mRNA_L-elsbetiae_contig12776.2228.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12776.2228.1 vs. uniprot
Match: D7G3X6_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X6_ECTSI) HSP 1 Score: 167 bits (423), Expect = 1.190e-50 Identity = 85/109 (77.98%), Postives = 97/109 (88.99%), Query Frame = 1 Query: 1 MYAWI-FFSRSRTFTLGLLTLVVVLLFADQNLLAPNLSAVAEEFGFDELEKDRRLGGDIAIAFFGFGAPASLLIGWLTDLVDRRNLFVAIVVVGELGALATVFVTTFSQ 324 +++W+ RS FTL LLTLVVVLLFADQNLLAPNLSA+AEEFGF+E EKDR LGGDIA+AFFGFGAPASLL+GWLTD++DRR LFVAIV +GE+G LATVFVTTFSQ Sbjct: 32 VHSWLEMLRRSSMFTLALLTLVVVLLFADQNLLAPNLSAIAEEFGFNEEEKDRHLGGDIAVAFFGFGAPASLLVGWLTDVIDRRKLFVAIVAIGEMGTLATVFVTTFSQ 140
BLAST of mRNA_L-elsbetiae_contig12776.2228.1 vs. uniprot
Match: A0A6H5KP69_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP69_9PHAE) HSP 1 Score: 165 bits (418), Expect = 2.470e-46 Identity = 84/109 (77.06%), Postives = 97/109 (88.99%), Query Frame = 1 Query: 1 MYAWI-FFSRSRTFTLGLLTLVVVLLFADQNLLAPNLSAVAEEFGFDELEKDRRLGGDIAIAFFGFGAPASLLIGWLTDLVDRRNLFVAIVVVGELGALATVFVTTFSQ 324 +++W+ RS FTL LLTLVVVLLFADQNLLAPNLSA+AEEFGF+E EKDR LGGDIA+AFFGFGAPAS+L+GWLTD++DRR LFVAIV +GE+G LATVFVTTFSQ Sbjct: 32 VHSWLEILRRSSMFTLALLTLVVVLLFADQNLLAPNLSAIAEEFGFNEEEKDRHLGGDIAVAFFGFGAPASVLVGWLTDVIDRRKLFVAIVALGEMGTLATVFVTTFSQ 140
BLAST of mRNA_L-elsbetiae_contig12776.2228.1 vs. uniprot
Match: A0A7S0X5V5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X5V5_9CHLO) HSP 1 Score: 111 bits (277), Expect = 4.380e-27 Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 1 Query: 25 RSRTFTLGLLTLVVVLLFADQNLLAPNLSAVAEEFGFDELEKDRRLGGDIAIAFFGFGAPASLLIGWLTDLVDRRNLFVAIVVVGELGALATVFVTTFSQ 324 R + +T+GLLTL + L+ADQNLL+PNLSAVA++FGFDE EKD +LGG + +AFF G+PASL+IGWL+D V R LF V++GE LAT +V T+ Q Sbjct: 127 RVKYYTVGLLTLTSMFLYADQNLLSPNLSAVADDFGFDEREKDLKLGGWLQLAFFCVGSPASLIIGWLSDKVPRMRLFFITVLLGEGPCLATYWVKTYWQ 226
BLAST of mRNA_L-elsbetiae_contig12776.2228.1 vs. uniprot
Match: A0A7S2YGU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YGU5_9STRA) HSP 1 Score: 107 bits (266), Expect = 7.300e-26 Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 1 Query: 25 RSRTFTLGLLTLVVVLLFADQNLLAPNLSAVAEEFGFDELEKDRRLGGDIAIAFFGFGAPASLLIGWLTDLVDRRNLFVAIVVVGELGALATVFVTTFSQ 324 R+ + L L +L +LLFADQNL+APNL+A+A EFGF E E+D +LGG I++AFF GAPAS IG+LTD +R LF V +GEL LAT FV T+ Q Sbjct: 139 RTNAWALTLFSLSAILLFADQNLMAPNLTAIATEFGFSEQERDEKLGGHISLAFFCLGAPASFAIGYLTDSYNRSILFFVTVGLGELACLATYFVETYRQ 238
BLAST of mRNA_L-elsbetiae_contig12776.2228.1 vs. uniprot
Match: A0A250XI72_9CHLO (MFS domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XI72_9CHLO) HSP 1 Score: 108 bits (271), Expect = 1.950e-25 Identity = 59/103 (57.28%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 19 FSRS-RTFTLGLLTLVVVLLFADQNLLAPNLSAVAEEFGFDELEKDRRLGGDIAIAFFGFGAPASLLIGWLTDLVDRRNLFVAIVVVGELGALATVFVTTFSQ 324 FSR R +T GL TL+ VLLFADQNLLAPNLSA A F E +KD LGG I+ AFF GAPA+LL+GW TD V+RRNL A+ + G+ + T+FVT + Q Sbjct: 65 FSRGQRYYTTGLFTLMAVLLFADQNLLAPNLSAAAAFFNMSETQKDIFLGGYISAAFFAVGAPAALLVGWYTDKVNRRNLLFAVAIFGQAPNMCTIFVTEYWQ 167
BLAST of mRNA_L-elsbetiae_contig12776.2228.1 vs. uniprot
Match: A0A2P6VRC8_9CHLO (MFS family transporter: sugar n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRC8_9CHLO) HSP 1 Score: 107 bits (266), Expect = 1.050e-24 Identity = 54/101 (53.47%), Postives = 72/101 (71.29%), Query Frame = 1 Query: 22 SRSRTFTLGLLTLVVVLLFADQNLLAPNLSAVAEEFGFDELEKDRRLGGDIAIAFFGFGAPASLLIGWLTDLVDRRNLFVAIVVVGELGALATVFVTTFSQ 324 R R + L +L LL+ADQNL+APNL+A+A +FGFDE ++DR LGG IA AF+ GAPA+LL GWL+D V+R+ L A VV+GE + T+FVT + Q Sbjct: 123 KRERMVMVSLFSLTAALLYADQNLMAPNLTAIATDFGFDEAQRDRMLGGVIAAAFYLVGAPAALLFGWLSDHVNRKRLLFAAVVLGEGPCMLTIFVTNYWQ 223
BLAST of mRNA_L-elsbetiae_contig12776.2228.1 vs. uniprot
Match: C1E4Y5_MICCC (Major facilitator superfamily n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E4Y5_MICCC) HSP 1 Score: 105 bits (263), Expect = 1.480e-24 Identity = 57/102 (55.88%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 22 SRSRTFTLGLLTLVVVLLFADQNLLAPNLSAVAEEFGFDELEKDRRLGGDIAIAFFGFGAPASLLIGWLTDL-VDRRNLFVAIVVVGELGALATVFVTTFSQ 324 R + +T+GLLTL +L+ADQNLLAPNLS AEEFGF E EKD +LGG + +AFF G+PASL+IGWL D + R LF V++GE LAT +V T+ Q Sbjct: 3 KREKWYTVGLLTLTAAMLYADQNLLAPNLSQAAEEFGFSEREKDVKLGGWLQLAFFVVGSPASLVIGWLADKPIPRTRLFFLTVLIGEGPCLATYWVKTYWQ 104
BLAST of mRNA_L-elsbetiae_contig12776.2228.1 vs. uniprot
Match: A0A7S0V9L3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V9L3_9CRYP) HSP 1 Score: 105 bits (263), Expect = 1.590e-24 Identity = 54/99 (54.55%), Postives = 72/99 (72.73%), Query Frame = 1 Query: 22 SRSRTFTLGLLTLVVVLLFADQNLLAPNLSAVAEEFGFDELEKDRRLGGDIAIAFFGFGAPASLLIGWLTDLVDRRNLFVAIVVVGELGALATVFVTTF 318 R TL LT+ LFADQN++APNL+A+A EFGF + E+D +LGG+I+ AFF G P +LL+GWLTDLV+R+ LFVA++ +G ALAT+ VT F Sbjct: 40 QRGTVITLCALTMF---LFADQNIMAPNLTAIAHEFGFSDRERDAKLGGEISFAFFVMGGPVALLVGWLTDLVERKVLFVALLFLGLCPALATILVTEF 135
BLAST of mRNA_L-elsbetiae_contig12776.2228.1 vs. uniprot
Match: A0A7S0I902_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I902_MICPS) HSP 1 Score: 105 bits (263), Expect = 2.510e-24 Identity = 57/102 (55.88%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 22 SRSRTFTLGLLTLVVVLLFADQNLLAPNLSAVAEEFGFDELEKDRRLGGDIAIAFFGFGAPASLLIGWLTDL-VDRRNLFVAIVVVGELGALATVFVTTFSQ 324 R + +T+GLLTL +L+ADQNLLAPNLS AEEFGF E EKD +LGG + +AFF G+PASL+IGWL D + R LF V++GE LAT +V T+ Q Sbjct: 62 KREKWYTVGLLTLTAAMLYADQNLLAPNLSQAAEEFGFSEREKDVKLGGWLQLAFFVVGSPASLVIGWLADKPIPRTRLFFLTVLIGEGPCLATYWVKTYWQ 163
BLAST of mRNA_L-elsbetiae_contig12776.2228.1 vs. uniprot
Match: A0A1Z5KAQ2_FISSO (MFS domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAQ2_FISSO) HSP 1 Score: 105 bits (263), Expect = 2.550e-24 Identity = 51/101 (50.50%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 22 SRSRTFTLGLLTLVVVLLFADQNLLAPNLSAVAEEFGFDELEKDRRLGGDIAIAFFGFGAPASLLIGWLTDLVDRRNLFVAIVVVGELGALATVFVTTFSQ 324 S + + L ++ +LLFADQNL++PNL+A+A+EF FD+ ++D++LGG+IA+AFF GAPAS L+G L D +R LF A V +GELG + T +V T+SQ Sbjct: 78 SMDKARAVALFSVCTILLFADQNLMSPNLTAIAKEFNFDDEQRDKKLGGEIALAFFVLGAPASYLVGCLGDAYNRTKLFAATVCIGELGCILTYWVQTYSQ 178 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12776.2228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12776.2228.1 >prot_L-elsbetiae_contig12776.2228.1 ID=prot_L-elsbetiae_contig12776.2228.1|Name=mRNA_L-elsbetiae_contig12776.2228.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp MYAWIFFSRSRTFTLGLLTLVVVLLFADQNLLAPNLSAVAEEFGFDELEKback to top mRNA from alignment at L-elsbetiae_contig12776:4281..5149- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12776.2228.1 ID=mRNA_L-elsbetiae_contig12776.2228.1|Name=mRNA_L-elsbetiae_contig12776.2228.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=869bp|location=Sequence derived from alignment at L-elsbetiae_contig12776:4281..5149- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12776:4281..5149- >mRNA_L-elsbetiae_contig12776.2228.1 ID=mRNA_L-elsbetiae_contig12776.2228.1|Name=mRNA_L-elsbetiae_contig12776.2228.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=666bp|location=Sequence derived from alignment at L-elsbetiae_contig12776:4281..5149- (Laminarionema elsbetiae ELsaHSoW15)back to top |