mRNA_L-elsbetiae_contig13014.2393.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: A0A6H5JSK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK9_9PHAE) HSP 1 Score: 472 bits (1214), Expect = 6.930e-154 Identity = 235/295 (79.66%), Postives = 257/295 (87.12%), Query Frame = 1 Query: 1 GDKEDPPPD-SPSGTAKKTAARNNLPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGGGGSAHLTGSEAIPLLNEAWQEIAPAPLDVYMDGAAAWLGVLLRCPAYGPDEVS 882 G+K DPP D SP G A AR+ LP GWTCDDV A ARETCRNWFYKTACIRELLPRILIEAALLPCYRFLA EDEFGQILGRLSTLVRGVG+PMVA YCRCFVAAAGA +APRE+AHAVASLQDYLFSLQEVQQGKL+ YLR N+ G +EYLHL APA+DWLLGVV PGAPR VFT+IL +YRNHCG LEVL LIL HFSP+HYAPFALEMA+LIKQG +S+ CT EVMGLLG KL G GSAH +G EA+PLLNEAWQEIAPAPL+VY++GAAAWLGVLL+ PAYGPDEV+ Sbjct: 82 GNKVDPPADPSPGGGAGAGGARHALPRGWTCDDVSAEARETCRNWFYKTACIRELLPRILIEAALLPCYRFLANEDEFGQILGRLSTLVRGVGNPMVAVYCRCFVAAAGAAVAPRESAHAVASLQDYLFSLQEVQQGKLEGYLRANQFGLSEYLHLHAPAIDWLLGVVGPGAPRGVFTSILANYRNHCGILEVLRLILNHFSPEHYAPFALEMALLIKQGQELSTRCTVPEVMGLLGLKLSGAGSAHPSGPEAVPLLNEAWQEIAPAPLEVYVEGAAAWLGVLLQSPAYGPDEVA 376
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: D8LLV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV5_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 9.330e-148 Identity = 224/276 (81.16%), Postives = 244/276 (88.41%), Query Frame = 1 Query: 55 AARNNLPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGGGGSAHLTGSEAIPLLNEAWQEIAPAPLDVYMDGAAAWLGVLLRCPAYGPDEVS 882 AAR+ LP GWTCDDV A ARETCRNWFYKTACIRELLPRILIEAALLPCYRFLA EDEFGQILGRLSTLVRGVG PMVA YCRCFVAAAGA++APRE+AHAVASLQDYLFSLQEVQQGKL+ +LR N+ G +EYLHL APA+DWLLGVV PGAPR VFT+IL HYRNHCG LEVL LIL HFSP+HYAPFALEMA+LIKQG + + CT EVMGLLG KL GSAH +G EA+PLLNEAWQEIAPAPL VY++GAAAWLGVLL+ PAYGPDEV+ Sbjct: 502 AARHALPRGWTCDDVSAEARETCRNWFYKTACIRELLPRILIEAALLPCYRFLANEDEFGQILGRLSTLVRGVGSPMVAVYCRCFVAAAGAEVAPRESAHAVASLQDYLFSLQEVQQGKLEGHLRANQFGLSEYLHLHAPAIDWLLGVVGPGAPRGVFTSILAHYRNHCGILEVLRLILNHFSPEHYAPFALEMALLIKQGQELPTRCTVPEVMGLLGLKLSSAGSAHPSGPEAVPLLNEAWQEIAPAPLQVYVEGAAAWLGVLLQSPAYGPDEVA 777
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: A0A812WDH1_SYMMI (Vps35l protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WDH1_SYMMI) HSP 1 Score: 182 bits (463), Expect = 6.010e-50 Identity = 106/273 (38.83%), Postives = 155/273 (56.78%), Query Frame = 1 Query: 46 KKTAARNNLPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGL---LGRKLGGGGSAHLTGSEAIPLLNEAWQEIAPAP-LDVYMDGAAAWLGVLLR 852 K T + LP +T DV +A+ETCRNWFYKTACIRELLPRI +E ALL C+RFLA + E QIL RL +++RGVGDP+V+ Y R ++ G ++AP + H + + D L S + + LR + +A+YLH +P V+WL+ + +E F +L YR C VL I+ F +YA A+ MA LIK S+H + A V+ L LGR+L + + LLN+ W+ ++ + + Y+ ++AWL V+ R Sbjct: 223 KPTHKKIRLPENFTAADVPIIAKETCRNWFYKTACIRELLPRIYVETALLKCFRFLA-DGENAQILARLGSIIRGVGDPLVSLYARAYLVVVGNEVAPHASQHTLGMVHDVLTSFDMIDSPHQVSELRRCNITRAQYLHTMSPGVEWLMKSAGKSSNKETFQGLLQLYREKCNDSMVLKHIIDAFDASYYAHAAIGMATLIK-----SAHVSCAPVVDLYASLGRQLQLNPPPE---DQRLQLLNDVWKVVSKSDDIGAYIKCSSAWLEVIHR 486
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: A0A7S1UKF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKF3_9STRA) HSP 1 Score: 181 bits (458), Expect = 7.420e-48 Identity = 103/267 (38.58%), Postives = 155/267 (58.05%), Query Frame = 1 Query: 61 RNNLPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQE-VQQGKLDAYLRT-NRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGGGGSAHLTGSEAIPLLNEAWQEIAPAP-LDVYMDGAAAWLGVLLR 852 + L +T DV A+ETCRNWFYK ACIR+++PR+ +E ALL CYRFL+ ++E+ QI GRL++++RGVGDP++AAY RC++ ++AP+ +A +L DY+F+ + G L L+ + YLHL APAV+WL V GA + A+L HYR C + VL IL F YA A + +LIK+ + ++M +LGR+L + + +LNE W+ ++ Y++ A+AWL VL+R Sbjct: 165 KRGLAADFTSADVAVDAKETCRNWFYKVACIRDIVPRVYVEMALLKCYRFLS-DNEYPQICGRLASIIRGVGDPLIAAYARCYLTRIAGEVAPQVRDYAQRALFDYMFAFDSFTRYGGLRRTLKEYGAMDLKAYLHLHAPAVEWLCDCVGAGADQATLAAVLQHYRQRCSNATVLKHILYAFDSALYAGKAGAVVILIKEA--TEGSVSQVQLMTVLGRRLA---ETPPPPEQRLQVLNEVWRVVSACDDFAQYVEAASAWLEVLVR 425
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: F0Y850_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y850_AURAN) HSP 1 Score: 179 bits (453), Expect = 1.420e-47 Identity = 107/265 (40.38%), Postives = 141/265 (53.21%), Query Frame = 1 Query: 88 CDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGGGGSAHLTGSEAIPLLNEAWQEIAPAP-LDVYMDGAAAWLGVLLRCPAYGPDEV 879 C D R CRNWFYKTACIRELLPR +E ALL CY FL+ + EF ILGRL ++ RGVGDP+V Y RC++A GA +AP +AV L DYLF +EV++ + L L +Y+ L PAV+W+L + GA E F ++ HYR++C VL I+ F A L + L KQ S T ++G LGR+ + + +LNE W+ L Y+ A AWL LL+ YG EV Sbjct: 114 CADAKETRRTACRNWFYKTACIRELLPRFYVEVALLKCYEFLS-DGEFPAILGRLGSIARGVGDPLVGVYARCYLAKVGADVAPACKPYAVTMLHDYLFCFKEVRREPFASRLAALGLSDGQYIRLGEPAVEWVLRCIGRGASYEHFETVVAHYRDYCNDATVLAHIVDAFDAASVAKHPLGVVGLAKQAE--PSRVTTVALLGRLGRRFA---ECPPPPHQRLAVLNEVWKVATRCTELGDYVACATAWLDCLLK--HYGDREV 370
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: A0A8K1CUG7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUG7_PYTOL) HSP 1 Score: 180 bits (457), Expect = 1.540e-47 Identity = 107/266 (40.23%), Postives = 155/266 (58.27%), Query Frame = 1 Query: 70 LPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIA-PRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVS-SHCTAAEVMGLL---GRKLGGGGSAHLTGSEAIPLLNEAWQEI-APAPLDVYMDGAAAWLGVLL 849 L +T D+V A+ETCRNWFYK ACIRELLPRI IE ALL CYRFL + EF QI+ RL+++++GVG+PMVA Y R ++A A ++ P E A + SL DY F+ Q+ Q KLD YL + +L YL L +PA++WL+ A + VF A+L HYR + VL + + F P++YA + M L++ S C ++ + R + GG E + LNEAW I + ++ YM+ AAA++ +++ Sbjct: 348 LGESFTSDEVNIQAKETCRNWFYKIACIRELLPRIYIEIALLKCYRFLC-DGEFPQIVARLASMIKGVGEPMVALYTRLYLALASTELVNPGEKAAVLTSLYDYFFAFQQYQLNKLDQYLTSQQLTHEAYLALHSPAIEWLMKCAAHSSTEIVFEALLSHYREFSDNSMVLKHLCESFGPEYYALNPIPMLQLMRLASPSQYSKCHLYSILAIQLSSARAIAGGSK-----EEKLQFLNEAWASITSQEKIEQYMECAAAYMKLIV 607
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: K3WSD6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSD6_GLOUD) HSP 1 Score: 179 bits (455), Expect = 2.640e-47 Identity = 108/262 (41.22%), Postives = 151/262 (57.63%), Query Frame = 1 Query: 70 LPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAV-ASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGGGGSAHLTGSEAIPLLNEAWQEI-APAPLDVYMDGAAAWLGVLL 849 L + DV A+ETCRNWFYKTACIRELLPRI IE ALL CYRFL + E+ QI+ RLS +++GVG+PMVA Y R ++A +G+++ P AV +SL DY FS + Q KL+ +L TN + + EYL L +PAV+WL+ A EVF IL HYR + + VL I + F YA L M L++ S T + LL +L + + + LN+AW I + + YM+ AAA++ +++ Sbjct: 287 LSENFVSSDVNIHAKETCRNWFYKTACIRELLPRIYIEIALLKCYRFLC-DGEYPQIVARLSNMIKGVGEPMVALYTRVYLALSGSELLPPSDKTAVLSSLFDYFFSYNQFQATKLEKWLETNNMTQEEYLGLHSPAVEWLMKCAASDCHHEVFDTILAHYREYSDNSMVLKHICEAFGAQFYASRPLVMLHLMRLS--TPSQYTKCHLYSLLALQLSASPTLTTSKEGKLQFLNDAWTSITSQEDIAQYMECAAAYMKLIV 545
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: L8GRF8_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRF8_ACACA) HSP 1 Score: 167 bits (422), Expect = 6.690e-43 Identity = 103/268 (38.43%), Postives = 153/268 (57.09%), Query Frame = 1 Query: 70 LPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQEV-QQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSS-----HCTAAEVMGLLGRKLGGGGSAHLTGSEAIPLLNEAWQEIAP-APLDVYMDGAAAWLGVLLR 852 LP+ ++ DV VARETCRNWF+K A IRELLPRI +E A++ CY FL+ ++ + +++ RL ++RGVGDP++A Y R ++A G +IAP+ T H S DYL++ Q V Q+ L +++L ++Y+HL +PA+DWLL +A AP +VF L YR SL VL I+ F PD+ A A +A LIK+ G+S + T + L + SE + LLN+ W+ +A Y+ A W+ L+ Sbjct: 278 LPDNFSPKDVPEVARETCRNWFFKIASIRELLPRIYVEMAIIKCYAFLS-QNSYREVINRLCMMIRGVGDPLIAMYLRAYLARKGREIAPQLTEHLTTSFNDYLYTHQIVTQRPAFQKMLDSHKLALSDYIHLYSPALDWLLQCIAHKAPVDVFQTTLAKYRKSGNSL-VLNHIISSFPPDYIAANARPIAALIKESDGLSYAKHKLYHTFGVCLAL---------APAPPESERLALLNDVWKVVAKFEDAKEYIAVAEVWIEYPLK 534
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: A0A6S7GAP6_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GAP6_PARCT) HSP 1 Score: 159 bits (402), Expect = 3.170e-41 Identity = 79/193 (40.93%), Postives = 115/193 (59.59%), Query Frame = 1 Query: 70 LPNGWTCDDVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAAGAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLI 648 LP+ ++ +DV VA+ETCRNWFYK A IREL+PR +E ++L CYRFL T E+ L RL+ ++RG+GDP+VA Y RC++ G +AP +H SL D+ F+ +++Q + L +YL L PA+DW++ +A +P EV T IL H C S +L I+ F P + + ALE +I Sbjct: 265 LPDNFSPEDVTDVAKETCRNWFYKIASIRELIPRFYVETSILKCYRFLTT-GEYDNALVRLTKMIRGIGDPLVATYARCYICRVGILVAPDAKSHLRGSLLDFFFTYKQLQTDTVQNILAKQNTAPTDYLRLYTPALDWIIQCIAFKSPEEVLTEILNHCTKECNSALILNSIMSAFRPSYISARALEFVKII 456
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Match: H3GGU9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGU9_PHYRM) HSP 1 Score: 160 bits (406), Expect = 9.840e-41 Identity = 100/259 (38.61%), Postives = 146/259 (56.37%), Query Frame = 1 Query: 94 DVGAVARETCRNWFYKTACIRELLPRILIEAALLPCYRFLATEDEFGQILGRLSTLVRGVGDPMVAAYCRCFVAAA-----GAKIAPRETAHAVASLQDYLFSLQEVQQGKLDAYLRTNRLGKAEYLHLQAPAVDWLLGVVAPGAPREVFTAILMHYRNHCGSLEVLCLILKHFSPDHYAPFALEMAVLIKQGHGVSSHCTAAEVMGLLGRKLGG-GGSAHLTGSEAIPLLNEAWQEI-APAPLDVYMDGAAAWLGVLL 849 DV A ETCRNWFYKTACIRELLPRI IE ALL CYRFL + E+ QI+ RLS +++GVG+PMVA Y R ++A G +T +SL DY ++ ++ KL+ +L T+ + EYL L +PAV+WL+ APGA ++ F A+++HY+ + S VL + + F YA EM LI+ S + + L+ +L A + LN++W I + + YM+ AAA+L +++ Sbjct: 328 DVNIQASETCRNWFYKTACIRELLPRIYIEVALLGCYRFLC-DGEYPQIVARLSNMIKGVGEPMVALYARLYLALTSSEPLGTSSPAEQTLVVSSSLFDYFYAFNWFRRNKLEHWLLTHNMEYGEYLALHSPAVEWLVKCAAPGATQDTFDALVVHYQEYSDSSMVLKHLCECFGARFYASTPTEMLELIRTAS--PSLVSKCHLYSLVAVQLSSVPAMAENEPGGKLQFLNDSWSSITSQEDITQYMECAAAYLKLIV 583 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13014.2393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13014.2393.1 >prot_L-elsbetiae_contig13014.2393.1 ID=prot_L-elsbetiae_contig13014.2393.1|Name=mRNA_L-elsbetiae_contig13014.2393.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=294bp GDKEDPPPDSPSGTAKKTAARNNLPNGWTCDDVGAVARETCRNWFYKTACback to top mRNA from alignment at L-elsbetiae_contig13014:58..4774+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13014.2393.1 ID=mRNA_L-elsbetiae_contig13014.2393.1|Name=mRNA_L-elsbetiae_contig13014.2393.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4717bp|location=Sequence derived from alignment at L-elsbetiae_contig13014:58..4774+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13014:58..4774+ >mRNA_L-elsbetiae_contig13014.2393.1 ID=mRNA_L-elsbetiae_contig13014.2393.1|Name=mRNA_L-elsbetiae_contig13014.2393.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1764bp|location=Sequence derived from alignment at L-elsbetiae_contig13014:58..4774+ (Laminarionema elsbetiae ELsaHSoW15)back to top |