mRNA_L-elsbetiae_contig12761.2220.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12761.2220.1
Unique NamemRNA_L-elsbetiae_contig12761.2220.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 2.630e-116
Identity = 194/232 (83.62%), Postives = 201/232 (86.64%), Query Frame = 1 
Query:   10 LRAVSSLVSLSALATSSAFVAPGGNFLRAST-KTNAVTGALRCL---------RPAATSRRPPQARTMMMMSDATAEADVGEEAA-AAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDDS 672
            +RAVSSLVSLSALATSSAFVAPGGN +RAST KTNA   ALRCL         RP A  RRP   RTMMMMSDA   A   EEAA AAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLG G EEGPRTIVSGLVNFCEESDLLGR+VVVLCNLKPV+MKGV+SAGMLLCSSNEDHSKVEPLCPP GVPLGELVTF+GHLPSPVDAGNRAGKAWK+ASKTL VDDS
Sbjct:    1 MRAVSSLVSLSALATSSAFVAPGGNAIRASTGKTNAAM-ALRCLSRARLTSSVRPQAALRRPTAVRTMMMMSDA---AVTEEEAAPAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDS 228
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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A835YNH3_9STRA (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH3_9STRA)

HSP 1 Score: 213 bits (542), Expect = 4.320e-66
Identity = 107/164 (65.24%), Postives = 130/164 (79.27%), Query Frame = 1 
Query:  181 MMMMSDATAEADVGEEAA-AAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDD 669
            M M ++A+ E      A  AAP G+LTELARLE+R+G+IVEI RHPDAD LYVEK+D+G     GPRTIVSGLV +C E+DLL R+VV+L NLKPV+M+GV SAGM+LCSSN DH++V PL PP G PLGELVTFEGHL +PV+AGNRA KAWKK +KT+ V +
Sbjct:   52 MQMSTEASTEEGAAAAAEPAAPVGQLTELARLEMRVGRIVEIGRHPDADGLYVEKIDIGEPA--GPRTIVSGLVAYCSEADLLNRDVVILANLKPVNMRGVESAGMVLCSSNADHTQVAPLVPPEGTPLGELVTFEGHLAAPVEAGNRAVKAWKKVAKTVAVGE 213
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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.490e-54
Identity = 93/140 (66.43%), Postives = 114/140 (81.43%), Query Frame = 1 
Query:  238 APTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTL 657
            AP GELTEL+RLEIR GKI+EI+RHP+AD LYVEK+DLG    +GPRTIVSGLV +  E +LLGREVVVL NLKP ++KG++S GMLLC+SNEDH+ V+PL PP GV LGEL+TFEGH  +P   GNRAGKA+ + ++ L
Sbjct:  192 APKGELTELSRLEIRTGKILEISRHPEADGLYVEKIDLGEA--DGPRTIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTVVKPLSPPPGVALGELITFEGHRAAPEPPGNRAGKAFDRVAEEL 329
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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A7S3M138_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M138_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.630e-53
Identity = 95/147 (64.63%), Postives = 110/147 (74.83%), Query Frame = 1 
Query:  232 AAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDDS 672
            AA P+G+  E   LEIR+GKI+EI +HP+ADSLYVEKVDLG     GPRTIVSGLV FC    LL R+VVVLCNLKP + KG++S GMLLCSSN+   KVEPL PPAGVP GELV+FEGH+  P + GNRA KA+ K S   VV DS
Sbjct:   66 AAKPSGDSIEA--LEIRVGKILEIGKHPEADSLYVEKVDLGESS--GPRTIVSGLVEFCTAEYLLNRDVVVLCNLKPRAFKGINSQGMLLCSSNKADGKVEPLIPPAGVPAGELVSFEGHVIKPEEPGNRATKAYTKVSGDFVVSDS 208
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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 178 bits (452), Expect = 1.190e-52
Identity = 86/138 (62.32%), Postives = 107/138 (77.54%), Query Frame = 1 
Query:  253 LTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVD 666
            LTEL+RLEIR+GK+VE  RHPDAD+LYVEKVD+G   E+ PRTIVSGLVNF  + +L GR V+VLCNLKP +M+G+ S GMLLC+SNEDH+KV+PL  P    +G L+TFEGH  +P+DAGNRA KA+ K +     D
Sbjct:   68 LTELSRLEIRVGKVVECERHPDADTLYVEKVDVG---EDEPRTIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTKVDPLTAPPDAAIGSLITFEGHRAAPMDAGNRASKAFDKVASEFNTD 202
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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A7S0XDL6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL6_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.630e-51
Identity = 83/140 (59.29%), Postives = 108/140 (77.14%), Query Frame = 1 
Query:  250 ELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDD 669
            ELTEL+RLEIR+GKIVE+ RHP+AD LYVEK+DLG     GPRTIVSGLV FC    LL   V+VLCNLKP ++KG++S GM+LC++++D +KV+PL PP   P+G+L+TFEGHL  PV+ GNRA KA+ K +    V++
Sbjct:   51 ELTELSRLEIRVGKIVEVGRHPEADGLYVEKIDLGE--PTGPRTIVSGLVQFCTVDRLLNNNVIVLCNLKPRALKGITSNGMVLCTTSKDETKVDPLIPPPDAPIGQLITFEGHLSEPVEPGNRATKAFTKIADGFYVNE 188
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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR)

HSP 1 Score: 176 bits (447), Expect = 2.650e-51
Identity = 87/145 (60.00%), Postives = 111/145 (76.55%), Query Frame = 1 
Query:  238 APTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDDS 672
            AP   LTEL+RLEIR+GKI+E  +HPDAD+LYVEKVD+G   EE PRTIVSGLV +     ++GR VVVLCNLKP +M+GV+S GMLLC+SNEDH+ V+PLC P   P+GELVTFEGH  +P+D  NRA KA+ + +  L  +++
Sbjct:  110 APDLPLTELSRLEIRVGKIIECEKHPDADTLYVEKVDVG---EEEPRTIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTVVDPLCAPQDTPIGELVTFEGHKSAPIDPSNRATKAFDRVADGLSTNEA 251
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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A5J4Z2W6_PORPP (Putative methionine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W6_PORPP)

HSP 1 Score: 175 bits (443), Expect = 5.660e-51
Identity = 90/150 (60.00%), Postives = 113/150 (75.33%), Query Frame = 1 
Query:  226 EAAAAPTGE---LTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVD 666
            E AA   GE   LTEL+RLEIR+GKI++  +HP+ADSLYVE+VD+G   E G R IVSGLV+F    +++ R V+VLCNLKP +M+G+SS GMLLC+SNEDHS+V+PL  P GVP+G LVTFEGH   P  AGNRA KA+ K +K+L  D
Sbjct:   80 ETAAGNEGESLPLTELSRLEIRVGKIIKCEKHPEADSLYVEEVDVG--DESGARVIVSGLVSFVPLEEMVDRTVIVLCNLKPRNMRGISSHGMLLCASNEDHSQVDPLTAPEGVPIGALVTFEGHRSEPAPAGNRASKAFDKVAKSLRTD 227
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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A7S2V4I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I0_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.600e-50
Identity = 89/149 (59.73%), Postives = 111/149 (74.50%), Query Frame = 1 
Query:  223 EEAAAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDD 669
            +E AAAP GEL E +RLEIR+GKIV+++ HPDAD LYVEK+D G   E+ PRTIVSGLV + +  DLL R VVVL NLKP +M+G++S GMLLC+SNEDHS+V PL PP     GEL+T EG L  P++  NRA KA+ K +K L V+D
Sbjct:   73 KEEAAAPAGELNEFSRLEIRVGKIVDVSVHPDADGLYVEKIDCG---EDEPRTIVSGLVKYLKAEDLLDRSVVVLANLKPRAMRGITSHGMLLCASNEDHSQVVPLSPPESSVPGELITVEGTLSQPLEPCNRASKAFDKVAKDLYVND 218
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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A7S2R5F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5F0_9STRA)

HSP 1 Score: 170 bits (430), Expect = 3.040e-49
Identity = 82/145 (56.55%), Postives = 111/145 (76.55%), Query Frame = 1 
Query:  238 APTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDDS 672
            AP GE+TEL+RLEIR+GKI+E+A HP  + ++VEK+D+G   E+ PRTI SGL ++ +E DLL ++ +VLCNLKP  + GV S GM+LC+S+ +H+ V+ + PPAGV  GELVTF+GHL +PVDAGNRA KA+KK +     DDS
Sbjct:   68 APVGEMTELSRLEIRVGKILEVAVHPTKEKIFVEKIDVG---EDEPRTICSGLRDYLKEDDLLNKDCIVLCNLKPRDLDGVPSNGMVLCASDAEHTDVQLVVPPAGVAAGELVTFDGHLAAPVDAGNRAVKAFKKVAGLFKTDDS 209
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMW6_ECTSI2.630e-11683.62Endothelial monocyte-activating polypeptide II pro... [more]
A0A835YNH3_9STRA4.320e-6665.24Endothelial monocyte-activating polypeptide II pro... [more]
W7U6C4_9STRA1.490e-5466.43Endothelial monocyte-activating polypeptide ii pro... [more]
A0A7S3M138_9STRA1.630e-5364.63Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7S0ZE83_9RHOD1.190e-5262.32Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A7S0XDL6_9STRA1.630e-5159.29Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A2V3IUX7_9FLOR2.650e-5160.00Putative methionine--tRNA ligase n=1 Tax=Gracilari... [more]
A0A5J4Z2W6_PORPP5.660e-5160.00Putative methionine--tRNA ligase n=1 Tax=Porphyrid... [more]
A0A7S2V4I0_9STRA1.600e-5059.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2R5F0_9STRA3.040e-4956.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12761contigL-elsbetiae_contig12761:375..3156 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.9
Seed ortholog evalue1.4e-92
Seed eggNOG ortholog2880.D7FMW6
Preferred nameYARS
KEGG rclassRC00055,RC00523
KEGG koko:K01866
KEGG ReactionR02918
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categorychloroplast
GOsGO:0000049,GO:0001664,GO:0002682,GO:0002685,GO:0002688,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004831,GO:0005102,GO:0005126,GO:0005153,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0006915,GO:0006935,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009605,GO:0009966,GO:0009987,GO:0010467,GO:0010469,GO:0010646,GO:0010758,GO:0012501,GO:0016070,GO:0016604,GO:0016874,GO:0016875,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0023051,GO:0030334,GO:0030545,GO:0031974,GO:0031981,GO:0032101,GO:0032879,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034660,GO:0040011,GO:0040012,GO:0042056,GO:0042221,GO:0042330,GO:0042379,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045236,GO:0046483,GO:0048018,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0050918,GO:0050920,GO:0051270,GO:0051716,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1905521,GO:2000145
EggNOG free text desc.tRNA binding
EggNOG OGsCOG0143@1,KOG2241@2759
EC6.1.1.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Ec32 ortholog descriptionNucleic acid-binding, OB-fold
Ec32 orthologEc-09_002760.1
Exons5
Model size675
Cds size675
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12761.2220.1prot_L-elsbetiae_contig12761.2220.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12761 375..3156 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815464.1825593-CDS-L-elsbetiae_contig12761:374..5751622815464.1825593-CDS-L-elsbetiae_contig12761:374..575Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12761 375..575 -
1691682910.3967495-CDS-L-elsbetiae_contig12761:374..5751691682910.3967495-CDS-L-elsbetiae_contig12761:374..575Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12761 375..575 -
1622815464.1939056-CDS-L-elsbetiae_contig12761:1098..12721622815464.1939056-CDS-L-elsbetiae_contig12761:1098..1272Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12761 1099..1272 -
1691682910.4127128-CDS-L-elsbetiae_contig12761:1098..12721691682910.4127128-CDS-L-elsbetiae_contig12761:1098..1272Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12761 1099..1272 -
1622815464.205439-CDS-L-elsbetiae_contig12761:1698..18301622815464.205439-CDS-L-elsbetiae_contig12761:1698..1830Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12761 1699..1830 -
1691682910.4212372-CDS-L-elsbetiae_contig12761:1698..18301691682910.4212372-CDS-L-elsbetiae_contig12761:1698..1830Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12761 1699..1830 -
1622815464.2205288-CDS-L-elsbetiae_contig12761:2197..22891622815464.2205288-CDS-L-elsbetiae_contig12761:2197..2289Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12761 2198..2289 -
1691682910.4299645-CDS-L-elsbetiae_contig12761:2197..22891691682910.4299645-CDS-L-elsbetiae_contig12761:2197..2289Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12761 2198..2289 -
1622815464.2355263-CDS-L-elsbetiae_contig12761:3080..31561622815464.2355263-CDS-L-elsbetiae_contig12761:3080..3156Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12761 3081..3156 -
1691682910.4385629-CDS-L-elsbetiae_contig12761:3080..31561691682910.4385629-CDS-L-elsbetiae_contig12761:3080..3156Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12761 3081..3156 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12761.2220.1

>prot_L-elsbetiae_contig12761.2220.1 ID=prot_L-elsbetiae_contig12761.2220.1|Name=mRNA_L-elsbetiae_contig12761.2220.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
MVYLRAVSSLVSLSALATSSAFVAPGGNFLRASTKTNAVTGALRCLRPAA
TSRRPPQARTMMMMSDATAEADVGEEAAAAPTGELTELARLEIRIGKIVE
IARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLC
NLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPS
PVDAGNRAGKAWKKASKTLVVDDSK
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mRNA from alignment at L-elsbetiae_contig12761:375..3156-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12761.2220.1 ID=mRNA_L-elsbetiae_contig12761.2220.1|Name=mRNA_L-elsbetiae_contig12761.2220.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2782bp|location=Sequence derived from alignment at L-elsbetiae_contig12761:375..3156- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTATACTTGCGCGCTGTTTCGTCCCTCGTCTCTTTGTCGGCCCTGGC
TACCTCGTCGGCGTTCGTCGCTCCAGGTCAGTTTGTTGCGAACCTTCTGC
GGTCCGTTCATGGACATCGCCGAATCATGCGCGCTCAATTGTGCCGTTGT
GTCACACACAGGCAGGCCTCGCGGGAAAGGCATGCTACTACTTATGGCCT
GTGTACGATGTATTCGCGTGGTGATCCTTGCTCGTAAAATCGACGGAGTG
GGTGTCGGGGTGTCAGTACTTTCGACGAACTGGCCCAAGTGCAAACCGTA
GTATCTAGTAGTGCTGACTTGTACCGTAAATTTAGGTGACATAAGATACC
ACACCCCCTGGACAGATTTTCAAAGCTCGATTCCTCCCCAGCAAGAAGAG
TGCCAGTGCCAAAAAGGGTGGCGTTGGAAATATCTAGTCAAAGGCTGTCC
GAGAATGTGTCGTTTGGTGCTGGCAACCTCTTCGTTGCGGAGTAATGGAG
CTCTAAAATTCTGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTATG
TTCACCAGCAGGTGTATGCGCAGATGTATGTAGATTGTAGATAGACTAGA
AGCGTGGAGGCTACCGTAGGTGGCGTAAGATAGCACGCTGACATAAGATA
GTATATCCCGTACAAGAAAACACACTCAGTGGCGTGTTCCTTTTTACTCC
GAAATATTTTCTGTGTACATGCGTGTCTAAGTAACAAGGTAACAGAGCTC
GTGTTTTCGTGCGTGCTCTCTCTCTCTCCTTCTCTCTTGTGACATAAAGA
CCCACCGTCGCTTGTGTGCACCCACGCGTTTCTTTCATCTTTACCGCGTT
ACAACATACCCGGCAAGGTGGCAACTTCCTCCGCGCTAGCACCAAGACCA
ATGCCGTCACCGGGGCCCTGCGATGCCTCCGGCCAGCCGCAACGTCAAGG
CGACCCCCGGTAGGCCACGATATAACGAACGGTTACATAAGGACGGGTGC
AAGTGCCCTCTCTGATACCTGTACACCGCTGCTGTTCGCCACCATGACGG
TTTTGAAGTGTTCACAACTCTGGTATATATGTGGTACACGGCTGCTACTA
CTCTGTCGGTATGTACGTATAAATGTAGACTTATAATAGACTATGTAGCC
TTGTAATTCTTGACCACGCGTTGTGACCGTTAAAGCAACCAAAAAGTCTC
AAAACATGTTTTTTTTTGTTTTTCCACCGGCCGAGCACGCTCTCTTGCAA
TCAACTTATCTATATTCTACTTATGCGTCCTGCACGTACCGATCTTTTTT
CAAAAACAATATTGGCATGTGGGAAGCAGGCAAGGACGATGATGATGATG
TCCGATGCCACTGCGGAGGCAGACGTCGGGGAGGAGGCCGCCGCGGCACC
CACGGGGGAGCTGACGGAGCTGGCGCGGCTCGAAATTCGCATCGGGAAGA
TCGTGGAGGTGAGAGAGGCTTCATGGAGGGGGGGGGGGAAGGGGGGGGGG
CTGTTCGTCTTCTTCCCTCTTCCCCTTCCTCTCTCACCTCCAAGATGGTA
TCGCGGTACTTCCTGCCCTTCCGACGTCGGGCTTTGCGCCTCTTCTCTCT
CCCCCCTCCCTCCATCTCTCTCCGTGTGTAGATTCTGTTTGACCGCAGTT
CATGCCGGGAACCCCCGTTCAGATGATATCCCCCACGGCAGCACGTAAAT
AGCAGCACCCAACCCCAAAGCCGATTGTCACCCCCGTCCCGCAAAGACCT
CGGAATCGTGGCCAAGAGCTGGTGGTGTATGTCCACGCACGATACAGCCC
TCTTCATGTCAAGTGCCCGCCCTCGCCCCCCCCCTGTCTATGTTGTTCGT
TCGAACTGCTGCTGCTGCTGCTGTGGCCCCGCAGATCGCCCGGCATCCGG
ACGCCGACAGCCTGTACGTCGAGAAGGTCGACCTCGGGGCGGGAGGGGAG
GAGGGGCCGCGGACGATCGTGTCGGGCCTGGTGAACTTCTGCGAAGAGTC
GGACCTGCTGGGCCGGGAGGTGGTGGTGCTCTGCAACCTCAAGCCAGTCA
GCATGAAGGTCATTAAAAGAGAGGCGTGGGGGGGGGGGGGGGGGGGCTTT
TTTTTTTTGGGTTTGTGCGCCCTTGTTGGGGGTGGGTTTTGGGGGGGCCG
GGGGGGGGGGGGGGGGGGGGGGGGGGTGGGTGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGTCGTGAAGACAACCCACACGTAGTTACCTGT
CGGCGGACTGCTGTTTCATGTTTGCATTTGATGAACTTCGAAACATGCGC
TCCTTGGCAAAAAAATCGATGAACCCCACCATCCGGCCAACACTCAAGCA
CGCACACAGAGTAGCAGTAGAGACACGCTTCGTCCCCGCTCCCACCAACT
CTCGCCCCCGCCCTCTCCCCGCCCAAGGGGTCCAGCACAGAACAAAACGG
ACTCCCAAACGCCCCCGCCTCTCCTCCTGCCCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCTCCTACCCCTCCTCAGGGGGTGTCATCGGCTGGCA
TGCTGCTCTGCTCGAGTAACGAGGACCACAGCAAGGTGGAGCCCCTCTGC
CCCCCGGCGGGCGTGCCGCTCGGAGAGCTTGTGACCTTCGAGGGGCACCT
GCCGTCGCCCGTAGACGCGGGCAACCGGGCCGGCAAGGCCTGGAAGAAAG
CCTCCAAGACTCTGGTAGTGGACGACAGCAAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12761:375..3156-

>mRNA_L-elsbetiae_contig12761.2220.1 ID=mRNA_L-elsbetiae_contig12761.2220.1|Name=mRNA_L-elsbetiae_contig12761.2220.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1350bp|location=Sequence derived from alignment at L-elsbetiae_contig12761:375..3156- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTATACTTGCGCGCTGTTTCGTCCCTCGTCTCTTTGTCGGCCCTGGC
TACCTCGTCGGCGTTCGTCGCTCCAGATGGTATACTTGCGCGCTGTTTCG
TCCCTCGTCTCTTTGTCGGCCCTGGCTACCTCGTCGGCGTTCGTCGCTCC
AGGTGGCAACTTCCTCCGCGCTAGCACCAAGACCAATGCCGTCACCGGGG
CCCTGCGATGCCTCCGGCCAGCCGCAACGTCAAGGCGACCCCCGGTGGCA
ACTTCCTCCGCGCTAGCACCAAGACCAATGCCGTCACCGGGGCCCTGCGA
TGCCTCCGGCCAGCCGCAACGTCAAGGCGACCCCCGCAGGCAAGGACGAT
GATGATGATGTCCGATGCCACTGCGGAGGCAGACGTCGGGGAGGAGGCCG
CCGCGGCACCCACGGGGGAGCTGACGGAGCTGGCGCGGCTCGAAATTCGC
ATCGGGAAGATCGTGGAGCAGGCAAGGACGATGATGATGATGTCCGATGC
CACTGCGGAGGCAGACGTCGGGGAGGAGGCCGCCGCGGCACCCACGGGGG
AGCTGACGGAGCTGGCGCGGCTCGAAATTCGCATCGGGAAGATCGTGGAG
ATCGCCCGGCATCCGGACGCCGACAGCCTGTACGTCGAGAAGGTCGACCT
CGGGGCGGGAGGGGAGGAGGGGCCGCGGACGATCGTGTCGGGCCTGGTGA
ACTTCTGCGAAGAGTCGGACCTGCTGGGCCGGGAGGTGGTGGTGCTCTGC
AACCTCAAGCCAGTCAGCATGAAGATCGCCCGGCATCCGGACGCCGACAG
CCTGTACGTCGAGAAGGTCGACCTCGGGGCGGGAGGGGAGGAGGGGCCGC
GGACGATCGTGTCGGGCCTGGTGAACTTCTGCGAAGAGTCGGACCTGCTG
GGCCGGGAGGTGGTGGTGCTCTGCAACCTCAAGCCAGTCAGCATGAAGGG
GGTGTCATCGGCTGGCATGCTGCTCTGCTCGAGTAACGAGGACCACAGCA
AGGTGGAGCCCCTCTGCCCCCCGGCGGGCGTGCCGCTCGGAGAGCTTGTG
ACCTTCGAGGGGCACCTGCCGTCGCCCGTAGACGCGGGCAACCGGGCCGG
CAAGGCCTGGAAGAAAGCCTCCAAGACTCTGGTAGTGGACGACAGCAAGG
GGGTGTCATCGGCTGGCATGCTGCTCTGCTCGAGTAACGAGGACCACAGC
AAGGTGGAGCCCCTCTGCCCCCCGGCGGGCGTGCCGCTCGGAGAGCTTGT
GACCTTCGAGGGGCACCTGCCGTCGCCCGTAGACGCGGGCAACCGGGCCG
GCAAGGCCTGGAAGAAAGCCTCCAAGACTCTGGTAGTGGACGACAGCAAG
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