prot_L-elsbetiae_contig12720.2191.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12720.2191.1
Unique Nameprot_L-elsbetiae_contig12720.2191.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length312
Homology
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Match: D8LF40_ECTSI (Putative two-pore calcium channel (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF40_ECTSI)

HSP 1 Score: 550 bits (1416), Expect = 3.450e-187
Identity = 279/312 (89.42%), Postives = 293/312 (93.91%), Query Frame = 0
Query:    1 MAAMSTKPWYVYLAFRLQISACWMWTIIAASIAHSLLVFLEPRPGRPPEDGWLEPRTLLGLEAAFITVYALDVALKAGYMGLRSYVKKPWQKLMIAIVLLLALDASGAVGVRFARCLRPAILSVRTRSIRRFYEVVTQMLPGFLRVCLPVVFFLLLSASYAAMSFGRAKSDFENPSAAGYAIWILMVCSDNYETLVNDPSTHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQVKQERMKELKGLTLAFATMDQTGTGKLSMVVWERFLLHLKPRTTQQERALYFEIASSFADTLDVLGFMDLRQV 312
            MAAMSTKPWY+++AFRLQISA WMWTIIA+S+AHSLLVFLEPRPGRPPEDG L P TLLGLEAAFITVYALDVALKA YMGL+SYVKKPWQKLM+ IVLLLA+DASG VGVRFAR LRPAILSVRTR IRRFY VV+QMLPGFLRVCLPVVFFLLLSASYAA+SFGRAKSDFE+PS AGYAIWILMVC+DNYE LV+D STHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTT QV QERMKELKGL +AFATMD TGTGKLSMVVWERFLLHL PRTTQQERALYFEIASSFAD LDVLGFMDLRQV
Sbjct:  115 MAAMSTKPWYIFMAFRLQISAYWMWTIIASSVAHSLLVFLEPRPGRPPEDGVLGPGTLLGLEAAFITVYALDVALKASYMGLKSYVKKPWQKLMVVIVLLLAIDASGVVGVRFARALRPAILSVRTRHIRRFYAVVSQMLPGFLRVCLPVVFFLLLSASYAALSFGRAKSDFEDPSTAGYAIWILMVCADNYEALVHDRSTHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTEQVNQERMKELKGLNVAFATMDPTGTGKLSMVVWERFLLHLMPRTTQQERALYFEIASSFADNLDVLGFMDLRQV 426          
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Match: A0A6H5KF87_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF87_9PHAE)

HSP 1 Score: 533 bits (1372), Expect = 8.060e-175
Identity = 271/315 (86.03%), Postives = 290/315 (92.06%), Query Frame = 0
Query:    1 MAAMSTKPWYVYLAFRLQISACWMWTIIAASIAHSLLVFLEPRPGRPPEDGWLEPRTLLGLEAAFITVYALDVALKAGYMGLRSYVKKPWQKLMIAIVLLLALDASGAVGVRFARCLRPAILSVRTRSIRRFYEVVTQMLPGFLRVCLPVVFFLLLSASYAAMSFGRAKSDFENPSAAGYAIWILMVCSDNYETLVNDPSTHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQ----VKQERMKELKGLTLAFATMDQTGTGKLSMVVWERFLLHLKPRTTQQERALYFEIASSFADTLDVLGFMDLRQ 311
            MAAMSTKPWY+++AFRLQISA WMWTIIA+S+AHSLLVFLEPRPGRPP+DG L P TLLGLEAAFITVYALDVALKA YMGL+SY KKPWQKLM+ IVLLLA+DASG VGVRFAR LRPAILSVRTR IRRFY VV+QMLPGFLRVCLP+VFFLLLSASYAA+SFGRAKS+FE+PS AGYAIWILMVC+DNYE LV+D STHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTT Q    V QERMKELKGL +AFATMD  GTGK+SMVVWERFLLHL PRTTQQERALYFEIAS+FAD LDVLGFMDLRQ
Sbjct:  115 MAAMSTKPWYIFMAFRLQISAYWMWTIIASSVAHSLLVFLEPRPGRPPDDGVLGPGTLLGLEAAFITVYALDVALKASYMGLKSYFKKPWQKLMVVIVLLLAVDASGVVGVRFARALRPAILSVRTRHIRRFYAVVSQMLPGFLRVCLPIVFFLLLSASYAALSFGRAKSEFEDPSTAGYAIWILMVCADNYEALVHDRSTHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTEQARSTVNQERMKELKGLNVAFATMDPMGTGKMSMVVWERFLLHLMPRTTQQERALYFEIASNFADNLDVLGFMDLRQ 429          
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Match: A0A7S3M3M3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3M3_9STRA)

HSP 1 Score: 135 bits (341), Expect = 6.430e-32
Identity = 77/235 (32.77%), Postives = 125/235 (53.19%), Query Frame = 0
Query:   79 YMGLRSYVKKPWQKLMIAIVLLLALDASGAVGVRFARCLRPAILSVRTRSIRRFYEVVTQMLPGFLRVCLPVVFFLLLSASYAAMSFGRAKSDFENPSAAGYAIWILMVCSDNYETLVNDP-STHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQVKQERMKELKGLTLAFATMDQTGTGKLSMVVWERFLLHLKPRTTQQERALYFEIASSFADTLDVLGFMDLRQV 312
            Y G+  Y    WQ+L   + +L ALD            LRP +  +R R  RRF+EV+ +M+PG     +P++FF+++    +A+ F     D  NP    Y  + L+  +DN++ ++ D    + +Y+ F    I VG  FLLSL++G TY+ +      Q+K+ER+KE++GLT AF+++D    G +S + W+  L    P    +  ALYFE+ S     + VL F+ +R V
Sbjct:    3 YEGIEEYFSHDWQQLYFIVAILSALDLFFFRCTYLTNPLRPVVGVLRARKGRRFFEVLKKMMPGMTHSLVPLLFFIVIVMVLSALMFDGTIQDLANPMFTSYNWFFLIFTNDNFDRILPDEVMMNMSYLLFFFPCIYVGQQFLLSLIIGDTYETYKAFVKKQLKKERLKEMQGLTKAFSSLDDQKHGVISALQWKECLNKYDPSIPDEAVALYFELLSGGNSVIGVLQFLSMRSV 237          
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Match: A0A482T0I9_9ARCH (Ion transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0I9_9ARCH)

HSP 1 Score: 113 bits (282), Expect = 2.460e-24
Identity = 64/191 (33.51%), Postives = 114/191 (59.69%), Query Frame = 0
Query:  124 VRTRSIRRFYEVVTQMLPGFLRVCLPVVFFLLLSASYAAMSFGRAKSDFENPSAAGYAIWILMVCSDNYETLV-NDPSTHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQVKQERMKELKGLTLAFATMDQTGTGKLSMVVWERFLLHLKPRTTQQERALYFEIASSFA-DTLDVLGFMDLRQV 312
            +R R  R+F+EV+ +M+PG +   +P+VFF+L+    +++SF     +F++ +   Y    L+  +DN++ L+      + +Y+ F    I VG  FLLSL++G TY+ F  +   Q+K+E++KE++GLT AFA +D    G +S  V++  +  L P  + +  ALY+E+ S    + ++VL F+ LR+V
Sbjct:    5 LRARRGRKFFEVLKKMVPGMMHSLVPIVFFVLIIMGMSSLSFDNLIEEFKSTAYTSYNWLFLIFTNDNFDRLLPGSIMVNMSYLLFFFPAIYVGQRFLLSLIIGDTYETFRSYVKKQLKKEKLKEMQGLTKAFAALDDRKCGVISDFVFKECMTCLHPGMSDEVIALYYELLSGGGVNGVNVLQFLSLRKV 195          
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Match: L1J300_GUITC (EF-hand domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J300_GUITC)

HSP 1 Score: 103 bits (256), Expect = 8.370e-21
Identity = 94/315 (29.84%), Postives = 144/315 (45.71%), Query Frame = 0
Query:    8 PWYVYLAFRLQISACWMWTIIAASIAHSLLVFLEPRPGRPPE--DGWLEPRTLLGLEAAFITVYALDVALKAGYMG------LRSYVKKPWQKLMIAIVLLLALDA----SGAVGVRFARCLRPAILSVRTRSIRRFYEVVTQMLPGFLRVCLPVVFFLLLSASYAAMS------FGRAKSDF------ENPSAAGYAIWILMVCS--DNYETLVNDP-STHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQVKQERMKELKGLTLAFATMDQTGTGKLSMVVWERFLLHLKP--RTTQQERALYFEI 293
            P Y    F +     WM  +I ASI H+ L+  EP P R     D  L+P  ++ LE   + V+  D+  K  Y G       + Y+ K WQ+  + I+ L  +D     +     RFAR  R  +L+ R R +RR       M      V L  VFFL L    A  S      +GR  ++       ++ S+   AI  L + S  DN++ +V +    HP    F +  IV  S FL+S+ LGV +D+++E     VK E  KE K +  AF  +D    GK+  + +   L+HL+P  R  + + A++ E+
Sbjct:   53 PAYKRALFIIHTHPMWMNVVIWASIIHASLIIWEP-PNRLSSWLDPTLDPIPIIILEVLCMGVFVADIVFKMLYFGDEKVSGWQDYISKEWQRNYMTIIFLFHVDFVLYHTKLCPFRFARPFRLTVLAARHRDVRRLISFFPTMC-----VKLVTVFFLPLLGVLAFFSILCVRIYGRLPAEHSLDLGEDSFSSVMPAIRTLFLLSTIDNFDPVVTEAYKQHPVSFFFFLAFIVFASFFLMSVALGVMFDLYLEDHEKTVKAEAKKEEKSMAKAFQKLDVEEQGKIKWLHFREMLVHLRPKDRNVKHDIAIFKEL 361          
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Match: A0A7S0F1K7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F1K7_9CRYP)

HSP 1 Score: 87.8 bits (216), Expect = 4.500e-16
Identity = 85/275 (30.91%), Postives = 123/275 (44.73%), Query Frame = 0
Query:    8 PWYVYLAFRLQISACWMWTIIAASIAHSLLVFLEPRPGRPPE--DGWLEPRTLLGLEAAFITVYALDVALKAGYMG------LRSYVKKPWQKLMIAIVLLLALDA----SGAVGVRFARCLRPAILSVRTRSIRRFYEVVTQMLPGFLRVCLPVVFFLLLSASYAAMS------FGRAKSDF------ENPSAAGYAIWILMVCS--DNYETLVNDP-STHPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQVKQERMKELKGLTLAF 255
            P Y    F +     WM  +I ASI H+ L+  EP P R     D  L+P  ++ LE A + V+  D+  K  Y G       + Y+ K WQ+  + I+ L  +D     +     RFAR  R  +L+ R R +RR       M      V L  VFFL L    A  S      +GR   +       ++ S+   AI  L + S  DN++ +V +    HP    F +  IV  S FL+S+ LGV +D+++E     VK E  KE K +  AF
Sbjct:   74 PAYKRALFIIHTHPMWMNVVIWASIIHASLIIWEP-PNRLSSWLDPTLDPLPVILLEVACMGVFVADIVFKMLYFGDEKVSGWQDYISKEWQRNYMTIIFLFQVDFVLYHAKICPFRFARPFRLTVLAARHRDVRRLISFFPTMC-----VKLVTVFFLPLLGVLAFFSILCVRIYGRLPQEHSLDLGEDSFSSVLPAIRTLFLLSTIDNFDPVVTEAYKQHPISFFFFLAFIVFASFFLMSVALGVMFDLYLEDHEKTVKAEAKKEEKSVAKAF 342          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12720.2191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LF40_ECTSI3.450e-18789.42Putative two-pore calcium channel (Partial) (Fragm... [more]
A0A6H5KF87_9PHAE8.060e-17586.03Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S3M3M3_9STRA6.430e-3232.77Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482T0I9_9ARCH2.460e-2433.51Ion transporter n=1 Tax=archaeon TaxID=1906665 Rep... [more]
L1J300_GUITC8.370e-2129.84EF-hand domain-containing protein n=1 Tax=Guillard... [more]
A0A7S0F1K7_9CRYP4.500e-1630.91Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 21..234
e-value: 3.8E-18
score: 65.6
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 15..124
e-value: 1.2E-5
score: 27.5
NoneNo IPR availablePANTHERPTHR46726FAMILY NOT NAMEDcoord: 13..294
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..163
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 233..312
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 193..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 115..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..232
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 164..174
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 21..233
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 21..40
NoneNo IPR availableTMHMMTMhelixcoord: 205..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12720contigL-elsbetiae_contig12720:786..5197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12720.2191.1mRNA_L-elsbetiae_contig12720.2191.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12720 762..5197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12720.2191.1 ID=prot_L-elsbetiae_contig12720.2191.1|Name=mRNA_L-elsbetiae_contig12720.2191.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp
MAAMSTKPWYVYLAFRLQISACWMWTIIAASIAHSLLVFLEPRPGRPPED
GWLEPRTLLGLEAAFITVYALDVALKAGYMGLRSYVKKPWQKLMIAIVLL
LALDASGAVGVRFARCLRPAILSVRTRSIRRFYEVVTQMLPGFLRVCLPV
VFFLLLSASYAAMSFGRAKSDFENPSAAGYAIWILMVCSDNYETLVNDPS
THPAYVPFIVMVIVVGSMFLLSLLLGVTYDVFIEHTTAQVKQERMKELKG
LTLAFATMDQTGTGKLSMVVWERFLLHLKPRTTQQERALYFEIASSFADT
LDVLGFMDLRQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
IPR027359Volt_channel_dom_sf