG+PMVA YCRCFVAAAGA +APRE+AHAVASLQDYLFSLQEVQQGKL+ YLR N+ G +EYLHL APA+DWLLGVV PGAPR VFT+IL +YRNHCG LEVL LIL HFSP+HYAPFALEMA+LIKQG  +S+ CT  EVMGLLG KL G GSAH +G EA+PLLNEAWQEIAPAPL+VY++GAAAWLGVLL+ PAYGPDEV+
Sbjct:   82 GNKVDPPADPSPGGGAGAGGARHALPRGWTCDDVSAEARETCRNWFYKTACIRELLPRILIEAALLPCYRFLANEDEFGQILGRLSTLVRGVGNPMVAVYCRCFVAAAGAAVAPRESAHAVASLQDYLFSLQEVQQGKLEGYLRANQFGLSEYLHLHAPAIDWLLGVVGPGAPRGVFTSILANYRNHCGILEVLRLILNHFSPEHYAPFALEMALLIKQGQELSTRCTVPEVMGLLGLKLSGAGSAHPSGPEAVPLLNEAWQEIAPAPLEVYVEGAAAWLGVLLQSPAYGPDEVA 376          
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: D8LLV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV5_ECTSI)

HSP 1 Score: 460 bits (1183), Expect = 9.330e-148
Identity = 224/276 (81.16%), Postives = 244/276 (88.41%), Query Frame = 1
Query:   55 AARNNLPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGGGGSAHLTGSEAIPLLNEAWQEIAPAPLDVYMDGAAAWLGVLLRCPAYGPDEVS 882
            AAR+ LP GWTCDDV A ARETCRNWFYKTACIRELLPRILIEAALLPCYRFLA EDEFGQILGRLSTLVRGVG PMVA YCRCFVAAAGA++APRE+AHAVASLQDYLFSLQEVQQGKL+ +LR N+ G +EYLHL APA+DWLLGVV PGAPR VFT+IL HYRNHCG LEVL LIL HFSP+HYAPFALEMA+LIKQG  + + CT  EVMGLLG KL   GSAH +G EA+PLLNEAWQEIAPAPL VY++GAAAWLGVLL+ PAYGPDEV+
Sbjct:  502 AARHALPRGWTCDDVSAEARETCRNWFYKTACIRELLPRILIEAALLPCYRFLANEDEFGQILGRLSTLVRGVGSPMVAVYCRCFVAAAGAEVAPRESAHAVASLQDYLFSLQEVQQGKLEGHLRANQFGLSEYLHLHAPAIDWLLGVVGPGAPRGVFTSILAHYRNHCGILEVLRLILNHFSPEHYAPFALEMALLIKQGQELPTRCTVPEVMGLLGLKLSSAGSAHPSGPEAVPLLNEAWQEIAPAPLQVYVEGAAAWLGVLLQSPAYGPDEVA 777          
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: A0A812WDH1_SYMMI (Vps35l protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WDH1_SYMMI)

HSP 1 Score: 182 bits (463), Expect = 6.010e-50
Identity = 106/273 (38.83%), Postives = 155/273 (56.78%), Query Frame = 1
Query:   46 KKTAARNNLPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGL---LGRKLGGGGSAHLTGSEAIPLLNEAWQEIAPAP-LDVYMDGAAAWLGVLLR 852
            K T  +  LP  +T  DV  +A+ETCRNWFYKTACIRELLPRI +E ALL C+RFLA + E  QIL RL +++RGVGDP+V+ Y R ++   G ++AP  + H +  + D L S   +      + LR   + +A+YLH  +P V+WL+      + +E F  +L  YR  C    VL  I+  F   +YA  A+ MA LIK     S+H + A V+ L   LGR+L           + + LLN+ W+ ++ +  +  Y+  ++AWL V+ R
Sbjct:  223 KPTHKKIRLPENFTAADVPIIAKETCRNWFYKTACIRELLPRIYVETALLKCFRFLA-DGENAQILARLGSIIRGVGDPLVSLYARAYLVVVGNEVAPHASQHTLGMVHDVLTSFDMIDSPHQVSELRRCNITRAQYLHTMSPGVEWLMKSAGKSSNKETFQGLLQLYREKCNDSMVLKHIIDAFDASYYAHAAIGMATLIK-----SAHVSCAPVVDLYASLGRQLQLNPPPE---DQRLQLLNDVWKVVSKSDDIGAYIKCSSAWLEVIHR 486          
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: A0A7S1UKF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKF3_9STRA)

HSP 1 Score: 181 bits (458), Expect = 7.420e-48
Identity = 103/267 (38.58%), Postives = 155/267 (58.05%), Query Frame = 1
Query:   61 RNNLPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQE-VQQGKLDAYLRT-NRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGGGGSAHLTGSEAIPLLNEAWQEIAPAP-LDVYMDGAAAWLGVLLR 852
            +  L   +T  DV   A+ETCRNWFYK ACIR+++PR+ +E ALL CYRFL+ ++E+ QI GRL++++RGVGDP++AAY RC++     ++AP+   +A  +L DY+F+     + G L   L+    +    YLHL APAV+WL   V  GA +    A+L HYR  C +  VL  IL  F    YA  A  + +LIK+        +  ++M +LGR+L           + + +LNE W+ ++       Y++ A+AWL VL+R
Sbjct:  165 KRGLAADFTSADVAVDAKETCRNWFYKVACIRDIVPRVYVEMALLKCYRFLS-DNEYPQICGRLASIIRGVGDPLIAAYARCYLTRIAGEVAPQVRDYAQRALFDYMFAFDSFTRYGGLRRTLKEYGAMDLKAYLHLHAPAVEWLCDCVGAGADQATLAAVLQHYRQRCSNATVLKHILYAFDSALYAGKAGAVVILIKEA--TEGSVSQVQLMTVLGRRLA---ETPPPPEQRLQVLNEVWRVVSACDDFAQYVEAASAWLEVLVR 425          
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: F0Y850_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y850_AURAN)

HSP 1 Score: 179 bits (453), Expect = 1.420e-47
Identity = 107/265 (40.38%), Postives = 141/265 (53.21%), Query Frame = 1
Query:   88 CDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGGGGSAHLTGSEAIPLLNEAWQEIAPAP-LDVYMDGAAAWLGVLLRCPAYGPDEV 879
            C D     R  CRNWFYKTACIRELLPR  +E ALL CY FL+ + EF  ILGRL ++ RGVGDP+V  Y RC++A  GA +AP    +AV  L DYLF  +EV++    + L    L   +Y+ L  PAV+W+L  +  GA  E F  ++ HYR++C    VL  I+  F     A   L +  L KQ     S  T   ++G LGR+            + + +LNE W+       L  Y+  A AWL  LL+   YG  EV
Sbjct:  114 CADAKETRRTACRNWFYKTACIRELLPRFYVEVALLKCYEFLS-DGEFPAILGRLGSIARGVGDPLVGVYARCYLAKVGADVAPACKPYAVTMLHDYLFCFKEVRREPFASRLAALGLSDGQYIRLGEPAVEWVLRCIGRGASYEHFETVVAHYRDYCNDATVLAHIVDAFDAASVAKHPLGVVGLAKQAE--PSRVTTVALLGRLGRRFA---ECPPPPHQRLAVLNEVWKVATRCTELGDYVACATAWLDCLLK--HYGDREV 370          
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: A0A8K1CUG7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUG7_PYTOL)

HSP 1 Score: 180 bits (457), Expect = 1.540e-47
Identity = 107/266 (40.23%), Postives = 155/266 (58.27%), Query Frame = 1
Query:   70 LPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIA-PRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVS-SHCTAAEVMGLL---GRKLGGGGSAHLTGSEAIPLLNEAWQEI-APAPLDVYMDGAAAWLGVLL 849
            L   +T D+V   A+ETCRNWFYK ACIRELLPRI IE ALL CYRFL  + EF QI+ RL+++++GVG+PMVA Y R ++A A  ++  P E A  + SL DY F+ Q+ Q  KLD YL + +L    YL L +PA++WL+   A  +   VF A+L HYR    +  VL  + + F P++YA   + M  L++       S C    ++ +     R + GG        E +  LNEAW  I +   ++ YM+ AAA++ +++
Sbjct:  348 LGESFTSDEVNIQAKETCRNWFYKIACIRELLPRIYIEIALLKCYRFLC-DGEFPQIVARLASMIKGVGEPMVALYTRLYLALASTELVNPGEKAAVLTSLYDYFFAFQQYQLNKLDQYLTSQQLTHEAYLALHSPAIEWLMKCAAHSSTEIVFEALLSHYREFSDNSMVLKHLCESFGPEYYALNPIPMLQLMRLASPSQYSKCHLYSILAIQLSSARAIAGGSK-----EEKLQFLNEAWASITSQEKIEQYMECAAAYMKLIV 607          
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: K3WSD6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSD6_GLOUD)

HSP 1 Score: 179 bits (455), Expect = 2.640e-47
Identity = 108/262 (41.22%), Postives = 151/262 (57.63%), Query Frame = 1
Query:   70 LPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAV-ASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGGGGSAHLTGSEAIPLLNEAWQEI-APAPLDVYMDGAAAWLGVLL 849
            L   +   DV   A+ETCRNWFYKTACIRELLPRI IE ALL CYRFL  + E+ QI+ RLS +++GVG+PMVA Y R ++A +G+++ P     AV +SL DY FS  + Q  KL+ +L TN + + EYL L +PAV+WL+   A     EVF  IL HYR +  +  VL  I + F    YA   L M  L++      S  T   +  LL  +L    +   +    +  LN+AW  I +   +  YM+ AAA++ +++
Sbjct:  287 LSENFVSSDVNIHAKETCRNWFYKTACIRELLPRIYIEIALLKCYRFLC-DGEYPQIVARLSNMIKGVGEPMVALYTRVYLALSGSELLPPSDKTAVLSSLFDYFFSYNQFQATKLEKWLETNNMTQEEYLGLHSPAVEWLMKCAASDCHHEVFDTILAHYREYSDNSMVLKHICEAFGAQFYASRPLVMLHLMRLS--TPSQYTKCHLYSLLALQLSASPTLTTSKEGKLQFLNDAWTSITSQEDIAQYMECAAAYMKLIV 545          
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: L8GRF8_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRF8_ACACA)

HSP 1 Score: 167 bits (422), Expect = 6.690e-43
Identity = 103/268 (38.43%), Postives = 153/268 (57.09%), Query Frame = 1
Query:   70 LPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQEV-QQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSS-----HCTAAEVMGLLGRKLGGGGSAHLTGSEAIPLLNEAWQEIAP-APLDVYMDGAAAWLGVLLR 852
            LP+ ++  DV  VARETCRNWF+K A IRELLPRI +E A++ CY FL+ ++ + +++ RL  ++RGVGDP++A Y R ++A  G +IAP+ T H   S  DYL++ Q V Q+      L +++L  ++Y+HL +PA+DWLL  +A  AP +VF   L  YR    SL VL  I+  F PD+ A  A  +A LIK+  G+S      + T    + L         +     SE + LLN+ W+ +A       Y+  A  W+   L+
Sbjct:  278 LPDNFSPKDVPEVARETCRNWFFKIASIRELLPRIYVEMAIIKCYAFLS-QNSYREVINRLCMMIRGVGDPLIAMYLRAYLARKGREIAPQLTEHLTTSFNDYLYTHQIVTQRPAFQKMLDSHKLALSDYIHLYSPALDWLLQCIAHKAPVDVFQTTLAKYRKSGNSL-VLNHIISSFPPDYIAANARPIAALIKESDGLSYAKHKLYHTFGVCLAL---------APAPPESERLALLNDVWKVVAKFEDAKEYIAVAEVWIEYPLK 534          
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: A0A6S7GAP6_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GAP6_PARCT)

HSP 1 Score: 159 bits (402), Expect = 3.170e-41
Identity = 79/193 (40.93%), Postives = 115/193 (59.59%), Query Frame = 1
Query:   70 LPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLI 648
            LP+ ++ +DV  VA+ETCRNWFYK A IREL+PR  +E ++L CYRFL T  E+   L RL+ ++RG+GDP+VA Y RC++   G  +AP   +H   SL D+ F+ +++Q   +   L        +YL L  PA+DW++  +A  +P EV T IL H    C S  +L  I+  F P + +  ALE   +I
Sbjct:  265 LPDNFSPEDVTDVAKETCRNWFYKIASIRELIPRFYVETSILKCYRFLTT-GEYDNALVRLTKMIRGIGDPLVATYARCYICRVGILVAPDAKSHLRGSLLDFFFTYKQLQTDTVQNILAKQNTAPTDYLRLYTPALDWIIQCIAFKSPEEVLTEILNHCTKECNSALILNSIMSAFRPSYISARALEFVKII 456          
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: H3GGU9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGU9_PHYRM)

HSP 1 Score: 160 bits (406), Expect = 9.840e-41
Identity = 100/259 (38.61%), Postives = 146/259 (56.37%), Query Frame = 1
Query:   94 DVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAA-----GAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGG-GGSAHLTGSEAIPLLNEAWQEI-APAPLDVYMDGAAAWLGVLL 849
            DV   A ETCRNWFYKTACIRELLPRI IE ALL CYRFL  + E+ QI+ RLS +++GVG+PMVA Y R ++A       G      +T    +SL DY ++    ++ KL+ +L T+ +   EYL L +PAV+WL+   APGA ++ F A+++HY+ +  S  VL  + + F    YA    EM  LI+      S  +   +  L+  +L      A       +  LN++W  I +   +  YM+ AAA+L +++
Sbjct:  328 DVNIQASETCRNWFYKTACIRELLPRIYIEVALLGCYRFLC-DGEYPQIVARLSNMIKGVGEPMVALYARLYLALTSSEPLGTSSPAEQTLVVSSSLFDYFYAFNWFRRNKLEHWLLTHNMEYGEYLALHSPAVEWLVKCAAPGATQDTFDALVVHYQEYSDSSMVLKHLCECFGARFYASTPTEMLELIRTAS--PSLVSKCHLYSLVAVQLSSVPAMAENEPGGKLQFLNDSWSSITSQEDITQYMECAAAYLKLIV 583          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSK9_9PHAE6.930e-15479.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLV5_ECTSI9.330e-14881.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A812WDH1_SYMMI6.010e-5038.83Vps35l protein (Fragment) n=1 Tax=Symbiodinium mic... [more]
A0A7S1UKF3_9STRA7.420e-4838.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0Y850_AURAN1.420e-4740.38Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A8K1CUG7_PYTOL1.540e-4740.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WSD6_GLOUD2.640e-4741.22Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
L8GRF8_ACACA6.690e-4338.43Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A6S7GAP6_PARCT3.170e-4140.93Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
H3GGU9_PHYRM9.840e-4138.61Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13014contigL-elsbetiae_contig13014:58..4774 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score466.5
Seed ortholog evalue9.4e-129
Seed eggNOG ortholog2880.D8LLV5
Preferred nameC16orf62
Hectar predicted targeting categoryother localisation
GOsGO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006810,GO:0006887,GO:0006892,GO:0006893,GO:0006955,GO:0008150,GO:0009987,GO:0012505,GO:0012506,GO:0016020,GO:0016192,GO:0030141,GO:0030659,GO:0030667,GO:0031090,GO:0031410,GO:0031982,GO:0032940,GO:0036230,GO:0042119,GO:0043226,GO:0043227,GO:0043229,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0048193,GO:0050896,GO:0051179,GO:0051234,GO:0070820,GO:0071944,GO:0097708,GO:0098588,GO:0098805,GO:0098876,GO:0099503,GO:0101002,GO:0101003
EggNOG free text desc.protein transport
EggNOG OGsKOG3682@1,KOG3682@2759
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size882
Cds size882
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13014.2393.1prot_L-elsbetiae_contig13014.2393.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13014 58..4774 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815484.802855-CDS-L-elsbetiae_contig13014:57..2401622815484.802855-CDS-L-elsbetiae_contig13014:57..240Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13014 58..240 +
1691682920.7737398-CDS-L-elsbetiae_contig13014:57..2401691682920.7737398-CDS-L-elsbetiae_contig13014:57..240Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13014 58..240 +
1622815484.8175797-CDS-L-elsbetiae_contig13014:934..9951622815484.8175797-CDS-L-elsbetiae_contig13014:934..995Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13014 935..995 +
1691682920.7878199-CDS-L-elsbetiae_contig13014:934..9951691682920.7878199-CDS-L-elsbetiae_contig13014:934..995Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13014 935..995 +
1622815484.8332663-CDS-L-elsbetiae_contig13014:1833..21081622815484.8332663-CDS-L-elsbetiae_contig13014:1833..2108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13014 1834..2108 +
1691682920.797983-CDS-L-elsbetiae_contig13014:1833..21081691682920.797983-CDS-L-elsbetiae_contig13014:1833..2108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13014 1834..2108 +
1622815484.8482676-CDS-L-elsbetiae_contig13014:3287..34221622815484.8482676-CDS-L-elsbetiae_contig13014:3287..3422Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13014 3288..3422 +
1691682920.806654-CDS-L-elsbetiae_contig13014:3287..34221691682920.806654-CDS-L-elsbetiae_contig13014:3287..3422Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13014 3288..3422 +
1622815484.8615327-CDS-L-elsbetiae_contig13014:4038..41671622815484.8615327-CDS-L-elsbetiae_contig13014:4038..4167Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13014 4039..4167 +
1691682920.8163192-CDS-L-elsbetiae_contig13014:4038..41671691682920.8163192-CDS-L-elsbetiae_contig13014:4038..4167Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13014 4039..4167 +
1622815484.872834-CDS-L-elsbetiae_contig13014:4675..47741622815484.872834-CDS-L-elsbetiae_contig13014:4675..4774Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13014 4676..4774 +
1691682920.8252718-CDS-L-elsbetiae_contig13014:4675..47741691682920.8252718-CDS-L-elsbetiae_contig13014:4675..4774Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13014 4676..4774 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13014.2393.1

>prot_L-elsbetiae_contig13014.2393.1 ID=prot_L-elsbetiae_contig13014.2393.1|Name=mRNA_L-elsbetiae_contig13014.2393.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=294bp
GDKEDPPPDSPSGTAKKTAARNNLPNGWTCDDVGAVARETCRNWFYKTAC
IRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYC
RCFVAAAGAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKA
EYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHF
SPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGGGGSAHLTGS
EAIPLLNEAWQEIAPAPLDVYMDGAAAWLGVLLRCPAYGPDEVS
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mRNA from alignment at L-elsbetiae_contig13014:58..4774+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13014.2393.1 ID=mRNA_L-elsbetiae_contig13014.2393.1|Name=mRNA_L-elsbetiae_contig13014.2393.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4717bp|location=Sequence derived from alignment at L-elsbetiae_contig13014:58..4774+ (Laminarionema elsbetiae ELsaHSoW15)
GGCGACAAGGAGGATCCTCCGCCCGATTCTCCATCGGGGACGGCGAAGAA GACGGCGGCGCGCAACAACTTGCCGAACGGCTGGACCTGCGACGACGTAG GCGCGGTGGCCAGGGAGACCTGCCGAAACTGGTTCTACAAGACGGCGTGC ATCCGGGAGCTCCTCCCCAGGATACTGATCGAGGTCGGTGGTGTCCTCGG GGGGGGGGGGGGGGGGGGGGGGGGCGGCGGGTGGTGGGGGGGGGGGGGGG GTGTGGGGTTTGTGGGGGGGGGGGGGGGGGGGGGGGGGGTTCTCGCGCTG TCTGTCGTGTGCGGATGTCGTATGTGTGTTATGTAGCGTGCGAGCAGCGG GGGCAGACGCGTCGACGAGAGTGGATGCGGCCTTTCCCCGCTTTTCGTCT GCTTTTGTTTTCGTCTGTGCTGGTGGCTCGTGAGGATAGATACACAGAGG ATAGATATGTAGATGCTTTAACGCCGGCGGGCACCACGCTGACTTTCTGA CGGGGGCATGCGTTTATATGTGAAGGGGATTTTTTTTTTTTTTTTTTTGT CCGCCTTTGCGAAGATATCAACTTTTTTTTCCCCGTAGAAAGAGAATATA GACGGGGGGCTCTGTACGCTAACCCTGACCCTATGTAACCCCGAACCCCC GACCCCCTTTCCCAATTCCTATACTTTTATCCCCCCGTGTTCGCTTAAGA GAAACCCTGCGAAGGCTACTACTACTATCTGTGTTGTTTGTATCTCTCTC TCTCTTACGACCGTGACGTCAGCTGGGTTGTTCAGCTCTTGCGCTTTTTC TGAAGGCGTAATCGATCGCGCCACTTCCGTGAACTAATAACCCCCCCCCC CCTCCCCGCTCTCCTTTCCCGGTGCAGGCGGCGCTCCTTCCCTGCTACCG CTTCCTGGCCACCGAGGACGAATTCGGGCAAATCCTAGGTACTTCCGAAT AATACCGTAGGTGAATGGAATATACCCCCCCCCTGGACAGATTTTTAAAG CTCGATTGCTCCCCAGCAAGAAGAGTTCCAGTGGCCGAAAGGGGGTGGGG TTGGAAATACCTAGTCGAGGGCTGTCCAAAAATGGTTAGTTTGGTGCTGG TACCCTCTTCGTTGCGGAGTAATGGAGCTCTGAAAGTCCGTCTGGGGGGG GGGGTGGTATATTTTGTCACCTACGGTTGTAGTGTAGCACGACCCCGAAA TCTGCCCATCAGGTCGGTCGATGTTTATGCGTCCGTTCCCACACCAGATA CTCTCACCCCCCCGCCCCCCGCGCCCTTTGTACAGCAGAGGTGATGGCTC TCTGGTTGTGTGTTTGTGCCGTCTTCCCCCCCCCGCGCTCGCGCGCGCCC GCAAAGCCGACTTTTGCTCCACGAAGCACGATGCGAATGGCAGTGAGAGC TGCTCCGGTAGATCAAAGACGATCGGGCTGGAAAGGAGCGGAATAAAGAG TACATAGAGTATCGTACCAGCAAGTACTTTTGCCGGAACCCGCGTGAAGA TCCCACATTTGCTGAGAGTACAAGCAAGGTCTCTTGTGTATAGATACAGC TTTAAATTTAAAACAGTGGCGCAATTGTTGGCAGGAGCACTGCTGCAGGT CTCTAGCTTAAGTGGGGTTGAATGATTCGGAACAGCGCTCCATCGAAAAT CGCATCGAGCCGAGATGATCCCGTTGGTTTGCGGCACAACGATCGCGGCA AGGCGGCCGAATGAGCATGCCCCGTCTAATTAATCACATGACCACCGCGC GCGCGCGCCTCTCCTGCTGTATCTAGGCCGGCTGTCGACCCTCGTGCGAG GTGTTGGAGACCCGATGGTGGCGGCGTACTGCCGCTGCTTCGTCGCGGCC GCCGGGGCCAAGATCGCGCCGCGAGAGACCGCCCACGCGGTGGCGTCGCT GCAGGACTACCTCTTCAGCCTGCAGGAGGTGCAGCAGGGCAAGCTGGACG CCTACCTCCGGACGAACCGCCTCGGCAAGGCGGAGTACCTGCACCTGCAG GCGCCGGCGGTGGACTGGCTCCTCGGTGTCGTCGCCCCGGGGGCTCCGCG GGTGAGAGAGCGTCGGTGGTTGCCTTTTGGTGTGTGTGTGTGTGTGTGTG TGTGTGTCCGCACGCTCCCACCAAACACGTCGAGGATCCCTACATACCGT AATCATGCGAGTGGTCGCACCCCCCCGGACCGATTTCCAAAGCTCGATTG CTCCTTCACGAAGAGGGTGCCAACACCAAACGGCACGTTTTTATGACAGA TCTCGACGTGATCGTGCCATGCCACCCTTTTCGATGCCGGCACCCCCCTT CGTCAAGGCGCAATTGAGCCTTGAAAATAGGTACGGGGGGAGGGCGATGA CTCGCATGATTACGGTATCCCTTCGTGGCGCCACAACGGCGCCTACGCTT GACCTGTATGTAGTAGTCCAGTCAGTGGTCATGATGCTTTTCAACAAAAG CTAGTTCCGGAGCCCGTCGAAGTAGCTGTCGTCGTTGACTACGCTCTGTC GCTGATTGCGCTCAAGCAAGCAACCACGCTCTACCTTACTACTGACAAGC AGGTCAGTATAAGGTTGTCCTGAGGGGCGCAGTGGCGCAGTAGTACATAG GTCGTGTTTTCCTGTTGTAATGTATTGAGAGAACAGCTCGGAGCGCAACA CATTGCTTGGGAGACACTGCCAACGAGTTCTCGAAACGATTCCCACCCTT CTTCTTTCCTCCGGGTAAATGTCGCAGAAAGGGTCTCTCTCTCTGCTCGA TATACTGAAAAAACATTCCCCATGAAAAGCCAGCTGTGGGGGGTCTGCAG ATCCCGCGTCGCCCCCCCCCCCCGCGCCTACCCCCGGCTGTTGTTCATGG AAGCAACCCGCCCCCGCCCCCGGCTCAAAATGTATAGATTCGCAGAGAGA CGTGTTTTTACCTCTGCACATGGTACTCAACGCCACCGTCTGGAGACCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCTC CTCTCCNNNNNNNNNATTCGCAGAGAGACGTGTTTTTACCCCTGCACATG GTACCCAACGCCCCCGCCTGGGGCCCCCCCCCCCCGACCCCCCCCGACCC CCGGCTGCCAACGCCCCCCCCCGCCCCGCCGACGATACCCCTCCTTTCTA TTGTTTGTTGCTTTTGTTGACGCTGGTCAGGAGGTGTTCACGGCCATCTT GATGCACTACCGCAACCACTGCGGTAGCCTGGAGGTGCTCTGCCTGATCC TCAAGCACTTCAGCCCGGACCACTACGCGCCCTTTGCGCTAGAGATGGCC GTTCTTATCAAACAGGTGGGGGGGCGGCACGAATCGCCGGGTGTCAGCAC ATGGCATGGGTGGGTGTGGTTTTACTTACTGCCTTTTTAAACCTTGGACA ACCAGCGCTGACTGGTAGAAGGGTTTGATTTCGGCTTCCGGAATGGTTTT GATATCTACTCTGCATATGGTCAAGCTTCAAACTTTCGAATACACTTTGG AGATCCTTACGAGCGGCAGCGAGCCACCAGCGTCGTCTGGTTCAACTTTC CTCTTCTTCGCTGATTAAACATTCCGCTTTGGGAGGGTGTTGCAGATGTG TATGCCACGAAGGGCGTCTACGGTAAATATCCAGAACGAGCCTAGAGTGG AGAATCCTGCATCACTTGTACTTCTATATTATAGGGAGTAAACCCTTGCT GCTGCTGCTGCTGCTGCTGCTGCTGCTGTGCTGCGTCTGCGGCTAAATAG CGGCTGCTGGACAGCGACTGCTGGAGAGCGGCTACTGCAGCGGCATCTGC TCAAAACTGCCTGTTCATGTCAATGTAGACGTGGATCGTGCATGATGGTG CTTCCCCCACCCCCCCCCCTCGAAAGCCACGCTAAAATGTTGCGGCCGCG GGTTAAAACGCGTCAAACCAAAAACCAACAGGGACACGGCGTTTCCAGCC ACTGCACGGCGGCGGAGGTGATGGGACTGCTCGGCCGGAAGCTGGGGGGT GGAGGAAGCGCACACCTCACGGGTAGCGAAGCCATCCCGCTTCTGAACGA GGCCTGGCAGGTAGGGGACCCGTGCGCGGTAGGAGGTGGGTGGACGGGGG GGGGGGGGGGGGAAGGGATAGGGGGGGGGGGGACCCCCCCCCGCCATTTG TGGGGGTTGTTTGGGGGGGTGGNNNNNNNNNNTGTGGGGCGGCCGGGGGG GGCGCGGGGAGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGTGAAGGGATAGGGCGAGTGAGGACCC CCCCCCGCCATTCGTGGTGTTCGTTGGCGGTGATGGATAACCTGCAGCGA GAAGAGTGGCGGCGAGAGCTGCAGGGTGGCAGTTATCTAAATAAAGTGCA AGAACTGCCTCCGGCGCGCTGAAAGCCTGTTGATTTTGCTCGACTACCGT GCCCTTCCCCCCTGCCCTTCCGCCTGCCGTTCCCTGCCGTTCCCTGCCGT TCCCTGCCGCCCGGCGTTCCTACAACAAATACTGGCTGTTGGGGCTGTTT TTTTCTTTGTCACGCCAGGAGATAGCCCCGGCCCCGTTAGACGTGTACAT GGACGGGGCGGCGGCATGGCTTGGAGTGCTCCTTCGATGCCCGGCTTACG GGCCGGACGAGGTGAGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13014:58..4774+

>mRNA_L-elsbetiae_contig13014.2393.1 ID=mRNA_L-elsbetiae_contig13014.2393.1|Name=mRNA_L-elsbetiae_contig13014.2393.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1764bp|location=Sequence derived from alignment at L-elsbetiae_contig13014:58..4774+ (Laminarionema elsbetiae ELsaHSoW15)
GGCGACAAGGAGGATCCTCCGCCCGATTCTCCATCGGGGACGGCGAAGAA
GACGGCGGCGCGCAACAACTTGCCGAACGGCTGGACCTGCGACGACGTAG
GCGCGGTGGCCAGGGAGACCTGCCGAAACTGGTTCTACAAGACGGCGTGC
ATCCGGGAGCTCCTCCCCAGGATACTGATCGAGGGCGACAAGGAGGATCC
TCCGCCCGATTCTCCATCGGGGACGGCGAAGAAGACGGCGGCGCGCAACA
ACTTGCCGAACGGCTGGACCTGCGACGACGTAGGCGCGGTGGCCAGGGAG
ACCTGCCGAAACTGGTTCTACAAGACGGCGTGCATCCGGGAGCTCCTCCC
CAGGATACTGATCGAGGCGGCGCTCCTTCCCTGCTACCGCTTCCTGGCCA
CCGAGGACGAATTCGGGCAAATCCTAGGCGGCGCTCCTTCCCTGCTACCG
CTTCCTGGCCACCGAGGACGAATTCGGGCAAATCCTAGGCCGGCTGTCGA
CCCTCGTGCGAGGTGTTGGAGACCCGATGGTGGCGGCGTACTGCCGCTGC
TTCGTCGCGGCCGCCGGGGCCAAGATCGCGCCGCGAGAGACCGCCCACGC
GGTGGCGTCGCTGCAGGACTACCTCTTCAGCCTGCAGGAGGTGCAGCAGG
GCAAGCTGGACGCCTACCTCCGGACGAACCGCCTCGGCAAGGCGGAGTAC
CTGCACCTGCAGGCGCCGGCGGTGGACTGGCTCCTCGGTGTCGTCGCCCC
GGGGGCTCCGCGGGCCGGCTGTCGACCCTCGTGCGAGGTGTTGGAGACCC
GATGGTGGCGGCGTACTGCCGCTGCTTCGTCGCGGCCGCCGGGGCCAAGA
TCGCGCCGCGAGAGACCGCCCACGCGGTGGCGTCGCTGCAGGACTACCTC
TTCAGCCTGCAGGAGGTGCAGCAGGGCAAGCTGGACGCCTACCTCCGGAC
GAACCGCCTCGGCAAGGCGGAGTACCTGCACCTGCAGGCGCCGGCGGTGG
ACTGGCTCCTCGGTGTCGTCGCCCCGGGGGCTCCGCGGGAGGTGTTCACG
GCCATCTTGATGCACTACCGCAACCACTGCGGTAGCCTGGAGGTGCTCTG
CCTGATCCTCAAGCACTTCAGCCCGGACCACTACGCGCCCTTTGCGCTAG
AGATGGCCGTTCTTATCAAACAGGAGGTGTTCACGGCCATCTTGATGCAC
TACCGCAACCACTGCGGTAGCCTGGAGGTGCTCTGCCTGATCCTCAAGCA
CTTCAGCCCGGACCACTACGCGCCCTTTGCGCTAGAGATGGCCGTTCTTA
TCAAACAGGGACACGGCGTTTCCAGCCACTGCACGGCGGCGGAGGTGATG
GGACTGCTCGGCCGGAAGCTGGGGGGTGGAGGAAGCGCACACCTCACGGG
TAGCGAAGCCATCCCGCTTCTGAACGAGGCCTGGCAGGGACACGGCGTTT
CCAGCCACTGCACGGCGGCGGAGGTGATGGGACTGCTCGGCCGGAAGCTG
GGGGGTGGAGGAAGCGCACACCTCACGGGTAGCGAAGCCATCCCGCTTCT
GAACGAGGCCTGGCAGGAGATAGCCCCGGCCCCGTTAGACGTGTACATGG
ACGGGGCGGCGGCATGGCTTGGAGTGCTCCTTCGATGCCCGGCTTACGGG
CCGGACGAGGTGAGTGAGATAGCCCCGGCCCCGTTAGACGTGTACATGGA
CGGGGCGGCGGCATGGCTTGGAGTGCTCCTTCGATGCCCGGCTTACGGGC
CGGACGAGGTGAGT
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