prot_L-elsbetiae_contig12761.2220.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig12761.2220.1
Unique Name	prot_L-elsbetiae_contig12761.2220.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	225

Homology

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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 2.630e-116
Identity = 194/232 (83.62%), Postives = 201/232 (86.64%), Query Frame = 0

Query:    4 LRAVSSLVSLSALATSSAFVAPGGNFLRAST-KTNAVTGALRCL---------RPAATSRRPPQARTMMMMSDATAEADVGEEAA-AAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDDS 224
            +RAVSSLVSLSALATSSAFVAPGGN +RAST KTNA   ALRCL         RP A  RRP   RTMMMMSDA   A   EEAA AAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLG G EEGPRTIVSGLVNFCEESDLLGR+VVVLCNLKPV+MKGV+SAGMLLCSSNEDHSKVEPLCPP GVPLGELVTF+GHLPSPVDAGNRAGKAWK+ASKTL VDDS
Sbjct:    1 MRAVSSLVSLSALATSSAFVAPGGNAIRASTGKTNAAM-ALRCLSRARLTSSVRPQAALRRPTAVRTMMMMSDA---AVTEEEAAPAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDS 228

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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A835YNH3_9STRA (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH3_9STRA)

HSP 1 Score: 213 bits (542), Expect = 4.320e-66
Identity = 107/164 (65.24%), Postives = 130/164 (79.27%), Query Frame = 0

Query:   61 MMMMSDATAEADVGEEAA-AAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDD 223
            M M ++A+ E      A  AAP G+LTELARLE+R+G+IVEI RHPDAD LYVEK+D+G     GPRTIVSGLV +C E+DLL R+VV+L NLKPV+M+GV SAGM+LCSSN DH++V PL PP G PLGELVTFEGHL +PV+AGNRA KAWKK +KT+ V +
Sbjct:   52 MQMSTEASTEEGAAAAAEPAAPVGQLTELARLEMRVGRIVEIGRHPDADGLYVEKIDIGEPA--GPRTIVSGLVAYCSEADLLNRDVVILANLKPVNMRGVESAGMVLCSSNADHTQVAPLVPPEGTPLGELVTFEGHLAAPVEAGNRAVKAWKKVAKTVAVGE 213

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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.490e-54
Identity = 93/140 (66.43%), Postives = 114/140 (81.43%), Query Frame = 0

Query:   80 APTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTL 219
            AP GELTEL+RLEIR GKI+EI+RHP+AD LYVEK+DLG    +GPRTIVSGLV +  E +LLGREVVVL NLKP ++KG++S GMLLC+SNEDH+ V+PL PP GV LGEL+TFEGH  +P   GNRAGKA+ + ++ L
Sbjct:  192 APKGELTELSRLEIRTGKILEISRHPEADGLYVEKIDLGEA--DGPRTIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTVVKPLSPPPGVALGELITFEGHRAAPEPPGNRAGKAFDRVAEEL 329

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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A7S3M138_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M138_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.630e-53
Identity = 95/147 (64.63%), Postives = 110/147 (74.83%), Query Frame = 0

Query:   78 AAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDDS 224
            AA P+G+  E   LEIR+GKI+EI +HP+ADSLYVEKVDLG     GPRTIVSGLV FC    LL R+VVVLCNLKP + KG++S GMLLCSSN+   KVEPL PPAGVP GELV+FEGH+  P + GNRA KA+ K S   VV DS
Sbjct:   66 AAKPSGDSIEA--LEIRVGKILEIGKHPEADSLYVEKVDLGESS--GPRTIVSGLVEFCTAEYLLNRDVVVLCNLKPRAFKGINSQGMLLCSSNKADGKVEPLIPPAGVPAGELVSFEGHVIKPEEPGNRATKAYTKVSGDFVVSDS 208

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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 178 bits (452), Expect = 1.190e-52
Identity = 86/138 (62.32%), Postives = 107/138 (77.54%), Query Frame = 0

Query:   85 LTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVD 222
            LTEL+RLEIR+GK+VE  RHPDAD+LYVEKVD+G   E+ PRTIVSGLVNF  + +L GR V+VLCNLKP +M+G+ S GMLLC+SNEDH+KV+PL  P    +G L+TFEGH  +P+DAGNRA KA+ K +     D
Sbjct:   68 LTELSRLEIRVGKVVECERHPDADTLYVEKVDVG---EDEPRTIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTKVDPLTAPPDAAIGSLITFEGHRAAPMDAGNRASKAFDKVASEFNTD 202

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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A7S0XDL6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL6_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.630e-51
Identity = 83/140 (59.29%), Postives = 108/140 (77.14%), Query Frame = 0

Query:   84 ELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDD 223
            ELTEL+RLEIR+GKIVE+ RHP+AD LYVEK+DLG     GPRTIVSGLV FC    LL   V+VLCNLKP ++KG++S GM+LC++++D +KV+PL PP   P+G+L+TFEGHL  PV+ GNRA KA+ K +    V++
Sbjct:   51 ELTELSRLEIRVGKIVEVGRHPEADGLYVEKIDLGE--PTGPRTIVSGLVQFCTVDRLLNNNVIVLCNLKPRALKGITSNGMVLCTTSKDETKVDPLIPPPDAPIGQLITFEGHLSEPVEPGNRATKAFTKIADGFYVNE 188

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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR)

HSP 1 Score: 176 bits (447), Expect = 2.650e-51
Identity = 87/145 (60.00%), Postives = 111/145 (76.55%), Query Frame = 0

Query:   80 APTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDDS 224
            AP   LTEL+RLEIR+GKI+E  +HPDAD+LYVEKVD+G   EE PRTIVSGLV +     ++GR VVVLCNLKP +M+GV+S GMLLC+SNEDH+ V+PLC P   P+GELVTFEGH  +P+D  NRA KA+ + +  L  +++
Sbjct:  110 APDLPLTELSRLEIRVGKIIECEKHPDADTLYVEKVDVG---EEEPRTIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTVVDPLCAPQDTPIGELVTFEGHKSAPIDPSNRATKAFDRVADGLSTNEA 251

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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A5J4Z2W6_PORPP (Putative methionine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W6_PORPP)

HSP 1 Score: 175 bits (443), Expect = 5.660e-51
Identity = 90/150 (60.00%), Postives = 113/150 (75.33%), Query Frame = 0

Query:   76 EAAAAPTGE---LTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVD 222
            E AA   GE   LTEL+RLEIR+GKI++  +HP+ADSLYVE+VD+G   E G R IVSGLV+F    +++ R V+VLCNLKP +M+G+SS GMLLC+SNEDHS+V+PL  P GVP+G LVTFEGH   P  AGNRA KA+ K +K+L  D
Sbjct:   80 ETAAGNEGESLPLTELSRLEIRVGKIIKCEKHPEADSLYVEEVDVG--DESGARVIVSGLVSFVPLEEMVDRTVIVLCNLKPRNMRGISSHGMLLCASNEDHSQVDPLTAPEGVPIGALVTFEGHRSEPAPAGNRASKAFDKVAKSLRTD 227

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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A7S2V4I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I0_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.600e-50
Identity = 89/149 (59.73%), Postives = 111/149 (74.50%), Query Frame = 0

Query:   75 EEAAAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDD 223
            +E AAAP GEL E +RLEIR+GKIV+++ HPDAD LYVEK+D G   E+ PRTIVSGLV + +  DLL R VVVL NLKP +M+G++S GMLLC+SNEDHS+V PL PP     GEL+T EG L  P++  NRA KA+ K +K L V+D
Sbjct:   73 KEEAAAPAGELNEFSRLEIRVGKIVDVSVHPDADGLYVEKIDCG---EDEPRTIVSGLVKYLKAEDLLDRSVVVLANLKPRAMRGITSHGMLLCASNEDHSQVVPLSPPESSVPGELITVEGTLSQPLEPCNRASKAFDKVAKDLYVND 218

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BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Match: A0A7S2R5F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5F0_9STRA)

HSP 1 Score: 170 bits (430), Expect = 3.040e-49
Identity = 82/145 (56.55%), Postives = 111/145 (76.55%), Query Frame = 0

Query:   80 APTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLCNLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPSPVDAGNRAGKAWKKASKTLVVDDS 224
            AP GE+TEL+RLEIR+GKI+E+A HP  + ++VEK+D+G   E+ PRTI SGL ++ +E DLL ++ +VLCNLKP  + GV S GM+LC+S+ +H+ V+ + PPAGV  GELVTF+GHL +PVDAGNRA KA+KK +     DDS
Sbjct:   68 APVGEMTELSRLEIRVGKILEVAVHPTKEKIFVEKIDVG---EDEPRTICSGLRDYLKEDDLLNKDCIVLCNLKPRDLDGVPSNGMVLCASDAEHTDVQLVVPPAGVAAGELVTFDGHLAAPVDAGNRAVKAFKKVAGLFKTDDS 209

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig12761.2220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FMW6_ECTSI	2.630e-116	83.62	Endothelial monocyte-activating polypeptide II pro...	[more]
A0A835YNH3_9STRA	4.320e-66	65.24	Endothelial monocyte-activating polypeptide II pro...	[more]
W7U6C4_9STRA	1.490e-54	66.43	Endothelial monocyte-activating polypeptide ii pro...	[more]
A0A7S3M138_9STRA	1.630e-53	64.63	Hypothetical protein n=2 Tax=Spumella elongata Tax...	[more]
A0A7S0ZE83_9RHOD	1.190e-52	62.32	Hypothetical protein n=2 Tax=Timspurckia oligopyre...	[more]
A0A7S0XDL6_9STRA	1.630e-51	59.29	Hypothetical protein n=1 Tax=Chromulina nebulosa T...	[more]
A0A2V3IUX7_9FLOR	2.650e-51	60.00	Putative methionine--tRNA ligase n=1 Tax=Gracilari...	[more]
A0A5J4Z2W6_PORPP	5.660e-51	60.00	Putative methionine--tRNA ligase n=1 Tax=Porphyrid...	[more]
A0A7S2V4I0_9STRA	1.600e-50	59.73	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S2R5F0_9STRA	3.040e-49	56.55	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002547	tRNA-binding domain	PFAM	PF01588	tRNA_bind	coord: 93..190 e-value: 2.1E-28 score: 98.3
IPR002547	tRNA-binding domain	PROSITE	PS50886	TRBD	coord: 87..193 score: 30.914
None	No IPR available	GENE3D	2.40.50.140		coord: 84..225 e-value: 2.8E-44 score: 152.8
None	No IPR available	PANTHER	PTHR11586	FAMILY NOT NAMED	coord: 33..224
None	No IPR available	PANTHER	PTHR11586:SF39	NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN	coord: 33..224
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..225
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.567
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 88..220

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig12761	contig	L-elsbetiae_contig12761:375..3156 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig12761.2220.1	mRNA_L-elsbetiae_contig12761.2220.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig12761 375..3156 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig12761.2220.1 ID=prot_L-elsbetiae_contig12761.2220.1|Name=mRNA_L-elsbetiae_contig12761.2220.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
MVYLRAVSSLVSLSALATSSAFVAPGGNFLRASTKTNAVTGALRCLRPAA
TSRRPPQARTMMMMSDATAEADVGEEAAAAPTGELTELARLEIRIGKIVE
IARHPDADSLYVEKVDLGAGGEEGPRTIVSGLVNFCEESDLLGREVVVLC
NLKPVSMKGVSSAGMLLCSSNEDHSKVEPLCPPAGVPLGELVTFEGHLPS
PVDAGNRAGKAWKKASKTLVVDDSK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002547	tRNA-bd_dom
IPR012340	NA-bd_OB-fold