mRNA_L-elsbetiae_contig1275.2207.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1275.2207.1
Unique NamemRNA_L-elsbetiae_contig1275.2207.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7S3XPP0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPP0_HETAK)

HSP 1 Score: 92.4 bits (228), Expect = 1.630e-17
Identity = 70/190 (36.84%), Postives = 95/190 (50.00%), Query Frame = 1 
Query:    1 LSLINRLLLQPFGAKNGQEAIVTAIQDFLGANRDPTIVLKQQKQLGEVADNMRAILVALESSSEGARGSPLPLLLLKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATR 570
            L  IN LL  P   +  ++ +  AI +FL AN DP+        L E  D++  +       +E  R S L + +LKV KVL+RKQ+NR  +    +  +   +SS    M + E ANVVLNMCYD+ NV  F++ GG  AL PL +S    L+ S                LGALQSV + K GR A R
Sbjct:    4 LDTINGLLRAPQALETRRDKLKEAIDNFLMANLDPS---NSPNLLHEAPDDIMPLFEVF--GTEVFRRSDLLVPMLKVAKVLMRKQANRALIQDAHVLSLIPVLSSPKNVMAAREAANVVLNMCYDSQNVSTFVQNGGARALLPLTQSADIHLQGS---------------ALGALQSVSYQKEGRSALR 173
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BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A836CNB1_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNB1_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.130e-16
Identity = 69/182 (37.91%), Postives = 92/182 (50.55%), Query Frame = 1 
Query:   67 TAIQDFLGANRDPTIVLKQQKQLGEVADNMRAILVALESSSEGARGSPLPLL-LLKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDM-VSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATRDSGIIGVVVRLL 606
            TA+  FL  N DP           EV D +  +L    +   GA  SP+ LL LL+VLK L+RK +NR+A G      +   +S+  L    +CECANVVLN+CY+T NV  F + GG+  L   +R            L P     +    LGALQS+CFD  GR+  R SG + +V  LL
Sbjct:   25 TAVDAFLRCNADPA--RSPNLNFPEVDDTV--LLYNAVAVGPGAH-SPVRLLSLLRVLKYLMRKPANRRATGPTCAATVAMLLSNEALSADCACECANVVLNLCYETANVGLFCKHGGMAGL---LR-----------MLSPSCSVALHVAALGALQSLCFDAAGRERARVSGAVDLVAALL 187
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BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: C1EIP6_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EIP6_MICCC)

HSP 1 Score: 85.1 bits (209), Expect = 3.140e-14
Identity = 88/315 (27.94%), Postives = 125/315 (39.68%), Query Frame = 1 
Query:   52 QEAIVTAIQDFLGANRD----PTIVLKQQKQLGEVADNMRAILVALESSSEGARGSPLPLLLLKVLKVLLRKQSNRKALGRP----GIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATRDSGIIGVVVRLL----------------EDDSPKVRARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSRALLLGSLGAVEFLADLLV-GRHVKSQISAAGALVNIVGPD 921
            +E +   +++F+ AN D    P +  +++ +LG +         +L +  +      L LL LK LK+L RK+ NR+  GR      ++L  T   ++    V+ E ANVVLN CY+  NV+H LE GGV    PL+R   +           G      +   GA+QSVCF  PGR   RD   +  +V L+                +D+    RAR                                                      SRAL     GAVE L  LL  GR   +Q  AAGAL+N +GPD
Sbjct:   28 REQVARTLREFVDANEDARASPNLRDERRDELGGIT--------SLLTDGDLPGDQDLALLALKTLKILSRKEDNRRRFGRELCRAVVRLALTHPRAS--HAVTAEGANVVLNACYEKENVEHVLECGGVQ---PLVRRVADT----------GESWRCRSAAAGAVQSVCFQAPGRCRVRDCDGVAALVALMKELDRREGGTRDSSFTDDERSMCRARVVGALHNVSADDDAIRLVRLSDGVPHLVRALGDVDDVVVNSAAGATQNVSRERASRALFRRH-GAVEALTKLLARGRDPATQARAAGALLNCLGPD 318
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BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7S0IGD7_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IGD7_MICPS)

HSP 1 Score: 79.3 bits (194), Expect = 2.820e-12
Identity = 85/317 (26.81%), Postives = 123/317 (38.80%), Query Frame = 1 
Query:   52 QEAIVTAIQDFLGANR----DPTIVLKQQKQLGEVADNMRAILVALESSSEGARGSPLPLLLLKVLKVLLRKQSNRKALGRP----GIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATRDSGIIGVVVRLL------------------EDDSPKVRARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSRALLLGSLGAVEFLADLLV-GRHVKSQISAAGALVNIVGPD 921
            +E +   +++F+ AN      P +  +++ +LG +         +L +  +      L LL LK LK+L RK+ NR+  GR      ++L  T   ++    V+ E ANVVLN CY+  NV++ LE GGV  L   +    E L+               +   GA+QSVCF  PGR   RD   +  +V L+                  +D+    RAR                                                      SRAL     GAVE L  LL  G    +Q  AAGAL+NI+GPD
Sbjct:   55 REQVARTLREFVDANEGARASPNLRDERRDELGGIT--------SLLTDGDLPGDQDLALLALKTLKILSRKEDNRRRFGRELCRAVVRLALTHPRAS--HAVTAEGANVVLNACYEKENVEYVLECGGVEPLVRRVADTGETLRCR-------------SAAAGAVQSVCFQAPGRCRVRDCDGVAALVALMKELDRASMPRDGSAGRFTDDERSMCRARVVGALHNVGADDDAIRAIRACDGIPHLVRALGDVDDGVCGSAAGATQNVSRERASRALFRRG-GAVEALTKLLARGCDPATQARAAGALLNILGPD 347
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BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A5B8MZ58_9CHLO (ARM repeat domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MZ58_9CHLO)

HSP 1 Score: 77.4 bits (189), Expect = 7.430e-12
Identity = 60/207 (28.99%), Postives = 97/207 (46.86%), Query Frame = 1 
Query:   52 QEAIVTAIQDFLGANRDPTIVL----KQQKQLGEVADNMRAILVALESSSEGARGSPLPLLLLKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDMV------SCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGR-DATRDSGIIGVVVRLLEDDSPKVRARA 639
            +E +   ++ F+  N +P+       +++  LG + + + +++   +  S            L  LK+L RKQ NR+A+   G + +     ++C D V      + ECANV+LN CY+  NV  FL  GGV  L   + SE   ++A+                 GALQSV + + GR +     G++  +V LL    PKVRARA
Sbjct:   51 EEGLTRKLETFVKENAEPSTSSNYKSEEEDDLGPLMELVGSVIDDHDLMSSA----------LTCLKILSRKQRNRRAIVLTGFKHL-----ASCADFVRNVPTLAAECANVLLNFCYERQNVGLFLSCGGVKVLETYLESEDRGVQAN---------------AAGALQSVSYHEEGRKELLASEGLLPRIVNLLASQEPKVRARA 227
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BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7S0MWF1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWF1_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 3.130e-8
Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 1 
Query:  217 LLLLKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKAS 468
            LLLLKV K+L RKQ NR  LG   I+ +  F+       ++ E ANV+LN CY+  NV   L  GGV AL   + +E ++L+A+
Sbjct:    3 LLLLKVFKILSRKQQNRAKLGEGVIKAVVKFLEKPKTSKIAGEGANVILNACYEKENVDIVLNCGGVKALVGFLTTEDQELQAN 86
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BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7S1CKE5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKE5_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.770e-7
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 1 
Query:  136 GEVADNMRAILVALESSSEGARGSPLPLLLLKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKAS 468
            G  AD+M A L  L  ++  +  + L  +LL + K+LLRK  NR+ +G  GI+ I   M       V+   ANV+LN+CY++ NV   L++GG   L  L++S  E L AS
Sbjct:   98 GADADDMAA-LTRLLGAAHASGDAELAEVLLCMFKILLRKLGNRRGIGEIGIKTIVNVMRDPPNGKVAKAGANVMLNLCYESDNVDTVLDMGGADPLVRLLQSPDEDLCAS 207
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BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7S0PQ95_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PQ95_MICPS)

HSP 1 Score: 61.2 bits (147), Expect = 4.940e-7
Identity = 59/207 (28.50%), Postives = 76/207 (36.71%), Query Frame = 1 
Query:  334 VSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATRDSGIIGVVVRLL----------EDDSPKVRARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSRALLLGSLGAVEFLADLLV-GRHVKSQISAAGALVNIVGPD 921
            ++ E ANVVLN CY+  NV++ LE GGV  L   +    E L+               +   GA+QSVCF   GR   RD   +  +V L+          +D+    RAR                                                      SRAL     GAV  L  LL  GR   +Q  AAGAL+NI+GPD
Sbjct:   11 ITAEGANVVLNACYEKENVEYVLECGGVEPLVRRVADTGETLRCR-------------SAAAGAVQSVCFQAAGRCRVRDCDGVAALVALMKELDRLSNVTDDERVMCRARVVGALHNVSADDDAIRLIRACDGVPHLVRLLSDDDDGVCGSAAGATQNVSRERASRALFRRG-GAVHALTKLLARGRDPATQARAAGALLNILGPD 203
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BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7R9VV28_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VV28_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 3.220e-6
Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 1 
Query:  217 LLLLKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVG 411
            LLLLKVLK+L RK SNR ALG  G++ +   +SS     V+ E ANV+LN CY+  NV   L+ G
Sbjct:   91 LLLLKVLKILSRKASNRLALGADGVRALLAHLSSPLSQPVAAEGANVLLNACYEPENVALLLQTG 155
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BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A2K1L8Q7_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L8Q7_PHYPA)

HSP 1 Score: 58.9 bits (141), Expect = 9.070e-6
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 1 
Query:  226 LKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDM-VSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQL 459
            L  LKVL RK++NRKALG+  I  +   +S   +D  +  E ANVVLN+CY+  NV+  L  GG   L   + S+ E+L
Sbjct:   45 LTQLKVLSRKETNRKALGQKAIAQLLKHLSDHSVDTKILAEGANVVLNVCYERDNVRALLACGGASTLVEFLTSKDEEL 123
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A7S3XPP0_HETAK1.630e-1736.84Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836CNB1_9STRA1.130e-1637.91Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
C1EIP6_MICCC3.140e-1427.94Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
A0A7S0IGD7_MICPS2.820e-1226.81Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A5B8MZ58_9CHLO7.430e-1228.99ARM repeat domain-containing protein n=1 Tax=Chlor... [more]
A0A7S0MWF1_9CHLO3.130e-842.86Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A7S1CKE5_9STRA2.770e-737.84Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S0PQ95_MICPS4.940e-728.50Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7R9VV28_9CHLO3.220e-650.77Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A2K1L8Q7_PHYPA9.070e-643.04Uncharacterized protein n=3 Tax=Physcomitrium pate... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1275contigL-elsbetiae_contig1275:1631..7400 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score78.6
Seed ortholog evalue5.3e-12
Seed eggNOG ortholog296587.XP_002506791.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Armadillo/beta-catenin-like repeats
EggNOG OGs2E34T@1,2SA9J@2759,37WJK@33090
COG Functional cat.S
Best tax levelViridiplantae
Best eggNOG OGNA|NA|NA
Exons11
Model size1361
Cds size852
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815462.6470735-UTR-L-elsbetiae_contig1275:1630..19861622815462.6470735-UTR-L-elsbetiae_contig1275:1630..1986Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1275 1631..1986 -
1691682909.562648-UTR-L-elsbetiae_contig1275:1630..19861691682909.562648-UTR-L-elsbetiae_contig1275:1630..1986Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1275 1631..1986 -
1622815462.8012686-UTR-L-elsbetiae_contig1275:6719..67311622815462.8012686-UTR-L-elsbetiae_contig1275:6719..6731Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1275 6720..6731 -
1691682909.6663842-UTR-L-elsbetiae_contig1275:6719..67311691682909.6663842-UTR-L-elsbetiae_contig1275:6719..6731Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1275 6720..6731 -
1622815462.8492146-UTR-L-elsbetiae_contig1275:6904..70051622815462.8492146-UTR-L-elsbetiae_contig1275:6904..7005Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1275 6905..7005 -
1691682909.6757817-UTR-L-elsbetiae_contig1275:6904..70051691682909.6757817-UTR-L-elsbetiae_contig1275:6904..7005Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1275 6905..7005 -
1622815462.8594694-UTR-L-elsbetiae_contig1275:7360..74001622815462.8594694-UTR-L-elsbetiae_contig1275:7360..7400Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1275 7361..7400 -
1691682909.685654-UTR-L-elsbetiae_contig1275:7360..74001691682909.685654-UTR-L-elsbetiae_contig1275:7360..7400Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1275 7361..7400 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815462.657351-CDS-L-elsbetiae_contig1275:1986..20551622815462.657351-CDS-L-elsbetiae_contig1275:1986..2055Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 1987..2055 -
1691682909.5767844-CDS-L-elsbetiae_contig1275:1986..20551691682909.5767844-CDS-L-elsbetiae_contig1275:1986..2055Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 1987..2055 -
1622815462.6721141-CDS-L-elsbetiae_contig1275:2429..24861622815462.6721141-CDS-L-elsbetiae_contig1275:2429..2486Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 2430..2486 -
1691682909.5920267-CDS-L-elsbetiae_contig1275:2429..24861691682909.5920267-CDS-L-elsbetiae_contig1275:2429..2486Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 2430..2486 -
1622815462.6857853-CDS-L-elsbetiae_contig1275:3088..32681622815462.6857853-CDS-L-elsbetiae_contig1275:3088..3268Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 3089..3268 -
1691682909.6052852-CDS-L-elsbetiae_contig1275:3088..32681691682909.6052852-CDS-L-elsbetiae_contig1275:3088..3268Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 3089..3268 -
1622815462.696456-CDS-L-elsbetiae_contig1275:3541..36691622815462.696456-CDS-L-elsbetiae_contig1275:3541..3669Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 3542..3669 -
1691682909.6141994-CDS-L-elsbetiae_contig1275:3541..36691691682909.6141994-CDS-L-elsbetiae_contig1275:3541..3669Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 3542..3669 -
1622815462.7074335-CDS-L-elsbetiae_contig1275:4296..43551622815462.7074335-CDS-L-elsbetiae_contig1275:4296..4355Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 4297..4355 -
1691682909.6221194-CDS-L-elsbetiae_contig1275:4296..43551691682909.6221194-CDS-L-elsbetiae_contig1275:4296..4355Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 4297..4355 -
1622815462.7182193-CDS-L-elsbetiae_contig1275:4632..47391622815462.7182193-CDS-L-elsbetiae_contig1275:4632..4739Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 4633..4739 -
1691682909.6300418-CDS-L-elsbetiae_contig1275:4632..47391691682909.6300418-CDS-L-elsbetiae_contig1275:4632..4739Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 4633..4739 -
1622815462.7287414-CDS-L-elsbetiae_contig1275:5394..54671622815462.7287414-CDS-L-elsbetiae_contig1275:5394..5467Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 5395..5467 -
1691682909.6381328-CDS-L-elsbetiae_contig1275:5394..54671691682909.6381328-CDS-L-elsbetiae_contig1275:5394..5467Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 5395..5467 -
1622815462.740763-CDS-L-elsbetiae_contig1275:5720..58211622815462.740763-CDS-L-elsbetiae_contig1275:5720..5821Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 5721..5821 -
1691682909.6477153-CDS-L-elsbetiae_contig1275:5720..58211691682909.6477153-CDS-L-elsbetiae_contig1275:5720..5821Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 5721..5821 -
1622815462.752345-CDS-L-elsbetiae_contig1275:6641..67191622815462.752345-CDS-L-elsbetiae_contig1275:6641..6719Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 6642..6719 -
1691682909.6570287-CDS-L-elsbetiae_contig1275:6641..67191691682909.6570287-CDS-L-elsbetiae_contig1275:6641..6719Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1275 6642..6719 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1275.2207.1prot_L-elsbetiae_contig1275.2207.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1275 1987..6719 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1275.2207.1

>prot_L-elsbetiae_contig1275.2207.1 ID=prot_L-elsbetiae_contig1275.2207.1|Name=mRNA_L-elsbetiae_contig1275.2207.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=284bp
MRAILVALESSSEGARGSPLPLLLLKVLKVLLRKQSNRKALGRPGIQLIT
TFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKE
QLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATRDSGIIGVVVRL
LEDDSPKVRARALGTIHNLSTDARSIGIIREEGGLPRLVRLLRSHEAQVC
GGAAGAIQNLSREEKSRALLLGSLGAVEFLADLLVGRHVKSQISAAGALV
NIVGPDARGSKRELLRSVLTDGLVLGVIESCLA*
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mRNA from alignment at L-elsbetiae_contig1275:1631..7400-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1275.2207.1 ID=mRNA_L-elsbetiae_contig1275.2207.1|Name=mRNA_L-elsbetiae_contig1275.2207.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5770bp|location=Sequence derived from alignment at L-elsbetiae_contig1275:1631..7400- (Laminarionema elsbetiae ELsaHSoW15)
CTCAGTTTGATCAATCGGCTACTACTGCAGCCTTTTGGAGGTGCGTTTTT
CCGCATTTGGCTGACGGTGACATCCACTGCCACGCGCTCGCGTTCTCTCC
TAGAGAGCGGATTTGTTGAACGTAATTTTAGATACGCGACTTCTCCGTGT
TGCGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCAGAACAAAAT
ACGAACAGAGCAGCAAAGCAAACATGCCACTCATAGGTTCATATCCACCA
CCTTGCCATCCGTAGGCTGCTACATTATAGAACTACAGCGACCGCGTTCA
ATTATGCGATGTCTGGTCGGACTGCATGAAGTGACTGATTTTACTCCTTG
CTGCTGTATTGTGCAATCCCCCCTGCCCATCGGCCACGCCAACAGCAAAG
AATGGTCAAGAAGCTATTGTCACGGCCATTCAGGATTTTCTTGGGGCCAA
CAGGGACCCGACGATAGTGCTGAAACAACAGAAACAGCTCGGCGAGGTAC
GCGCTTTTTCAGGAAAACACATCTACATACATACAGCGTAGTAGAAGTGG
TCTACGTAGAGCGTAATAATGTGGGACACAGCTCATGTATGTTTTCGTCC
CATTTACTACGTATATCTGTCCTAAGTCTCGACGTGGTGCTGCGTACCAC
ACGACGGATGCAACTGCAGGTAGCGGATAACATGAGGGCAATCTTGGTCG
CGCTCGAATCGTCGTCGGAGGGTGCGCGGGGAAGCCCTCTCCCGCTGCTG
CTTTTGAAGGTGAAAGCACAGCATTAGGAAAAGATTGTGTGACGCCATAC
CACGAAGTGCACGTATCGCGTACTAAGAAGAATCCTCCCAGGCTTTGGAC
ACACGCTGGGCACACACACTTTGACGATCAGCCCCCCATTCAAATGCCTG
ACACGAATGTTTAGCTATGTTGTTCCTTCGAAATTTGTACTAATTTCTCT
CTACCGGGTCCGGGGAAGAATATGACTGGATATTCACGAGAGTAGACTCC
GGTCCGCTCTCTCTCATCCAGTAAACGATTCTTCCCCTGTCAAGCGAGCA
GGCCAGAAATAAATCTCGTCTCGGTCAACGAGCCCCCAGATGGTACTAGA
CAGACCATCAGCATTCAACCCATTTTGGCCTTTGCCGCTCCCTGGCAAAT
TATATCATAAATCATTACTCAAACCCCACCCTTCTCTTTCTGTGTCCTAC
ATTGCACCCGACTCCCCCCCCCCCCCCCCCTTTTCGAAGGAAAGTAAAGG
TTAGGGTGGGTGGGAAATCTTCAACACCGGCTTGGAAGCGCTGCTATCTC
TGGACAGCGGTAGCCGTGTCGGCTGCTCGTTCGTTTCGTCTCTTTCTGCT
TATCGAGCCCTTGTTAACGAACGCGTGACTAAGCCTACCAAGAATGACTC
AGGGGGGGGGGGGGCGAGGCCGCTTTCTAGGGGGCCCATCCCTCTCCTTC
TAGGCTAATAGAGATATCCAAAAATTGTATACCATCTCCGGCCCCCATAA
AATCACGTTTCACGCTCCCTCTATGGAGTCTGCTCGAAACACTCGCTTTT
GACGAAACGTACGGATTCCATATATCCAGGTCTTGAAGGTTCTCCTGCGA
AAACAGTCAAACCGAAAGGCTCTGGGCCGGCCAGGGATCCAACTTATCAC
CACCTTTATGAGTTCGACCTGTTTGGACATGTGAGGGGCGCGTTGGGGAT
GCGGGGAGGAGGCAGGGGTAGCACGTACTTGTGAGCGGCGTTCCCTCACT
GCGAACCCGCACTTTCAAGCACACAGCCACAATCAATTAGACTAGTGCGC
GTGGTCCACCCATAATATATTTCATATGACTTTGCCTGCAAGCTCCCCCC
TCCTTCCATCCGCTCCCTTCCTGAACCCCCCCTGCCCGCGCTCTCCGCCT
CGTCCACCTCTTCTTCGCGCCTGCTTTTTTCAGGGTGTCTTGCGAGTGCG
CGAACGTGGTGCTGAATATGTGCTACGATACCGGGAATGTGCAGCACTTC
TTGGAGGTCAGTTAGTTTCGACGGGCGCCAAGACCAAGCATTGCGCAGTT
GATGATGATAACGCCCTCAATCGTCATTGAGGTTTCGTGTCTTGCCCAAC
TTTACTTCTCTTGGTCCACAGCAAACTAGATCACTGCTGAAACATGCGAG
GTGCGACACGTCTCCGGGAACGCGCAGCGCTTTTGTGGTGCGCTAATGCC
CACAGCGAACCAATTGCATTCGGACTTCCCCCAAAGCTATGTGATGGGGT
ATCGCAACTTTCGGCGGTGGTTCAGAAGTACACTGCGCACCAAGCTGAAG
TTTGTCAGCGTCGTAGCATAGGCCCAGCACTCTTTGCGAGGTTAAATATC
CACCGCAGTGGAAATTCTCGAGGTAGTCCGGCAGGCTTCACTATTTCTCG
ACGTCGCCGATGCTTCTGAACGCGTAACGCGCGCGACTCACCACTCCACG
CTCCCTGTCCCACCTCCGCAACCACCACCCGCGTGAGCCCCATTTTCAAA
TTGACATTGAATGGTTGTAGTTGATAGGCGCAGTTTGCTCGCTTGCTTCA
TTCCGAAGCAGGGCGCCACCAACGGTCCAAAGGCAGAAAAGCCAAACCAC
AAATGGCCCCCGCCCGCTTCCTGGCTCTCTTTCCGTACACTTCGTTGTTG
CCGAGCTTCAGGTTGGCGGCGTGGGAGCGCTTGGACCCTTGATACGCTCC
GAGAAAGAGCAACTGAAGGCAAGCAAACCACAACTTCCTCCGGGTCTCGG
TTCCGAAATACTGGCACCGTTCCACGAGAGGTTTGCCCGTGGTCCGGCAA
TGTACTCTTATATTTCCAAGTGGGAGGTTAAGGCTGTGCCCACGCACGAC
GGACGCATTCGCACCCTGTATCTGGTCTATACGCACGCACTTCAAAAGTC
GTGCGGGTGTGGTTTGCCTGCTTCCCTCTGCAGCCTGTTTCGCTATTTTT
CTCGCACTGCTGTGTACATAGTGCGGTTCTCACCCCACCCGGCCCCCCTT
CCTCCCCCTCCTTCCCCCTTTCGGCCCACCCACCCTTCAGGCTAGCGGGC
TCGGGGCGCTGCAGAGCGTGTGCTTCGACAAACCTGGCAGGGATGCCACT
CGAGGTACATTAACCTGGCTTATAGTCTATAGACTATGTTGTGGCCACGA
TTCAATCGAGAAATGTCAAGATGGGCCGAGAGCTTTGTCTTTGCTCCTTT
CCGTTCTATCCGGGGAAACAAGTTTCGTTGGCTCGTTTGTAGCGATGTGG
CTCGGTCCTACTCAGGTACTACCAATCCATGCTTCTGTTTTCTTCTGTGC
GAAGCGATGTGATTGGAACCATCATCAGACTACATGTAGCTTCAAGATTA
CAGAGATGAGGCTCGTACACGGATGATATGTAGGGGTAAAACCCCACTGA
AACCAACGGACACCCAGTAGTGGTCCCGTCTGCTTGGTGTGAACGGTGAG
ACTTGCTCATTATGCGCCGGTTTTGCTCCGGCTCCGCTTGGCTTGACCAA
TACATATAGCTTGACTCCTTGCGATGATCTGTTTTGATGCTGGGCAGGCA
TCAACGATGCGATGGTGAGCCCGTCGACGGAGAGACATACGAAGTACAAA
GCAAACAGACAGAGCAAACCGGCGTTTTTTTCAGTGACGGCCCAATGCTG
TCTACGACAGGCAAAAACTGATAGATTCAAAGTTACTCGCGGTTGCCGAA
ACGTTCGTGCGTTTGTCGGTGGGTCAACCAGACAGCGGGATAATAGGCGT
GGTGGTTCGCCTGCTGGAAGACGACAGCCCCAAAGTTCGAGCAAGGGCGC
TGGGCACCATCCACAACCTCAGCACCGACGCCCGAAGCATCGGGATTATT
CGGGAGGAGGTGAACTTGACAGCGCCGACGGGGGTTTTGACGGAGAAGGG
GTGCGGGTTGGGTAGGTACTCGGCACGTAGCTTCCCACTTTTTGGCCTAA
CAGAGTTCTCGAGCTCAGTAGTACCGATGCTTGAAGCGCCGAATTTCCAC
GAAAATCGTCGAGAGAAGACAGGAGGGAGGGAGGGAGGGAGGGTGATCGA
GACAAACACGACGAGAAAAACAACAGCAACAAAACACTTGCATGCGTCCA
AAAACGCGCGCCCAAACCCACCCTCAAAATAGGGAGGCTTGCCGCGACTG
GTACGGCTTCTGCGATCTCACGAGGCGCAAGTATGCGGAGGGGCGGCGGG
GGCGATCCAGAACCTCTCAAGGGAGGAGAAGAGCCGCGCGCTGCTGCTTG
GTAGCCTTGGAGCGGTCGAATTCTTGGCAGATTTGCTAGTAGGGCGGCAT
GTGAAGAGCCAGGTGGGAAGTTTGGCTGGTACATATGTACATATGATCCG
AAAGGCAGACTGAATGCCCCAGGCTTGCAAGGCAGCAATGATGCTTTGAC
ACTATATATGTAAGAAACCGTGAAGTGATTTGTTTTACCCTCCACCGTAG
GCAGCGCGGTTCCTCTATTGCGTAGTGTAGGCGAAGAAGCCGTGCCCAGC
TTCCGCTCCCTGGCTCCCGGGGTGATATTCAACGAAGTCAAGTGAAGAGG
TTACGTCGTCATCGACATAAATTTGATTTCCGCTATCCGAACACCCGCAC
GAACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTGCAACTG
TTAAAACTTCCGTCAAAGACTCAACAGCCAGTGTCACAGTGAGGTGCATT
TTTTCATGCAGTCGAAACACGCAACGATGTAGTCACGTGAGCTTTTGACA
AGCGTGGGTGCACAAATGTCTCTGGGATTCTTACGATATTACATATCTGC
CATTTGCCGGTATTTGTTTCTCGCTCCCTCCGTCCCTCCATCCCTCTACC
CTTCCCCCTTCCCTTTGTCTATTCTCTCTCCGCTGTGTGGCGGCGGTGCC
GGTGCAAATCATAGATTTCTGCGGCTGGTGCGTTGGTTAATATCGTCGGC
CCGGACGCGCGAGGAAGCAAGGTGAGACACGCGCATTCAAAAGGCACCGA
AGGAAGAGATACAGATAAACGACCGCCATAGTCTATACTTTTACCTGGGG
GACTACAGACTACAGACAACGGCCCCATCTAACACCTAGCTTCCTTGACA
CGTTCAGACCTTGTAGTCTGAAAACACACGAGTCTTGGTTTATAAATAAA
GCACATCAGGCGGTAGCCATATACAGCGCCGACCGCCAAAACTGATGTTT
ATTATGCGCATCAGGCGGTAGTCACACACAGCGCCGGCCACCAAAACTCG
TTTGATCCACTATTAAAAAACATTCCAAGCTCTCTCTTCCCTGGACCGAC
CACCGCGCCCGCCCGCCTGCCTCACTTGCCGCTAATACCGCCCAGCGTGA
GTTGCTGCGCAGCGTGCTGACGGACGGGCTCGTGCTCGGGGTCATCGAGA
GCTGTTTGGCGTAATGTAGAAAAATAAGCTCTCTTGTTCGGTCGTTTTAC
TCCGGGCGAGCGATTAGAGCCCCCCTGAATACCGTAACAAAGTGTGTGTT
GTTCGTGCTGCTGGCGGTCGTTTCTCGTCTTTTCCCCGTGTCGCTTTGGC
GGCGGCGACTGTCGGTCGTGAAGTGTTGGCGGCGGGTTCGGCCCGAAGCG
TTGTCGTGCACGTTGCGTTGGTGTTGCGCCAGATCTTGGTGGTGGTGTTT
GTGTATGTAGGGCTGCCTACATTGCATTTTTGTCGACACATTTGGGGTGG
CCCTCTCGTGTACTCTGGCTTGAAATCTACCTTTGTTTGTCTAGATTGGT
TGTAATCTTCTCCGTGGTGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1275:1631..7400-

>mRNA_L-elsbetiae_contig1275.2207.1 ID=mRNA_L-elsbetiae_contig1275.2207.1|Name=mRNA_L-elsbetiae_contig1275.2207.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1704bp|location=Sequence derived from alignment at L-elsbetiae_contig1275:1631..7400- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGGGCAATCTTGGTCGCGCTCGAATCGTCGTCGGAGGGTGCGCGGGG
AAGCCCTCTCCCGCTGCTGCTTTTGAAGATGAGGGCAATCTTGGTCGCGC
TCGAATCGTCGTCGGAGGGTGCGCGGGGAAGCCCTCTCCCGCTGCTGCTT
TTGAAGGTCTTGAAGGTTCTCCTGCGAAAACAGTCAAACCGAAAGGCTCT
GGGCCGGCCAGGGATCCAACTTATCACCACCTTTATGAGTTCGACCTGTT
TGGACATGTCTTGAAGGTTCTCCTGCGAAAACAGTCAAACCGAAAGGCTC
TGGGCCGGCCAGGGATCCAACTTATCACCACCTTTATGAGTTCGACCTGT
TTGGACATGGTGTCTTGCGAGTGCGCGAACGTGGTGCTGAATATGTGCTA
CGATACCGGGAATGTGCAGCACTTCTTGGAGGGTGTCTTGCGAGTGCGCG
AACGTGGTGCTGAATATGTGCTACGATACCGGGAATGTGCAGCACTTCTT
GGAGGTTGGCGGCGTGGGAGCGCTTGGACCCTTGATACGCTCCGAGAAAG
AGCAACTGAAGGCAAGCAAACCACAACTTCCTCCGGGTCTCGGTTCCGAA
ATACTGGCACCGTTGGCGGCGTGGGAGCGCTTGGACCCTTGATACGCTCC
GAGAAAGAGCAACTGAAGGCAAGCAAACCACAACTTCCTCCGGGTCTCGG
TTCCGAAATACTGGCACCCGGGCTCGGGGCGCTGCAGAGCGTGTGCTTCG
ACAAACCTGGCAGGGATGCCACTCGAGCGGGCTCGGGGCGCTGCAGAGCG
TGTGCTTCGACAAACCTGGCAGGGATGCCACTCGAGACAGCGGGATAATA
GGCGTGGTGGTTCGCCTGCTGGAAGACGACAGCCCCAAAGTTCGAGCAAG
GGCGCTGGGCACCATCCACAACCTCAGCACCGACGCCCGAAGCATCGGGA
TTATTCGGGAGGAGACAGCGGGATAATAGGCGTGGTGGTTCGCCTGCTGG
AAGACGACAGCCCCAAAGTTCGAGCAAGGGCGCTGGGCACCATCCACAAC
CTCAGCACCGACGCCCGAAGCATCGGGATTATTCGGGAGGAGGGAGGCTT
GCCGCGACTGGTACGGCTTCTGCGATCTCACGAGGCGCAAGTATGCGGAG
GGGCGGCGGGGGCGATCCAGAACCTCTCAAGGGAGGAGAAGAGCCGCGCG
CTGCTGCTTGGTAGCCTTGGAGCGGTCGAATTCTTGGCAGATTTGCTAGT
AGGGCGGCATGTGAAGAGCCAGGGAGGCTTGCCGCGACTGGTACGGCTTC
TGCGATCTCACGAGGCGCAAGTATGCGGAGGGGCGGCGGGGGCGATCCAG
AACCTCTCAAGGGAGGAGAAGAGCCGCGCGCTGCTGCTTGGTAGCCTTGG
AGCGGTCGAATTCTTGGCAGATTTGCTAGTAGGGCGGCATGTGAAGAGCC
AGATTTCTGCGGCTGGTGCGTTGGTTAATATCGTCGGCCCGGACGCGCGA
GGAAGCAAGATTTCTGCGGCTGGTGCGTTGGTTAATATCGTCGGCCCGGA
CGCGCGAGGAAGCAAGCGTGAGTTGCTGCGCAGCGTGCTGACGGACGGGC
TCGTGCTCGGGGTCATCGAGAGCTGTTTGGCGTAACGTGAGTTGCTGCGC
AGCGTGCTGACGGACGGGCTCGTGCTCGGGGTCATCGAGAGCTGTTTGGC
GTAA
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