prot_L-elsbetiae_contig1275.2207.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1275.2207.1
Unique Nameprot_L-elsbetiae_contig1275.2207.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length284
Homology
BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A836CNB1_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNB1_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.080e-15
Identity = 56/136 (41.18%), Postives = 75/136 (55.15%), Query Frame = 0
Query:   18 SPLPLL-LLKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDM-VSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATRDSGIIGVVVRLL 151
            SP+ LL LL+VLK L+RK +NR+A G      +   +S+  L    +CECANVVLN+CY+T NV  F + GG+  L   +R            L P     +    LGALQS+CFD  GR+  R SG + +V  LL
Sbjct:   66 SPVRLLSLLRVLKYLMRKPANRRATGPTCAATVAMLLSNEALSADCACECANVVLNLCYETANVGLFCKHGGMAGL---LR-----------MLSPSCSVALHVAALGALQSLCFDAAGRERARVSGAVDLVAALL 187          
BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7S0SGK9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SGK9_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 8.360e-14
Identity = 57/160 (35.62%), Postives = 82/160 (51.25%), Query Frame = 0
Query:    5 LVALESSSEGARGSPLPLLLLKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATRDSGIIGVVVRLLED--DSPKVRARA 162
            L  L S+ E A    L L  LK LK+L RKQ NR++ GR G+  +   + +     V+ E ANV+LN+CY+  NV   L  GG   L PL+R   E+              ++ A   GA+QS+CF + GR   RD   +  ++RLL +   + KV+ RA
Sbjct:   74 LFTLMSAPECAADEDLALHALKALKILSRKQENRQSFGRRGLNAVLRLLVAPPSSRVAGEGANVILNVCYEKENVDAILMCGG---LEPLVRFLGERTDP-----------DLQANAAGAIQSICFQEKGRARVRDLDGVPAMLRLLGECRGNVKVQTRA 219          
BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: C1EIP6_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EIP6_MICCC)

HSP 1 Score: 79.7 bits (195), Expect = 3.120e-13
Identity = 79/258 (30.62%), Postives = 101/258 (39.15%), Query Frame = 0
Query:   20 LPLLLLKVLKVLLRKQSNRKALGRP----GIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATRDSGIIGVVVRLL----------------EDDSPKVRARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSRALLLGSLGAVEFLADLLV-GRHVKSQISAAGALVNIVGPD 256
            L LL LK LK+L RK+ NR+  GR      ++L  T   ++    V+ E ANVVLN CY+  NV+H LE GGV    PL+R   +           G      +   GA+QSVCF  PGR   RD   +  +V L+                +D+    RAR                                                      SRAL     GAVE L  LL  GR   +Q  AAGAL+N +GPD
Sbjct:   77 LALLALKTLKILSRKEDNRRRFGRELCRAVVRLALTHPRAS--HAVTAEGANVVLNACYEKENVEHVLECGGVQ---PLVRRVADT----------GESWRCRSAAAGAVQSVCFQAPGRCRVRDCDGVAALVALMKELDRREGGTRDSSFTDDERSMCRARVVGALHNVSADDDAIRLVRLSDGVPHLVRALGDVDDVVVNSAAGATQNVSRERASRALFRRH-GAVEALTKLLARGRDPATQARAAGALLNCLGPD 318          
BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7S3XPP0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPP0_HETAK)

HSP 1 Score: 77.4 bits (189), Expect = 5.550e-13
Identity = 53/128 (41.41%), Postives = 69/128 (53.91%), Query Frame = 0
Query:   12 SEGARGSPLPLLLLKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATR 139
            +E  R S L + +LKV KVL+RKQ+NR  +    +  +   +SS    M + E ANVVLNMCYD+ NV  F++ GG  AL PL +S    L+ S                LGALQSV + K GR A R
Sbjct:   61 TEVFRRSDLLVPMLKVAKVLMRKQANRALIQDAHVLSLIPVLSSPKNVMAAREAANVVLNMCYDSQNVSTFVQNGGARALLPLTQSADIHLQGS---------------ALGALQSVSYQKEGRSALR 173          
BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A5B8MZ58_9CHLO (ARM repeat domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MZ58_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 1.990e-12
Identity = 53/145 (36.55%), Postives = 73/145 (50.34%), Query Frame = 0
Query:   25 LKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDMV------SCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGR-DATRDSGIIGVVVRLLEDDSPKVRARA 162
            L  LK+L RKQ NR+A+   G + +     ++C D V      + ECANV+LN CY+  NV  FL  GGV  L   + SE   ++A+                 GALQSV + + GR +     G++  +V LL    PKVRARA
Sbjct:  103 LTCLKILSRKQRNRRAIVLTGFKHL-----ASCADFVRNVPTLAAECANVLLNFCYERQNVGLFLSCGGVKVLETYLESEDRGVQAN---------------AAGALQSVSYHEEGRKELLASEGLLPRIVNLLASQEPKVRARA 227          
BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7S0IGD7_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IGD7_MICPS)

HSP 1 Score: 76.3 bits (186), Expect = 5.140e-12
Identity = 77/260 (29.62%), Postives = 100/260 (38.46%), Query Frame = 0
Query:   20 LPLLLLKVLKVLLRKQSNRKALGRP----GIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATRDSGIIGVVVRLL------------------EDDSPKVRARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSRALLLGSLGAVEFLADLLV-GRHVKSQISAAGALVNIVGPD 256
            L LL LK LK+L RK+ NR+  GR      ++L  T   ++    V+ E ANVVLN CY+  NV++ LE GGV  L   +    E L+               +   GA+QSVCF  PGR   RD   +  +V L+                  +D+    RAR                                                      SRAL     GAVE L  LL  G    +Q  AAGAL+NI+GPD
Sbjct:  104 LALLALKTLKILSRKEDNRRRFGRELCRAVVRLALTHPRAS--HAVTAEGANVVLNACYEKENVEYVLECGGVEPLVRRVADTGETLRCR-------------SAAAGAVQSVCFQAPGRCRVRDCDGVAALVALMKELDRASMPRDGSAGRFTDDERSMCRARVVGALHNVGADDDAIRAIRACDGIPHLVRALGDVDDGVCGSAAGATQNVSRERASRALFRRG-GAVEALTKLLARGCDPATQARAAGALLNILGPD 347          
BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7S0VCG2_9CRYP (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0VCG2_9CRYP)

HSP 1 Score: 73.2 bits (178), Expect = 3.980e-11
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 0
Query:   24 LLKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATRDSGIIGVVVRLLEDDSPKVRARA 162
            L +VLKVL RK  NR AL    ++ +  +M       V+ E ++VVLN+CY+  NV  F++  GV  L   +R   +               ++ A   GALQS+ + + GRD  R+ G + V++  L+  S KVR R+
Sbjct:   92 LFRVLKVLSRKAHNRTALEDGDMKTVVHYMHKPKSSQVASEVSSVVLNLCYEKENVVRFIKCKGVPFLLDFVRDPDD---------------DVAANAAGALQSLSYQEVGRDELRELGTLEVLIPSLKHTSVKVRTRS 215          
BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7S0MWF1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWF1_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 1.070e-8
Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 0
Query:   22 LLLLKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKAS 105
            LLLLKV K+L RKQ NR  LG   I+ +  F+       ++ E ANV+LN CY+  NV   L  GGV AL   + +E ++L+A+
Sbjct:    3 LLLLKVFKILSRKQQNRAKLGEGVIKAVVKFLEKPKTSKIAGEGANVILNACYEKENVDIVLNCGGVKALVGFLTTEDQELQAN 86          
BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7S0PQ95_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PQ95_MICPS)

HSP 1 Score: 61.2 bits (147), Expect = 1.910e-7
Identity = 59/207 (28.50%), Postives = 76/207 (36.71%), Query Frame = 0
Query:   61 VSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATRDSGIIGVVVRLL----------EDDSPKVRARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSRALLLGSLGAVEFLADLLV-GRHVKSQISAAGALVNIVGPD 256
            ++ E ANVVLN CY+  NV++ LE GGV  L   +    E L+               +   GA+QSVCF   GR   RD   +  +V L+          +D+    RAR                                                      SRAL     GAV  L  LL  GR   +Q  AAGAL+NI+GPD
Sbjct:   11 ITAEGANVVLNACYEKENVEYVLECGGVEPLVRRVADTGETLRCR-------------SAAAGAVQSVCFQAAGRCRVRDCDGVAALVALMKELDRLSNVTDDERVMCRARVVGALHNVSADDDAIRLIRACDGVPHLVRLLSDDDDGVCGSAAGATQNVSRERASRALFRRG-GAVHALTKLLARGRDPATQARAAGALLNILGPD 203          
BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Match: A0A7S0UYJ1_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UYJ1_9CHLO)

HSP 1 Score: 62.0 bits (149), Expect = 2.260e-7
Identity = 42/138 (30.43%), Postives = 66/138 (47.83%), Query Frame = 0
Query:    2 RAILVALESSSEGARGSPLPLLLLKVLKVLLRKQSNRKALGRPGIQLITTFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKEQLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATR 139
            +++++++   S     +   LL LK LK+  RKQ NR ++    I  I   +S    D +  E +NV+LN+C++  NVQ  +   GV  L   +  E E L+A+                 GA+QSVCF   GR+  R
Sbjct:   56 QSLMISILDDSVVRNDALFTLLCLKTLKIFSRKQLNRGSITESDILGILAVISPPLNDRIGAEGSNVLLNICHEVKNVQTLIRTPGVQQLISFLTEEDEALQAN---------------AAGAIQSVCFLAEGREHVR 178          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1275.2207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A836CNB1_9STRA1.080e-1541.18Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A7S0SGK9_9CHLO8.360e-1435.63Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
C1EIP6_MICCC3.120e-1330.62Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
A0A7S3XPP0_HETAK5.550e-1341.41Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5B8MZ58_9CHLO1.990e-1236.55ARM repeat domain-containing protein n=1 Tax=Chlor... [more]
A0A7S0IGD7_MICPS5.140e-1229.62Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S0VCG2_9CRYP3.980e-1133.09Hypothetical protein n=2 Tax=Hemiselmis TaxID=7792... [more]
A0A7S0MWF1_9CHLO1.070e-842.86Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A7S0PQ95_MICPS1.910e-728.50Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7S0UYJ1_9CHLO2.260e-730.43Hypothetical protein n=1 Tax=Polytomella parva Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 214..254
e-value: 15.0
score: 11.9
coord: 34..74
e-value: 360.0
score: 1.2
coord: 172..212
e-value: 3.2E-4
score: 30.0
coord: 131..171
e-value: 0.011
score: 24.9
IPR000225ArmadilloPFAMPF00514Armcoord: 132..170
e-value: 3.4E-5
score: 23.7
coord: 178..212
e-value: 3.4E-7
score: 30.1
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 183..225
score: 13.702
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 142..184
score: 10.867
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..279
e-value: 1.3E-30
score: 108.4
NoneNo IPR availablePANTHERPTHR15599RTDR1coord: 117..260
coord: 40..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..283
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 9..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 25..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1275contigL-elsbetiae_contig1275:1987..6719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1275.2207.1mRNA_L-elsbetiae_contig1275.2207.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1275 1631..7400 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1275.2207.1 ID=prot_L-elsbetiae_contig1275.2207.1|Name=mRNA_L-elsbetiae_contig1275.2207.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=284bp
MRAILVALESSSEGARGSPLPLLLLKVLKVLLRKQSNRKALGRPGIQLIT
TFMSSTCLDMVSCECANVVLNMCYDTGNVQHFLEVGGVGALGPLIRSEKE
QLKASKPQLPPGLGSEILAPGLGALQSVCFDKPGRDATRDSGIIGVVVRL
LEDDSPKVRARALGTIHNLSTDARSIGIIREEGGLPRLVRLLRSHEAQVC
GGAAGAIQNLSREEKSRALLLGSLGAVEFLADLLVGRHVKSQISAAGALV
NIVGPDARGSKRELLRSVLTDGLVLGVIESCLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold