mRNA_L-elsbetiae_contig12720.2191.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Match: D8LF40_ECTSI (Putative two-pore calcium channel (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF40_ECTSI) HSP 1 Score: 563 bits (1450), Expect = 3.650e-192 Identity = 285/320 (89.06%), Postives = 299/320 (93.44%), Query Frame = 1 Query: 1 FFNRLQHGMAAMSTKPWYVYLAFRLQISACWMWTIIAASIAHSLLVFLEPRPGRPPEDGWLEPRTLLGLEAAFITVYALDVALKAGYMGLRSYVKKPWQKLMIAIVLLLALDASGAVGVRFARCLRPAILSVRTRSIRRFYEVVTQMLPGFLRVCLPVVFFLLLSASYAAMSFGRAKSDFENPSAAGYAIWILMVCSDNYETLVNDPSTHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQVKQERMKELKGLTLAFATMDQTGTGKLSMVVWERFLLHLKPRTTQQERALYFEIASSFADTLDVLGFMDLRQV 960 F RLQHGMAAMSTKPWY+++AFRLQISA WMWTIIA+S+AHSLLVFLEPRPGRPPEDG L P TLLGLEAAFITVYALDVALKA YMGL+SYVKKPWQKLM+ IVLLLA+DASG VGVRFAR LRPAILSVRTR IRRFY VV+QMLPGFLRVCLPVVFFLLLSASYAA+SFGRAKSDFE+PS AGYAIWILMVC+DNYE LV+D STHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTT QV QERMKELKGL +AFATMD TGTGKLSMVVWERFLLHL PRTTQQERALYFEIASSFAD LDVLGFMDLRQV Sbjct: 107 FAGRLQHGMAAMSTKPWYIFMAFRLQISAYWMWTIIASSVAHSLLVFLEPRPGRPPEDGVLGPGTLLGLEAAFITVYALDVALKASYMGLKSYVKKPWQKLMVVIVLLLAIDASGVVGVRFARALRPAILSVRTRHIRRFYAVVSQMLPGFLRVCLPVVFFLLLSASYAALSFGRAKSDFEDPSTAGYAIWILMVCADNYEALVHDRSTHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTEQVNQERMKELKGLNVAFATMDPTGTGKLSMVVWERFLLHLMPRTTQQERALYFEIASSFADNLDVLGFMDLRQV 426
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Match: A0A6H5KF87_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF87_9PHAE) HSP 1 Score: 546 bits (1406), Expect = 1.150e-179 Identity = 277/323 (85.76%), Postives = 296/323 (91.64%), Query Frame = 1 Query: 1 FFNRLQHGMAAMSTKPWYVYLAFRLQISACWMWTIIAASIAHSLLVFLEPRPGRPPEDGWLEPRTLLGLEAAFITVYALDVALKAGYMGLRSYVKKPWQKLMIAIVLLLALDASGAVGVRFARCLRPAILSVRTRSIRRFYEVVTQMLPGFLRVCLPVVFFLLLSASYAAMSFGRAKSDFENPSAAGYAIWILMVCSDNYETLVNDPSTHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQ----VKQERMKELKGLTLAFATMDQTGTGKLSMVVWERFLLHLKPRTTQQERALYFEIASSFADTLDVLGFMDLRQ 957 F RLQHGMAAMSTKPWY+++AFRLQISA WMWTIIA+S+AHSLLVFLEPRPGRPP+DG L P TLLGLEAAFITVYALDVALKA YMGL+SY KKPWQKLM+ IVLLLA+DASG VGVRFAR LRPAILSVRTR IRRFY VV+QMLPGFLRVCLP+VFFLLLSASYAA+SFGRAKS+FE+PS AGYAIWILMVC+DNYE LV+D STHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTT Q V QERMKELKGL +AFATMD GTGK+SMVVWERFLLHL PRTTQQERALYFEIAS+FAD LDVLGFMDLRQ Sbjct: 107 FAGRLQHGMAAMSTKPWYIFMAFRLQISAYWMWTIIASSVAHSLLVFLEPRPGRPPDDGVLGPGTLLGLEAAFITVYALDVALKASYMGLKSYFKKPWQKLMVVIVLLLAVDASGVVGVRFARALRPAILSVRTRHIRRFYAVVSQMLPGFLRVCLPIVFFLLLSASYAALSFGRAKSEFEDPSTAGYAIWILMVCADNYEALVHDRSTHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTEQARSTVNQERMKELKGLNVAFATMDPMGTGKMSMVVWERFLLHLMPRTTQQERALYFEIASNFADNLDVLGFMDLRQ 429
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Match: A0A7S3M3M3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3M3_9STRA) HSP 1 Score: 135 bits (341), Expect = 7.920e-32 Identity = 77/235 (32.77%), Postives = 125/235 (53.19%), Query Frame = 1 Query: 259 YMGLRSYVKKPWQKLMIAIVLLLALDASGAVGVRFARCLRPAILSVRTRSIRRFYEVVTQMLPGFLRVCLPVVFFLLLSASYAAMSFGRAKSDFENPSAAGYAIWILMVCSDNYETLVNDP-STHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQVKQERMKELKGLTLAFATMDQTGTGKLSMVVWERFLLHLKPRTTQQERALYFEIASSFADTLDVLGFMDLRQV 960 Y G+ Y WQ+L + +L ALD LRP + +R R RRF+EV+ +M+PG +P++FF+++ +A+ F D NP Y + L+ +DN++ ++ D + +Y+ F I VG FLLSL++G TY+ + Q+K+ER+KE++GLT AF+++D G +S + W+ L P + ALYFE+ S + VL F+ +R V Sbjct: 3 YEGIEEYFSHDWQQLYFIVAILSALDLFFFRCTYLTNPLRPVVGVLRARKGRRFFEVLKKMMPGMTHSLVPLLFFIVIVMVLSALMFDGTIQDLANPMFTSYNWFFLIFTNDNFDRILPDEVMMNMSYLLFFFPCIYVGQQFLLSLIIGDTYETYKAFVKKQLKKERLKEMQGLTKAFSSLDDQKHGVISALQWKECLNKYDPSIPDEAVALYFELLSGGNSVIGVLQFLSMRSV 237
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Match: A0A482T0I9_9ARCH (Ion transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0I9_9ARCH) HSP 1 Score: 113 bits (282), Expect = 2.940e-24 Identity = 64/191 (33.51%), Postives = 114/191 (59.69%), Query Frame = 1 Query: 394 VRTRSIRRFYEVVTQMLPGFLRVCLPVVFFLLLSASYAAMSFGRAKSDFENPSAAGYAIWILMVCSDNYETLV-NDPSTHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQVKQERMKELKGLTLAFATMDQTGTGKLSMVVWERFLLHLKPRTTQQERALYFEIASSFA-DTLDVLGFMDLRQV 960 +R R R+F+EV+ +M+PG + +P+VFF+L+ +++SF +F++ + Y L+ +DN++ L+ + +Y+ F I VG FLLSL++G TY+ F + Q+K+E++KE++GLT AFA +D G +S V++ + L P + + ALY+E+ S + ++VL F+ LR+V Sbjct: 5 LRARRGRKFFEVLKKMVPGMMHSLVPIVFFVLIIMGMSSLSFDNLIEEFKSTAYTSYNWLFLIFTNDNFDRLLPGSIMVNMSYLLFFFPAIYVGQRFLLSLIIGDTYETFRSYVKKQLKKEKLKEMQGLTKAFAALDDRKCGVISDFVFKECMTCLHPGMSDEVIALYYELLSGGGVNGVNVLQFLSLRKV 195
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Match: L1J300_GUITC (EF-hand domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J300_GUITC) HSP 1 Score: 110 bits (276), Expect = 2.300e-23 Identity = 97/328 (29.57%), Postives = 150/328 (45.73%), Query Frame = 1 Query: 7 NRLQHGMAAMSTKPWYVYLAFRLQISACWMWTIIAASIAHSLLVFLEPRPGRPPE--DGWLEPRTLLGLEAAFITVYALDVALKAGYMG------LRSYVKKPWQKLMIAIVLLLALDA----SGAVGVRFARCLRPAILSVRTRSIRRFYEVVTQMLPGFLRVCLPVVFFLLLSASYAAMS------FGRAKSDF------ENPSAAGYAIWILMVCS--DNYETLVNDP-STHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQVKQERMKELKGLTLAFATMDQTGTGKLSMVVWERFLLHLKP--RTTQQERALYFEI 903 R HG+ ++ P Y F + WM +I ASI H+ L+ EP P R D L+P ++ LE + V+ D+ K Y G + Y+ K WQ+ + I+ L +D + RFAR R +L+ R R +RR M V L VFFL L A S +GR ++ ++ S+ AI L + S DN++ +V + HP F + IV S FL+S+ LGV +D+++E VK E KE K + AF +D GK+ + + L+HL+P R + + A++ E+ Sbjct: 40 GRASHGLYSLLKGPAYKRALFIIHTHPMWMNVVIWASIIHASLIIWEP-PNRLSSWLDPTLDPIPIIILEVLCMGVFVADIVFKMLYFGDEKVSGWQDYISKEWQRNYMTIIFLFHVDFVLYHTKLCPFRFARPFRLTVLAARHRDVRRLISFFPTMC-----VKLVTVFFLPLLGVLAFFSILCVRIYGRLPAEHSLDLGEDSFSSVMPAIRTLFLLSTIDNFDPVVTEAYKQHPVSFFFFLAFIVFASFFLMSVALGVMFDLYLEDHEKTVKAEAKKEEKSMAKAFQKLDVEEQGKIKWLHFREMLVHLRPKDRNVKHDIAIFKEL 361
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Match: A0A7S0F1K7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F1K7_9CRYP) HSP 1 Score: 95.5 bits (236), Expect = 9.340e-19 Identity = 88/288 (30.56%), Postives = 129/288 (44.79%), Query Frame = 1 Query: 7 NRLQHGMAAMSTKPWYVYLAFRLQISACWMWTIIAASIAHSLLVFLEPRPGRPPE--DGWLEPRTLLGLEAAFITVYALDVALKAGYMG------LRSYVKKPWQKLMIAIVLLLALDA----SGAVGVRFARCLRPAILSVRTRSIRRFYEVVTQMLPGFLRVCLPVVFFLLLSASYAAMS------FGRAKSDF------ENPSAAGYAIWILMVCS--DNYETLVNDP-STHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQVKQERMKELKGLTLAF 789 R HG+ ++ P Y F + WM +I ASI H+ L+ EP P R D L+P ++ LE A + V+ D+ K Y G + Y+ K WQ+ + I+ L +D + RFAR R +L+ R R +RR M V L VFFL L A S +GR + ++ S+ AI L + S DN++ +V + HP F + IV S FL+S+ LGV +D+++E VK E KE K + AF Sbjct: 61 GRASHGLYSLLKGPAYKRALFIIHTHPMWMNVVIWASIIHASLIIWEP-PNRLSSWLDPTLDPLPVILLEVACMGVFVADIVFKMLYFGDEKVSGWQDYISKEWQRNYMTIIFLFQVDFVLYHAKICPFRFARPFRLTVLAARHRDVRRLISFFPTMC-----VKLVTVFFLPLLGVLAFFSILCVRIYGRLPQEHSLDLGEDSFSSVLPAIRTLFLLSTIDNFDPVVTEAYKQHPISFFFFLAFIVFASFFLMSVALGVMFDLYLEDHEKTVKAEAKKEEKSVAKAF 342 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12720.2191.1 >prot_L-elsbetiae_contig12720.2191.1 ID=prot_L-elsbetiae_contig12720.2191.1|Name=mRNA_L-elsbetiae_contig12720.2191.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp MAAMSTKPWYVYLAFRLQISACWMWTIIAASIAHSLLVFLEPRPGRPPEDback to top mRNA from alignment at L-elsbetiae_contig12720:762..5197+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12720.2191.1 ID=mRNA_L-elsbetiae_contig12720.2191.1|Name=mRNA_L-elsbetiae_contig12720.2191.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4436bp|location=Sequence derived from alignment at L-elsbetiae_contig12720:762..5197+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12720:762..5197+ >mRNA_L-elsbetiae_contig12720.2191.1 ID=mRNA_L-elsbetiae_contig12720.2191.1|Name=mRNA_L-elsbetiae_contig12720.2191.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1872bp|location=Sequence derived from alignment at L-elsbetiae_contig12720:762..5197+ (Laminarionema elsbetiae ELsaHSoW15)back to top |