mRNA_L-elsbetiae_contig1270.2167.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1270.2167.1
Unique NamemRNA_L-elsbetiae_contig1270.2167.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1270.2167.1 vs. uniprot
Match: A0A6H5L6K7_9PHAE (TFIIB-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6K7_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 8.030e-87
Identity = 448/805 (55.65%), Postives = 471/805 (58.51%), Query Frame = 1 
Query:    1 LTLNQIIGSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKLPQTVAFPGVEDDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSVLVSDVRMDPPAFIANRIRDGRLKMPWTEPTPPESCGAKAGRRKGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRVLPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGHSKATQXXXXXXXXEGEXXXXXXXXXXXXXXGEQGEGVRLSSKMKVDANTDEGREALTRHVLHINIRSSHNVDSKARSRAKRSKVESKVYSCLESMFDEDEAKGLVVDPADGGSTPHSKTSSTANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------YTHSSKANVGGTFQDKVFSEAARSKSLKIDHAALQRIMNVDGSLKQVDEDDDAMEEVFEDNLAPPPASXXXXXKNGKGYGGRGKSPLTPSLSSSXXSSTPAMVKPFAGSAVLPPARRGNTAGAXXXXXXXXXXAKGEATAAPVRRGGPKSHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGEKAIKDALALLAMGG 2358
            +T  +IIGSMKRDFLASGRQPAG+CCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKLPQTVAFPGVED +A  XXXXXXXXXXXXXXX                               SVLVSD+RMDPPAFIANRIRDG LKMPWTE T  E+ GAK                                                           XXXXXXXXXXXXXXXXXXXXXXXXXXX        R+  PK       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXX   XXXXXXXXXXXXXX       RLSSKMKVDANT+EGREALTRHVLHI  R++    SKA+SRAKRSKVES+VYSCLE+MFDEDE +GL +D   GG            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                XXXXXXXXXXXXXXXXXXXX                                                          YT S    VG  F + +  EAA+SKSLKIDHAALQR+MN+DGSLKQV+E DD MEEVFEDNLAPP  S     KN KG  GRGKSPLT SLSSS   STPAM+KPF G AVLPPARRGNT              K        R GG +                               DGGEKAIKDALALL  GG
Sbjct:  227 MTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKLPQTVAFPGVEDASAAAXXXXXXXXXXXXXXXTAEK---------------------------SVLVSDIRMDPPAFIANRIRDGALKMPWTEQTVTETAGAKX----------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXRGVRPGVKRKRSPKDKAPRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARLSSKMKVDANTEEGREALTRHVLHI--RATKRGASKAKSRAKRSKVESEVYSCLENMFDEDEERGLSIDR--GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKAKSPAPPASDETLKIRDGGAAGEDSGNKDQXXXXXXXXXXXXXXXXXXXXDGLEWGVYLRTEEDSDRTKKEWEKEHKDWVEDQTEKSRILSDETGLNPPGGVPKKKRKYTFSGSHAVGKNFGEAISLEAAKSKSLKIDHAALQRVMNLDGSLKQVNEGDDVMEEVFEDNLAPPVPS-----KNSKGIRGRGKSPLTASLSSS---STPAMLKPFTGGAVLPPARRGNTTATAACSDVGP---KAXXXXXXXRGGGKR----------VAPIAQPAAVVKAPWARAGPNDGGEKAIKDALALLKSGG 921
[Close]
BLAST of mRNA_L-elsbetiae_contig1270.2167.1 vs. uniprot
Match: A0A3Q1FK05_9TELE (TFIIB domain-containing protein n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1FK05_9TELE)

HSP 1 Score: 85.1 bits (209), Expect = 1.020e-15
Identity = 42/79 (53.16%), Postives = 61/79 (77.22%), Query Frame = 1 
Query:    1 LTLNQIIGSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 237
            +T  +++  MKRD++ +GR+PAG+C AAL +A R++   R+ +EI   VKVC+AT+RKRL+EFE TPTSQLT+EE  K+
Sbjct:    1 MTAMRLVQRMKRDWMHTGRRPAGLCGAALLVAARLHDFRRTIKEIISIVKVCEATLRKRLVEFEDTPTSQLTIEEFMKV 79
[Close]
BLAST of mRNA_L-elsbetiae_contig1270.2167.1 vs. uniprot
Match: A0A3P8RXA0_AMPPE (TFIIB domain-containing protein n=1 Tax=Amphiprion percula TaxID=161767 RepID=A0A3P8RXA0_AMPPE)

HSP 1 Score: 82.4 bits (202), Expect = 6.410e-15
Identity = 40/79 (50.63%), Postives = 60/79 (75.95%), Query Frame = 1 
Query:    1 LTLNQIIGSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 237
            +T  +++  MKRD++ +GR+P+G+C AAL +A R++   R+ +EI   VKVC+ T+RKRL+EFE TPTSQLT+EE  K+
Sbjct:    1 MTAMRLVQRMKRDWMHTGRRPSGLCGAALLVAARLHDFRRTIKEIVSIVKVCETTLRKRLVEFEDTPTSQLTIEEFMKV 79
[Close]
BLAST of mRNA_L-elsbetiae_contig1270.2167.1 vs. uniprot
Match: A0A3Q3E5F3_9LABR (TFIIB domain-containing protein n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3E5F3_9LABR)

HSP 1 Score: 82.0 bits (201), Expect = 7.210e-15
Identity = 40/79 (50.63%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:    1 LTLNQIIGSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 237
            +T  +++  MKRD++ +GR+P+G+C AAL +A R++   R+ +EI   VKVC+ T+RKRL EFE TPTSQLT+EE  K+
Sbjct:    1 MTAMRLVQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTIKEIVGVVKVCETTLRKRLTEFEGTPTSQLTIEEFMKV 79
[Close]
BLAST of mRNA_L-elsbetiae_contig1270.2167.1 vs. uniprot
Match: A0A6I9PXS7_9TELE (transcription factor IIIB 90 kDa subunit-like n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9PXS7_9TELE)

HSP 1 Score: 83.2 bits (204), Expect = 1.020e-14
Identity = 40/79 (50.63%), Postives = 61/79 (77.22%), Query Frame = 1 
Query:    1 LTLNQIIGSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 237
            +T  +++  MKRD++ +GR+P+G+C AAL +A R++   R+ +EI   VKVC++T+RKRL+EFE TPTSQLT+EE  K+
Sbjct:    1 MTAMRLVQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTIKEIVGVVKVCESTLRKRLIEFEDTPTSQLTIEEFMKM 79
[Close]
BLAST of mRNA_L-elsbetiae_contig1270.2167.1 vs. uniprot
Match: A0A8C1EH18_CYPCA (TFIIB domain-containing protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1EH18_CYPCA)

HSP 1 Score: 82.0 bits (201), Expect = 1.090e-14
Identity = 39/79 (49.37%), Postives = 61/79 (77.22%), Query Frame = 1 
Query:    1 LTLNQIIGSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 237
            +T  +++  MKRD++ +GR+PAG+C AAL +A R++   R+ +E+ + VKVC+AT+RKRL EFE TPTS+LT+EE  ++
Sbjct:    1 MTALRLLQRMKRDWMHTGRRPAGLCGAALLVAARMHEFRRTIKEVIRVVKVCEATLRKRLNEFEDTPTSELTIEEFMRV 79
[Close]
BLAST of mRNA_L-elsbetiae_contig1270.2167.1 vs. uniprot
Match: A0A668S162_OREAU (TFIIB domain-containing protein n=1 Tax=Oreochromis aureus TaxID=47969 RepID=A0A668S162_OREAU)

HSP 1 Score: 82.0 bits (201), Expect = 1.380e-14
Identity = 40/79 (50.63%), Postives = 60/79 (75.95%), Query Frame = 1 
Query:    1 LTLNQIIGSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 237
            +T  +++  MKRD++ +GR+P+G+C AAL +A R++   R+ +EI   VKVC++T+RKRL EFE TPTSQLT+EE  K+
Sbjct:    1 MTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARLHDFRRTVKEIVNIVKVCESTLRKRLTEFEDTPTSQLTIEEFMKV 79
[Close]
BLAST of mRNA_L-elsbetiae_contig1270.2167.1 vs. uniprot
Match: A0A8C0IRG5_CHEAB (TFIIB domain-containing protein n=1 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0IRG5_CHEAB)

HSP 1 Score: 82.8 bits (203), Expect = 1.380e-14
Identity = 39/79 (49.37%), Postives = 61/79 (77.22%), Query Frame = 1 
Query:    1 LTLNQIIGSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 237
            +T  +++  MKRD++ +GR+P+G+C AAL +A R++   R+ +E+ + VKVC++T+RKRL EFE TPTSQLT+EE  K+
Sbjct:    1 MTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIEEFMKI 79
[Close]
BLAST of mRNA_L-elsbetiae_contig1270.2167.1 vs. uniprot
Match: A0A8C1EGR3_CYPCA (TFIIB domain-containing protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1EGR3_CYPCA)

HSP 1 Score: 82.0 bits (201), Expect = 1.890e-14
Identity = 39/79 (49.37%), Postives = 61/79 (77.22%), Query Frame = 1 
Query:    1 LTLNQIIGSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 237
            +T  +++  MKRD++ +GR+PAG+C AAL +A R++   R+ +E+ + VKVC+AT+RKRL EFE TPTS+LT+EE  ++
Sbjct:    1 MTALRLLQRMKRDWMHTGRRPAGLCGAALLVAARMHEFRRTIKEVIRVVKVCEATLRKRLNEFEDTPTSELTIEEFMRV 79
[Close]
BLAST of mRNA_L-elsbetiae_contig1270.2167.1 vs. uniprot
Match: A0A452VKK3_URSMA (BRF1 RNA polymerase III transcription initiation factor subunit n=1 Tax=Ursus maritimus TaxID=29073 RepID=A0A452VKK3_URSMA)

HSP 1 Score: 82.4 bits (202), Expect = 2.080e-14
Identity = 39/79 (49.37%), Postives = 61/79 (77.22%), Query Frame = 1 
Query:    1 LTLNQIIGSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 237
            +T  +++  MKRD++ +GR+P+G+C AAL +A R++   R+ +E+   VKVC++T+RKRL+EFE TPTSQLTV+E  K+
Sbjct:    1 MTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLRKRLMEFEDTPTSQLTVDEFMKI 79
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1270.2167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6K7_9PHAE8.030e-8755.65TFIIB-type domain-containing protein n=2 Tax=Ectoc... [more]
A0A3Q1FK05_9TELE1.020e-1553.16TFIIB domain-containing protein n=1 Tax=Acanthochr... [more]
A0A3P8RXA0_AMPPE6.410e-1550.63TFIIB domain-containing protein n=1 Tax=Amphiprion... [more]
A0A3Q3E5F3_9LABR7.210e-1550.63TFIIB domain-containing protein n=1 Tax=Labrus ber... [more]
A0A6I9PXS7_9TELE1.020e-1450.63transcription factor IIIB 90 kDa subunit-like n=1 ... [more]
A0A8C1EH18_CYPCA1.090e-1449.37TFIIB domain-containing protein n=1 Tax=Cyprinus c... [more]
A0A668S162_OREAU1.380e-1450.63TFIIB domain-containing protein n=1 Tax=Oreochromi... [more]
A0A8C0IRG5_CHEAB1.380e-1449.37TFIIB domain-containing protein n=1 Tax=Chelonoidi... [more]
A0A8C1EGR3_CYPCA1.890e-1449.37TFIIB domain-containing protein n=1 Tax=Cyprinus c... [more]
A0A452VKK3_URSMA2.080e-1449.37BRF1 RNA polymerase III transcription initiation f... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1270contigL-elsbetiae_contig1270:842..11634 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.4
Seed ortholog evalue1.2e-62
Seed eggNOG ortholog2880.D8LS89
Preferred nameBRF1
KEGG koko:K15196
Hectar predicted targeting categoryother localisation
GOsGO:0000126,GO:0000976,GO:0000992,GO:0000994,GO:0000995,GO:0001006,GO:0001016,GO:0001025,GO:0001032,GO:0001067,GO:0001112,GO:0001120,GO:0001156,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0006139,GO:0006259,GO:0006351,GO:0006352,GO:0006355,GO:0006359,GO:0006383,GO:0006384,GO:0006399,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009303,GO:0009304,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015074,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031974,GO:0031981,GO:0032091,GO:0032196,GO:0032774,GO:0032991,GO:0034367,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043487,GO:0043488,GO:0043496,GO:0043565,GO:0043933,GO:0044085,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044798,GO:0045893,GO:0045935,GO:0045945,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051098,GO:0051100,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0061013,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070063,GO:0070893,GO:0070897,GO:0070898,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090074,GO:0090304,GO:0090576,GO:0097159,GO:0097659,GO:0098781,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903311,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141
EggNOG free text desc.DNA-templated transcriptional preinitiation complex assembly
EggNOG OGsCOG1405@1,KOG1598@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021
Exons12
Model size2715
Cds size2688
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815458.547047-UTR-L-elsbetiae_contig1270:841..8681622815458.547047-UTR-L-elsbetiae_contig1270:841..868Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1270 842..868 +
1691682907.8809237-UTR-L-elsbetiae_contig1270:841..8681691682907.8809237-UTR-L-elsbetiae_contig1270:841..868Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1270 842..868 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815458.565589-CDS-L-elsbetiae_contig1270:868..9821622815458.565589-CDS-L-elsbetiae_contig1270:868..982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 869..982 +
1691682907.8921566-CDS-L-elsbetiae_contig1270:868..9821691682907.8921566-CDS-L-elsbetiae_contig1270:868..982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 869..982 +
1622815458.5781581-CDS-L-elsbetiae_contig1270:1496..18311622815458.5781581-CDS-L-elsbetiae_contig1270:1496..1831Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 1497..1831 +
1691682907.9105482-CDS-L-elsbetiae_contig1270:1496..18311691682907.9105482-CDS-L-elsbetiae_contig1270:1496..1831Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 1497..1831 +
1622815458.5921016-CDS-L-elsbetiae_contig1270:2653..32181622815458.5921016-CDS-L-elsbetiae_contig1270:2653..3218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 2654..3218 +
1691682907.9219987-CDS-L-elsbetiae_contig1270:2653..32181691682907.9219987-CDS-L-elsbetiae_contig1270:2653..3218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 2654..3218 +
1622815458.6223023-CDS-L-elsbetiae_contig1270:3292..33251622815458.6223023-CDS-L-elsbetiae_contig1270:3292..3325Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 3293..3325 +
1691682907.9299097-CDS-L-elsbetiae_contig1270:3292..33251691682907.9299097-CDS-L-elsbetiae_contig1270:3292..3325Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 3293..3325 +
1622815458.9209163-CDS-L-elsbetiae_contig1270:3338..34611622815458.9209163-CDS-L-elsbetiae_contig1270:3338..3461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 3339..3461 +
1691682907.9380815-CDS-L-elsbetiae_contig1270:3338..34611691682907.9380815-CDS-L-elsbetiae_contig1270:3338..3461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 3339..3461 +
1622815458.937961-CDS-L-elsbetiae_contig1270:4091..41721622815458.937961-CDS-L-elsbetiae_contig1270:4091..4172Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 4092..4172 +
1691682907.9460964-CDS-L-elsbetiae_contig1270:4091..41721691682907.9460964-CDS-L-elsbetiae_contig1270:4091..4172Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 4092..4172 +
1622815458.951663-CDS-L-elsbetiae_contig1270:5327..56211622815458.951663-CDS-L-elsbetiae_contig1270:5327..5621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 5328..5621 +
1691682907.954292-CDS-L-elsbetiae_contig1270:5327..56211691682907.954292-CDS-L-elsbetiae_contig1270:5327..5621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 5328..5621 +
1622815459.0313437-CDS-L-elsbetiae_contig1270:6786..69211622815459.0313437-CDS-L-elsbetiae_contig1270:6786..6921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 6787..6921 +
1691682907.9628537-CDS-L-elsbetiae_contig1270:6786..69211691682907.9628537-CDS-L-elsbetiae_contig1270:6786..6921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 6787..6921 +
1622815459.0411265-CDS-L-elsbetiae_contig1270:7599..76671622815459.0411265-CDS-L-elsbetiae_contig1270:7599..7667Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 7600..7667 +
1691682907.9711711-CDS-L-elsbetiae_contig1270:7599..76671691682907.9711711-CDS-L-elsbetiae_contig1270:7599..7667Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 7600..7667 +
1622815459.050424-CDS-L-elsbetiae_contig1270:9916..100501622815459.050424-CDS-L-elsbetiae_contig1270:9916..10050Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 9917..10050 +
1691682907.9792593-CDS-L-elsbetiae_contig1270:9916..100501691682907.9792593-CDS-L-elsbetiae_contig1270:9916..10050Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 9917..10050 +
1622815459.0593376-CDS-L-elsbetiae_contig1270:10792..111451622815459.0593376-CDS-L-elsbetiae_contig1270:10792..11145Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 10793..11145 +
1691682907.986953-CDS-L-elsbetiae_contig1270:10792..111451691682907.986953-CDS-L-elsbetiae_contig1270:10792..11145Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 10793..11145 +
1622815459.0732358-CDS-L-elsbetiae_contig1270:11181..116341622815459.0732358-CDS-L-elsbetiae_contig1270:11181..11634Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 11182..11634 +
1691682907.9969876-CDS-L-elsbetiae_contig1270:11181..116341691682907.9969876-CDS-L-elsbetiae_contig1270:11181..11634Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1270 11182..11634 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1270.2167.1prot_L-elsbetiae_contig1270.2167.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1270 869..11634 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1270.2167.1

>prot_L-elsbetiae_contig1270.2167.1 ID=prot_L-elsbetiae_contig1270.2167.1|Name=mRNA_L-elsbetiae_contig1270.2167.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=896bp
MKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKR
LLEFEATPTSQLTVEELNKLPQTVAFPGVEDDAAAAAAASRAPAGDGGGD
AAADGSGQPASGAAGNGVGGAAAAAAAAAAGVSVLVSDVRMDPPAFIANR
IRDGRLKMPWTEPTPPESCGAKAGRRKGAKKAAGGGAASAGSVRPRGGTR
KHGDGGDKGGRGGGASAKKMSPPKRRGGTSREDDDSSSGSSSGGGSGSDD
DDDDEEEDEEEEGIAGRRVLPKRKAAAAAAAAVSKSSKASGDDETETDDG
DEDDEGGSGDEDDDSEYSSGEEEERDSDDDGPGHSKATQEAEEEEEEEGE
EEDEDGEEEEEDAEGEQGEGVRLSSKMKVDANTDEGREALTRHVLHINIR
SSHNVDSKARSRAKRSKVESKVYSCLESMFDEDEAKGLVVDPADGGSTPH
SKTSSTANTNAEGDGDGDSDGGTGSEKRPAAAAAAAGQGKRAANGHGRDR
GQAPTPAASDTDKDKGTGKDNGGGADDAEWGWGMYLRTEEDSDRTKKEWE
KEHQGWEDEQESKHNLQAETEAKNKKKRKYTHSSKANVGGTFQDKVFSEA
ARSKSLKIDHAALQRIMNVDGSLKQVDEDDDAMEEVFEDNLAPPPASSSS
SSKNGKGYGGRGKSPLTPSLSSSSSSSTPAMVKPFAGSAVLPPARRGNTA
GAGAGAGAAGVGAKGEATAAPVRRGGPKSHGGRGAGKGHQAAGGPAPVVK
APWARAGPDDGGEKAIKDALALLAMGGGLVDPPAASPASPALPGFSGVAG
ASAGATKAVPTAGGNSPAAVAAPAPAAPEVVETAGETNGAEEEGQEGGEA
GAEAVAGAAGAAAGEDDEEDDDEEDDEDALYGEIDDFDDPYGEEA*
back to top

mRNA from alignment at L-elsbetiae_contig1270:842..11634+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1270.2167.1 ID=mRNA_L-elsbetiae_contig1270.2167.1|Name=mRNA_L-elsbetiae_contig1270.2167.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10793bp|location=Sequence derived from alignment at L-elsbetiae_contig1270:842..11634+ (Laminarionema elsbetiae ELsaHSoW15)
CTCACCCTAAATCAGATCATCGGGTCCATGAAGAGGGATTTCTTGGCGTC
GGGGCGTCAGCCGGCCGGCGTTTGCTGCGCTGCCCTCACCCTGGCGACGC
GCGTCAACCGCATCGAGAGGTCCAAGGAAGAGATCCGCAAGGTGTTTCCC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGTGTGCATTTTG
GTGCATGTGTGCACAGCTGGGTGTATTGTATCTTGTTGGGACTCACGCTG
ACGATTGTCACGAGAGCGGCTGTTTGCACGGCCGTCAGAACGTGGACGCT
AGTGTGTGTATTTGCCGGTTCGGCCGTAGGAAGGCCAGAGAACCATCCCT
AGATTTTCGTAGAGCGGGCGGCCTGTGTCGTGTCCAAGACCCACGACGAA
AGTATCAACGTACTTGACTTGTTTGCCACCCCCAAATAGCAGCCCGCTAC
GTACGTACCGATTATGTTCTCCCTGTTGCCCGAAAAAAGTCGAAAACGTA
GATATCGTGGCTGAGTGCAACTCATTTCTTCTGTTCTGCGCTGTTCGTTC
TTCGGTGTTCGTTCTTCGGTGTTCGTTTTTCCTGCGCGTTGTCGCGTGCG
TGCGTGCGTGCGTGCTCGCTCCGTTCTTATTGCTGGCGGTTCGGCGGCTC
GGCAGGCGGTTAAGGTGTGCGACGCCACCGTCCGCAAACGCCTCCTCGAG
TTTGAGGCCACCCCCACCTCTCAGCTCACCGTGGAGGAGCTCAACAAGCT
GCCGCAGACCGTGGCCTTCCCGGGAGTGGAAGACGACGCCGCCGCCGCTG
CCGCCGCTTCCCGTGCGCCTGCTGGCGACGGCGGCGGCGACGCCGCGGCG
GACGGCAGCGGGCAACCGGCGTCCGGTGCCGCCGGGAACGGCGTCGGGGG
CGCGGCGGCCGCCGCCGCCGCAGCCGCAGCCGGGGTGTCCGTCCTGGTCA
GCGACGTTCGGATGGACCCGCCTGCGTTCATCGCGAACCGGTGAGACGGT
GGGCGAGTTGTTGGTTGTGATCGAGCGAAGGTCTGTGGGCCGGCTGCCGA
CAGCAGTAGTGTCTGCCTGCATAAGAGTGGGGTCGAGGTTTTCACTTCGA
AAGGCTGTTTTTTATCCATCAGAGGCGCGGCGGTGTGCTCGAGTTTGCTG
ACAAGCAACAGACTGCTGACTGCTCATGTGTTTCACGTGACAATGTAACC
GTTTCGGCTGCCTGCCGTCCTTAAGCTTTGTTTCCACGCGTGGCGGCAGT
CTGCAAGCAAGCAGGCAGTCTGCCGGCAGGCAGTGTTAGGCAAAGCGTCG
GGGGGGGGGAGGGGCACGACCGGGAGGGTGGTGGCAGGCAATGAAACGAC
TCAGTTTTCTTTGGTGGTATTCGCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCN
NNNNGGGGGGAAGGGGGGGGGGGGGGGGGGGGGGGCGCGCGGGGGGGGGG
GGGGGGGGCAGAAAAACCACCCTTTTTTTTTTGGGGTTTTCCCCCCCCCC
CCCCCCCCCCCCGCGCTCGCGCACGCCACCACACTCACGCATAGTTTCCC
TGTGCTGCCCCTGCCGCTTTACCGCTACTTTTCCCACACGTCATCGTTCA
TCGCGCAAAGACCCCCAACGGCGCCCCCGGTGCGATCTCTCATGCCACCG
TTGTCGTACCCGGCTGCATGCAAACCTGGTGCTCTCTGAACTGCACGTTT
GTACATACCTCGCGGTGGCCGCCCTCCCTCTCTTCCTCTCTCTCTCTCTC
TCCCTCTCTCAGTATCCGGGACGGCCGCCTGAAGATGCCGTGGACGGAAC
CTACCCCGCCGGAGAGCTGCGGCGCGAAGGCGGGGCGGCGCAAGGGCGCC
AAGAAGGCGGCCGGCGGCGGAGCGGCCTCGGCCGGGTCGGTGCGGCCGAG
GGGTGGCACCCGGAAGCACGGCGACGGCGGGGATAAAGGCGGACGGGGCG
GCGGCGCTTCCGCCAAGAAGATGTCGCCGCCGAAGCGCAGAGGCGGCACT
TCGCGGGAGGACGATGATAGCTCGAGCGGCAGCAGCAGCGGCGGCGGCAG
CGGCAGCGACGACGACGATGATGACGAGGAAGAGGACGAGGAAGAGGAAG
GTATCGCCGGGAGGAGAGTGCTGCCGAAGCGCAAGGCCGCCGCCGCCGCC
GCCGCCGCCGTTTCGAAGAGTAGCAAGGCGAGCGGGGACGACGAGACAGA
AACCGACGACGGCGACGAGGACGATGAGGGCGGTAGCGGGGACGAGGACG
ACGATTCCGAGTACTCGTCGGGAGAGGAAGAGGAGAGAGACTCGGATGAC
GATGGCCCGGGGCACAGCAAGGCGACCGTGGGCCGCCGCCGTCGAGGCGG
AGGAGGCAGCAAAGGCAAGGGCAAGGGCAGAGCGGCGGTGGCGGTGCGGA
GCAAGAAGCGGAAGAGGAGGAGGAGGAGGAGGGCGTACTCGGTGGAGGAG
GAGGAAGACGAAGACGGGGAAGAGGAGGAGGAGGACGCAGAGGGAGAGCA
GGGAGAGGGGGTGCGCCTGTCCTCCAAGATGAAGGTCGACGCCAACACGG
ACGAGGGGCGAGAGGCGCTGGTGAGTGCGTGGCATGCGGCTTGGAAGAGG
AGAGAGAAAAAGAGAGAGAGAGAGGTATACAGAGGAGTGAGAAAGCGGAA
CCGGAGGGGAAAGGGGGGAAGCGTCGAGTCACGAAGCGAGAACTACCGCC
CCCCTAGTTTTCGTGCTTGAAGCACGCGCACGCAACCTGCCTCAACCGTG
TGTAGCGGCTCGACCGGCCTGCCTGGAACATTGTCGAGAGCTCTCGTTGT
TATTGAGAAGTGCGGGGCCCTCTCTTGCGTGAGAGCTGCTGCATGCCCGC
ATCCCTCTTGCTCCTTTTCTTCGCTCAGGTTTTCCAAGCCGGTGAGCAAC
TACCACCGAGATTATCTGCAATACCAGTTGTCGACGTTGACAACATGTGC
ATCGAAACTCGTGCTCGTACATATGTCTGTATATACGATATTCACCTGCG
CACCGCCAACGGTCCCGTCCTCCCTCCTTCCCTCCCCTCCCCTCCCCTCC
CCCTCGCCTCGTGTGTTTTGCTACGTTGCTCTTGGTGGTGTCGAAATACG
CTCCCGCACGCGCGCACGCGCACACACACAAACACACCTTCACTTTGGAC
GTGGTGGTGTGTGTGTGTGTGTCGTGTGTGTGTGTGTGTCTCGCCTGCAG
ACGCGGCACGTATTGCACATCAACATCAGGTCAAGCCACAACGTCGACAG
CAAGGCGAGGTCAAGAGCGAAGCGCAGCAAGGTAACAGGCAGTTGTGTGC
TGTGTGTGCTGTGTGTGTGTCTCAAAAACGTGTGGAAACAGAGGCGCAGG
GCGGCGCAGCCTTACGTTGCAGGAGAGGGGTCGTACGGCGGGGGGTCTCT
GTCTTGCACGAGTTTGAGTGAGAAAACAGCAATGGTGTTGGCTGGCGTCG
CTCGCCCTCGTCGCTTGCGGCATGGCCCAGTATTTCGTAGGGGGAACCCG
GACTATATATTATATATGTATGTACATTTTTTTGCTGTTGTTAAAACACA
TGCTGCTCAGATGCCTGCTTCTTTTTTGTACGTACATATGCATGTACGGA
GTTTTCGTTTTGCTGCCGGGCTCTCGAGCGGCCTTTGTCTCGCCGCCGCG
TGAAGACGGCCCTCCCATGTCGGTGTGCCCCGACGGCTTGCTCGCGGACG
GGTAGCATGGGCCCAGCCCATCCCGCGAAGCGCAGAGATGCGCGCGGGCA
GTGGCGTCTCAGCTCGTGCTTGGTGTTGTTTTTCGCTTGTCATGACGTCA
TGACACTCCACGAACCACAAAGCATTCGCCGTTATTATCTTACTAGTGTA
GTAACTGTTGTTGTTTCTTTTCACATTAAAAACCGTTCCGATCTCTACAC
ACCCAATACCTCCCTATGTATGCCCGTACAATCAACACTTGATGCGGTCA
ATTCCGGTGGTCACAAGCTAACTTCTACCTAAATAAAAGGTATACCAGGT
ACACGATAATAAAATGGACCCGAAGGGTCAGCAAAGCGATACAAATCAAA
GACAAATAGTGTGAAGCCCCCCGCTTCCTCCTACACCTAGTACATATGTA
CAAGCCTACACATACTACACTCATACCGTAGGTGACACAAGATACCACAC
CCCCTGAACCGAATTTTAGAGCTCCATTACTCCGCAAGGAAGAGCGTGCC
GGCACCAAGCGACACAGTTTCGGGCAGCCCTCGGCTAGATCTTTCCAACG
CTACCCTTTTTGGCACTGGCGCTCTTCTTGCTGGGGAGGAATCGAGCTTT
GAAAGTCTGCCCAGGGGGTGCGGTTTCTTGTGTCACCTACGGTATACATG
TCGCCGGCACTCCGTCGCTGCTCTTTTCGCCATGCTGATGCGCCGCGTCG
TGTGATGCGAATGCTGCCCCTTTTTTGAGCGAGCAGGTAGAGAGCAAGGT
CTACTCTTGCCTCGAGAGCATGTTCGACGAGGATGAAGCGAAAGGCCTCG
TCGTTGACCCCGCGGACGGCGGTAGCACCCCCCACAGCAAGACCAGCTCT
ACCGCCAACACCAACGCCGAAGGCGACGGCGACGGCGACAGCGACGGCGG
CACCGGCAGCGAGAAAAGACCAGCGGCAGCGGCGGCGGCGGCTGGGCAGG
GCAAACGGGCTGCGAACGGGCACGGCCGGGACCGGGGCCAAGCCCCGACC
CCCGCGGCTTCCGACACAGACAAGGATAAGGTGCGTGCGGCAGCCGTATG
TGCGGGTGTGGTGCGGGGGGGGGGTGTCAAGCAACTCCTGCTCGTGACTA
ACCGAACGAACGGCCCCGCTCGTGGACAGGATGGGGATGGGATATTTGAT
GCGGGGGAGGGTTGAGGTGGACCGGCAACAACGGATGTGGTTACCGTGCA
TGTATAGGTGTAACACGGAAGTGATTTAAGTGCGACGGCCACGACCATGT
GTGGGTGTAACGGGCACGATTATTTGTGAAGGTGTGAAGGTGTGGCAGAA
GTGGTTCGGTGAAACGGGAGGGGTTGGGTGGAGCAGAGGTGTCACTCGGT
GTAACGGAAAAGGGATACATAGTGGTTCGGTGAAATGGGAATGGTCGGGC
GAAGCAGAAGTGTCACTCTGAGGTGAAACGGAAAAAAGTGATCGGGTCTG
ACGGGCTTGGGTGCTCTCGCACCCCGCTCCCGCCCCTCCCTGCCCCTCCC
CGCTACCCCAACCCGTTCCGACGCCGATAAACACTTGGGTTTTTTCTTCC
GCTGCGCGACACTGGCGGACTTCCGAATTTGCTCTTTGTTTTGGTCTCGA
CTTTTCATTTGTTAATCTAGCTGTGCTCGGAGGTGCTCGGACTGTTCTCC
GGTCCATCGACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTGT
TCGTTTCATAAACAATATAATTGAAGTAATAAAAAGTACACAATGAGAGG
GGGGNNNNNNNNNNGTTGTCGACTTGTGTTTTGTCTCTGCTTTTTGTTTG
AGTAATCGGGCGGGATGGGGGGGGGCGGGCGCGGTCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCTCCTGCAGGCCTTCGTAGGTTTTACTGTAA
AAAATCATATGGGATAAAGTATGGAAACGTCTAATTGGGGGTCGGTTTGG
GGTTAGGGTTAGGGTTACGGAACCCCTGCCTATTATTTCCTACATAGACA
GGAGTTTTTCGCAAAGGAGGTCCCCTGCACGTGGTATCATCTTCATCGTA
CTCTCCCCCTGAGTTGGTTCTCTGCCCATGTGCCGTTTCGTAACGCCAGC
AGGCGGGCTCTGGAGCACCCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCTGCTACTGCGAAGGGCAC
GGGCAAGGACAACGGCGGCGGTGCGGATGACGCGGAGTGGGGGTGGGGGA
TGTACTTGCGAACGGAAGAGGACAGCGACAGGACGAAGAAGGAGTGGGAG
AAAGAGCACCAAGGGTGGGAAGATGAACAGGTGGGTGGGTGGGTCAGTCG
GCGAGCTAATTTTCGCTTCGCCGTCTTTGCTCTGGTTTCTTTTCGGGGGT
GGGCGCGGAGAGGGGTGTCGCTGGTGCTGCTGGTGCTGCTGCTACTGCTG
CTGCTGCTACTGCTGCTGTGTTTTATTTGGTTCTCTTTGTTCGGTGGCAA
GCGCGGGCTGGAGTAGATAGCTTTTTTTTTCATATATATCTCCCCCCTCT
TTGCTTTTTCGTCTTGGTCCTCCTCCTCTTTTGTTGCTCTCTGCTACGTA
TGTATGTGTGTTATGTTCTCGAAAAGTATGATGCGCTTCGGTTGGGATTG
GAACTCCTGTCGCAGGTTTTGTGCCTTCCTTGAGTCTGTTCAGGGTGTGG
TGGCATTGAGGGAGTCGTAGAGGAGGCATTTCTCAAACTGAAAGAGCTGG
AACAAAGTGACGCTTCAAGAGCGTGTGTAATCTCTCCTTGCCTTGTCGTT
TATCTTTTTCTTTTCTTTGGCGTTTTTTTTACCGAACGATGCTGTACGCA
CGAGCGGAAAACCGGTTGCCAACGAGACGGTGGCCTGTTTAGGCGCGACA
AGGTTTTTGTAAATCAGGTGATGTGTTCCCGCAGACGACGACTCCTCTCT
GCTTGTTTGCCCACGTCTGTTGCATTTTTTTTTTTTTTTGCGGCGACGCG
CGTCGCAGGAATCGAAGCACAATCTCCAGGCTGAAACGGAAGCTAAGAAT
AAGAAGAAGCGGAAGTACACCCACAGGTAAGAGAGCGCAAAGTCGTTGTT
GGTGTTGGTTTTTGTGTGCCGGCTCCTGTCGGCGTTTTGATGCTGGTGCC
GGTGTTGACGAATAGCCCTGCCTTCAGTTACACCAAAAGTCGTTGCCTCC
TGCATGCATGTTGTGAGACAGACATACAGTGCAGTTTTTTTTTTCTTGCA
AAGTGCGAAACGGATTTCCCAATCAGAGAGACGGACGGGACCTTCTTGTC
CTGTAGAGACAACTGGACCACCTGTTGTTCGAGCCCGTGGTACGTAGAGA
CGACTGACTCCCTTTCCGTTTCCACGGCGCGACGAAGCAAAGACGGAGAG
AAAACAAAGGGGGGCTTGTGGATGAAACCGCTGAGCCGCGGACCGGGTTG
ACTTATGAAACGCAGTTTATGGGCATGTGGGGGCTTCGTAGCTCTCTCTA
CCCCCCCCCCTGTTCCTTCCTTTCGGTAAAAAGACCCTCGAGTCATGCGC
GAAATTGTCCACAGAAGAAAATTCCTTCCCCCCCCCCCCCCCCTTCCCCC
CGACCCCCTTGCTGTCGGCCGTCGATTGGCTTGCACTGCGCCGCTCTGCG
CTGCATGACCGAAACCTTTGCGTTCTACAAGCTGGGCTCGCCGTAAAGCG
CAAGAAATGGCTGAAACGGATTATCCACGCGGTTTTTTCGAGTTGGAACC
TGAAATTTTGACACGCGTGTTTTATGCGTAAAACAAACCCTTTCCTTTTG
CACATTTTTTTTTCTTTTTTTTTTTCCAGTGAGCTAGCCTCATGTCAGTG
GTTTCGAGAATGTTAGTTTATCTTGACAAAAGTGATCGAAATAAAAAAGA
AATGAAAACGTACAGAAGGGAATGAGTTTGTTGTACGCATAAAAAACGCG
TGTCAAAATTTCAGGTTCCAACTCGAAAAAACCGCGTGGGAAATCGCGAA
TTTGAGTGGCCTCCCGGCCTCGGCGCAGGGCCAGGGTTGGAATATATAGG
AAATAGAATTGGCCACAGCCCCCTGGAAAGACTGTGTGATGAAGGGGCCG
CATACACATCTATTTCCGCCCCTGCTGTTCGATATGTGGCCGTGACACAA
CGAAGAGGTGTACCCAATGCACACGACGGCTAAGCACGTGGTGTTTTTGT
ACCGCTCGAGTTGATGCTATTGTATTTGGAAAATCAAACAGTTAAATCAA
AAATGGAACCTAACCCACAGAGAGACAGCCGACTCCCATGAGCTTCGAAC
GGTATTTCATATAGTGACGTAATATTGGTCCAGCCCAGTAGAAAAACACC
TCAGTGACGAAAAAGTCCATCACCTCCCCTGCATAACTCTGCCAGGTCAA
ACAGCATGTATTTCGGGGAGAAACCCTCCGTAACGCTGTGGTGGTACTGT
ATTTGTTGTACAAGTTGTACCAGTCATTTGTTTTTACTTTTTTTTTGCAA
AAAAAAAAAAAAAAAAGAAGTATTTACATAAATGTACAGCAGCAGCAGGA
CCGGTCGTGACTTCCATTCTGCACACGGCCCGCGTTGCAAACAAAACTCA
AAACCCATGCGGCAAGAGACACAAATGCATTTTGTACACGACGACCGGTA
CAAGCATCCCCCCGCCAACCCCGTTCCCCTGCTCCGGCTGGCCGGCCGGC
CAGTGAGCTTCATACACGACGGGGACAGACGTCCTCTGCCACTTGTCTGT
GGCTTTGGGCGTACGCGGGAATCCCATGCCTTGCTTTCGTGTGGGAACGT
GTCTGCTGAGGGGAGCTGCTGCTGATTACGGAGTATTATTTTTTCGTTCC
GCCGCAAAAAAAAAGCGGTTTCGTTTTTTTTTTCTCTCTGTCTAAAACCT
CTATACAAAGTGCGGAGGATTTGGTCCATTTTGAAAAAACCCAGCCAATC
AACTAACAGCCAATACCTGCAAAACCGCTGTGATTGGGTGATTCAGAGGA
TATGCCGAGCACGGCTCAATTCGTTCTCGTTGAAAAGTTATGGCGTGACG
AACAAATGTGAGTTTCAAGGCGAGCCCAGCTTGTACATGTTGTACCCACA
TGCATATGCCCAGTTTGGTGTTGGATTTGCGCCTGTAAAAAATACACGTG
TTTTTTTTTCATATTTTTCCTTTTTTAATCACACACGTTTGCCCTCGGGT
CTTGCCTGCATTTTGGTTTTGGTTTTGGTTTTGCTGTTGGCTGCCCTTCG
TGTGGGCTGATCTGGTGGTCGCTTCTCCCTTGCCTCGATTTCCCTGCGGC
CTTGTTTATGCCTTTGCCAAAGCAGCTCCAAAGCCAACGTGGGCGGCACC
TTCCAAGACAAGGTGTTTTCAGAGGCAGCCAGGAGCAAGTCGCTCAAGAT
CGACCACGCGGCGCTCCAGCGGATCATGAACGTCGACGGCAGCCTTAAGC
AGGTCGATGGTGAGAGCGTGAAGGAAAGGGGCTCTGCCTGCACGCGTGCG
CGGCGGGTGTAGGGCGGGGCTTTTTTTCCTTTTTTTTTTTTTTGCGGTGT
TGTTTCCGCTTGCTTCGCGGTTTTTTTACGTCTCTGGGGCAACGAATCTA
CTGCTAGGCGCGGGCCTCCCATTTCGTTGTTTATCTGATTGCTGATAGTC
TGTGTTCGCTGCACGGCAGCAGGCCTCTTTTTCCTATATATCTGAATAGA
TGGGCCTGGGTTGAGTTCGTTCGCAGAAAAACACTCAGTGAGAGCACACT
CGGTGCGAACTCGCTTTACCGGCCGCGTGTCCTTTCGGCTCGTGTGGGAT
GCCTGCCGAACCGGTCGCTTGGTGCTTTTTTGCTTGTGTGGCTGTTTTAT
GTGATTCGTGGGTGAGTTATCCGTTAATATATAGGCATTGCGCACAGAAG
TGTGCGTCGGTATGTAGAAGACAATGCCCGTCTGCTGTCCAAGAGCTTGT
GTCGGCGTGTCGTGCAGTTAATGGTTTTCCTGTATTTCTGTGTGCCATTT
GCGTCAACTCTTGGAAGGACCCCTCATCGCATGGCACCACTGTTACATCC
GCTGTTACATAGCCTTGTAACTAAATGAATCGTCTCCGTGCGTGCGTGCG
TGCGTCGTGGACACTGGTTGATTTCTTGTGCGTTCGTCTTCGGTACCCTC
TCGCTCCCGCCGGTGTGTTTCGGCGCGTGTCGTGGCGCGCGCGCCCCACA
GAGGACGATGACGCCATGGAAGAAGTCTTCGAGGATAACCTGGCGCCTCC
GCCCGCTTCGTCGTCGTCATCCTCCAAGAACGGCAAGGGGTACGGCGGCC
GAGGAAAGTCGCCGCTCACCCCGAGCCTGTCCTCCTCCTCCTCCTCCTCC
ACTCCGGCGATGGTCAAGCCGTTCGCCGGAAGCGCGGTGCTGCCGCCCGC
CCGCCGCGGCAACACCGCCGGAGCAGGGGCAGGGGCAGGAGCAGCAGGGG
TAGGGGCAAAAGGAGAAGCCACCGCCGCCCCTGTTCGCCGTGGCGGGCCG
AAGAGCCACGGGGGTCGGGGGGCTGGGAAGGGACACCAGGCGGCGGGCGG
TCCGGTGGTGCCGCAGCCCGCGGCGGCGGCCAAGGCCAAGGCCCCCGTGG
TCAAGGCGCCGTGGGCGCGGGCGGGGCCGGACGACGGCGGAGAGAAGGCG
ATCAAGGACGCGCTTGCCCTGCTGGCAATGGGTGGTGGTCTGGTCGATCC
CCCGGCTGCTTCCCCCGCTTCCCCCGCCCTCCCCGGCTTTTCGGGTGTCG
CTGGCGCTAGTGCCGGCGCGACTAAGGCTGTGCCCACGGCTGGAGGAAAC
TCGCCGGCGGCGGTGGCGGCGCCCGCGCCCGCCGCACCCGAGGTCGTCGA
AACTGCTGGAGAGACGAACGGGGCGGAGGAGGAGGGGCAGGAGGGTGGAG
AGGCCGGGGCAGAAGCGGTGGCGGGAGCGGCAGGGGCAGCGGCGGGAGAG
GACGACGAAGAGGACGACGACGAGGAGGACGACGAGGACGCGCTGTACGG
GGAGATCGATGATTTCGACGACCCATACGGCGAAGAGGCGTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1270:842..11634+

>mRNA_L-elsbetiae_contig1270.2167.1 ID=mRNA_L-elsbetiae_contig1270.2167.1|Name=mRNA_L-elsbetiae_contig1270.2167.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5376bp|location=Sequence derived from alignment at L-elsbetiae_contig1270:842..11634+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGAGGGATTTCTTGGCGTCGGGGCGTCAGCCGGCCGGCGTTTGCTG
CGCTGCCCTCACCCTGGCGACGCGCGTCAACCGCATCGAGAGGTCCAAGG
AAGAGATCCGCAAGATGAAGAGGGATTTCTTGGCGTCGGGGCGTCAGCCG
GCCGGCGTTTGCTGCGCTGCCCTCACCCTGGCGACGCGCGTCAACCGCAT
CGAGAGGTCCAAGGAAGAGATCCGCAAGGCGGTTAAGGTGTGCGACGCCA
CCGTCCGCAAACGCCTCCTCGAGTTTGAGGCCACCCCCACCTCTCAGCTC
ACCGTGGAGGAGCTCAACAAGCTGCCGCAGACCGTGGCCTTCCCGGGAGT
GGAAGACGACGCCGCCGCCGCTGCCGCCGCTTCCCGTGCGCCTGCTGGCG
ACGGCGGCGGCGACGCCGCGGCGGACGGCAGCGGGCAACCGGCGTCCGGT
GCCGCCGGGAACGGCGTCGGGGGCGCGGCGGCCGCCGCCGCCGCAGCCGC
AGCCGGGGTGTCCGTCCTGGTCAGCGACGTTCGGATGGACCCGCCTGCGT
TCATCGCGAACCGGCGGTTAAGGTGTGCGACGCCACCGTCCGCAAACGCC
TCCTCGAGTTTGAGGCCACCCCCACCTCTCAGCTCACCGTGGAGGAGCTC
AACAAGCTGCCGCAGACCGTGGCCTTCCCGGGAGTGGAAGACGACGCCGC
CGCCGCTGCCGCCGCTTCCCGTGCGCCTGCTGGCGACGGCGGCGGCGACG
CCGCGGCGGACGGCAGCGGGCAACCGGCGTCCGGTGCCGCCGGGAACGGC
GTCGGGGGCGCGGCGGCCGCCGCCGCCGCAGCCGCAGCCGGGGTGTCCGT
CCTGGTCAGCGACGTTCGGATGGACCCGCCTGCGTTCATCGCGAACCGTA
TCCGGGACGGCCGCCTGAAGATGCCGTGGACGGAACCTACCCCGCCGGAG
AGCTGCGGCGCGAAGGCGGGGCGGCGCAAGGGCGCCAAGAAGGCGGCCGG
CGGCGGAGCGGCCTCGGCCGGGTCGGTGCGGCCGAGGGGTGGCACCCGGA
AGCACGGCGACGGCGGGGATAAAGGCGGACGGGGCGGCGGCGCTTCCGCC
AAGAAGATGTCGCCGCCGAAGCGCAGAGGCGGCACTTCGCGGGAGGACGA
TGATAGCTCGAGCGGCAGCAGCAGCGGCGGCGGCAGCGGCAGCGACGACG
ACGATGATGACGAGGAAGAGGACGAGGAAGAGGAAGGTATCGCCGGGAGG
AGAGTGCTGCCGAAGCGCAAGGCCGCCGCCGCCGCCGCCGCCGCCGTTTC
GAAGAGTAGCAAGGCGAGCGGGGACGACGAGACAGAAACCGACGACGGCG
ACGAGGACGATGAGGGCGGTAGCGGGGACGAGGACGACGATTCCGAGTAC
TCGTCGGGAGAGGAAGAGGAGAGAGACTCGGATGACGATGGCCCGGGGCA
CAGCAAGGCGACCTATCCGGGACGGCCGCCTGAAGATGCCGTGGACGGAA
CCTACCCCGCCGGAGAGCTGCGGCGCGAAGGCGGGGCGGCGCAAGGGCGC
CAAGAAGGCGGCCGGCGGCGGAGCGGCCTCGGCCGGGTCGGTGCGGCCGA
GGGGTGGCACCCGGAAGCACGGCGACGGCGGGGATAAAGGCGGACGGGGC
GGCGGCGCTTCCGCCAAGAAGATGTCGCCGCCGAAGCGCAGAGGCGGCAC
TTCGCGGGAGGACGATGATAGCTCGAGCGGCAGCAGCAGCGGCGGCGGCA
GCGGCAGCGACGACGACGATGATGACGAGGAAGAGGACGAGGAAGAGGAA
GGTATCGCCGGGAGGAGAGTGCTGCCGAAGCGCAAGGCCGCCGCCGCCGC
CGCCGCCGCCGTTTCGAAGAGTAGCAAGGCGAGCGGGGACGACGAGACAG
AAACCGACGACGGCGACGAGGACGATGAGGGCGGTAGCGGGGACGAGGAC
GACGATTCCGAGTACTCGTCGGGAGAGGAAGAGGAGAGAGACTCGGATGA
CGATGGCCCGGGGCACAGCAAGGCGACCCAAGAAGCGGAAGAGGAGGAGG
AGGAGGAGGGCCAAGAAGCGGAAGAGGAGGAGGAGGAGGAGGGCGAGGAG
GAAGACGAAGACGGGGAAGAGGAGGAGGAGGACGCAGAGGGAGAGCAGGG
AGAGGGGGTGCGCCTGTCCTCCAAGATGAAGGTCGACGCCAACACGGACG
AGGGGCGAGAGGCGCTGGAGGAGGAAGACGAAGACGGGGAAGAGGAGGAG
GAGGACGCAGAGGGAGAGCAGGGAGAGGGGGTGCGCCTGTCCTCCAAGAT
GAAGGTCGACGCCAACACGGACGAGGGGCGAGAGGCGCTGACGCGGCACG
TATTGCACATCAACATCAGGTCAAGCCACAACGTCGACAGCAAGGCGAGG
TCAAGAGCGAAGCGCAGCAAGACGCGGCACGTATTGCACATCAACATCAG
GTCAAGCCACAACGTCGACAGCAAGGCGAGGTCAAGAGCGAAGCGCAGCA
AGGTAGAGAGCAAGGTCTACTCTTGCCTCGAGAGCATGTTCGACGAGGAT
GAAGCGAAAGGCCTCGTCGTTGACCCCGCGGACGGCGGTAGCACCCCCCA
CAGCAAGACCAGCTCTACCGCCAACACCAACGCCGAAGGCGACGGCGACG
GCGACAGCGACGGCGGCACCGGCAGCGAGAAAAGACCAGCGGCAGCGGCG
GCGGCGGCTGGGCAGGGCAAACGGGCTGCGAACGGGCACGGCCGGGACCG
GGGCCAAGCCCCGACCCCCGCGGCTTCCGACACAGACAAGGATAAGGTAG
AGAGCAAGGTCTACTCTTGCCTCGAGAGCATGTTCGACGAGGATGAAGCG
AAAGGCCTCGTCGTTGACCCCGCGGACGGCGGTAGCACCCCCCACAGCAA
GACCAGCTCTACCGCCAACACCAACGCCGAAGGCGACGGCGACGGCGACA
GCGACGGCGGCACCGGCAGCGAGAAAAGACCAGCGGCAGCGGCGGCGGCG
GCTGGGCAGGGCAAACGGGCTGCGAACGGGCACGGCCGGGACCGGGGCCA
AGCCCCGACCCCCGCGGCTTCCGACACAGACAAGGATAAGGGCACGGGCA
AGGACAACGGCGGCGGTGCGGATGACGCGGAGTGGGGGTGGGGGATGTAC
TTGCGAACGGAAGAGGACAGCGACAGGACGAAGAAGGAGTGGGAGAAAGA
GCACCAAGGGTGGGAAGATGAACAGGGCACGGGCAAGGACAACGGCGGCG
GTGCGGATGACGCGGAGTGGGGGTGGGGGATGTACTTGCGAACGGAAGAG
GACAGCGACAGGACGAAGAAGGAGTGGGAGAAAGAGCACCAAGGGTGGGA
AGATGAACAGGAATCGAAGCACAATCTCCAGGCTGAAACGGAAGCTAAGA
ATAAGAAGAAGCGGAAGTACACCCACAGGAATCGAAGCACAATCTCCAGG
CTGAAACGGAAGCTAAGAATAAGAAGAAGCGGAAGTACACCCACAGCTCC
AAAGCCAACGTGGGCGGCACCTTCCAAGACAAGGTGTTTTCAGAGGCAGC
CAGGAGCAAGTCGCTCAAGATCGACCACGCGGCGCTCCAGCGGATCATGA
ACGTCGACGGCAGCCTTAAGCAGGTCGATGCTCCAAAGCCAACGTGGGCG
GCACCTTCCAAGACAAGGTGTTTTCAGAGGCAGCCAGGAGCAAGTCGCTC
AAGATCGACCACGCGGCGCTCCAGCGGATCATGAACGTCGACGGCAGCCT
TAAGCAGGTCGATGAGGACGATGACGCCATGGAAGAAGTCTTCGAGGATA
ACCTGGCGCCTCCGCCCGCTTCGTCGTCGTCATCCTCCAAGAACGGCAAG
GGGTACGGCGGCCGAGGAAAGTCGCCGCTCACCCCGAGCCTGTCCTCCTC
CTCCTCCTCCTCCACTCCGGCGATGGTCAAGCCGTTCGCCGGAAGCGCGG
TGCTGCCGCCCGCCCGCCGCGGCAACACCGCCGGAGCAGGGGCAGGGGCA
GGAGCAGCAGGGGTAGGGGCAAAAGGAGAAGCCACCGCCGCCCCTGTTCG
CCGTGGCGGGCCGAAGAGCCACGGGGGTCGGGGGGCTGGGAAGGGACACC
AGGCGGCGGGCGGTCCGAGGACGATGACGCCATGGAAGAAGTCTTCGAGG
ATAACCTGGCGCCTCCGCCCGCTTCGTCGTCGTCATCCTCCAAGAACGGC
AAGGGGTACGGCGGCCGAGGAAAGTCGCCGCTCACCCCGAGCCTGTCCTC
CTCCTCCTCCTCCTCCACTCCGGCGATGGTCAAGCCGTTCGCCGGAAGCG
CGGTGCTGCCGCCCGCCCGCCGCGGCAACACCGCCGGAGCAGGGGCAGGG
GCAGGAGCAGCAGGGGTAGGGGCAAAAGGAGAAGCCACCGCCGCCCCTGT
TCGCCGTGGCGGGCCGAAGAGCCACGGGGGTCGGGGGGCTGGGAAGGGAC
ACCAGGCGGCGGGCGGTCCGGCCCCCGTGGTCAAGGCGCCGTGGGCGCGG
GCGGGGCCGGACGACGGCGGAGAGAAGGCGATCAAGGACGCGCTTGCCCT
GCTGGCAATGGGTGGTGGTCTGGTCGATCCCCCGGCTGCTTCCCCCGCTT
CCCCCGCCCTCCCCGGCTTTTCGGGTGTCGCTGGCGCTAGTGCCGGCGCG
ACTAAGGCTGTGCCCACGGCTGGAGGAAACTCGCCGGCGGCGGTGGCGGC
GCCCGCGCCCGCCGCACCCGAGGTCGTCGAAACTGCTGGAGAGACGAACG
GGGCGGAGGAGGAGGGGCAGGAGGGTGGAGAGGCCGGGGCAGAAGCGGTG
GCGGGAGCGGCAGGGGCAGCGGCGGGAGAGGACGACGAAGAGGACGACGA
CGAGGAGGACGACGAGGACGCGCTGTACGGGGAGATCGATGATTTCGACG
ACCCATACGGCGAAGAGGCGTGAGCCCCCGTGGTCAAGGCGCCGTGGGCG
CGGGCGGGGCCGGACGACGGCGGAGAGAAGGCGATCAAGGACGCGCTTGC
CCTGCTGGCAATGGGTGGTGGTCTGGTCGATCCCCCGGCTGCTTCCCCCG
CTTCCCCCGCCCTCCCCGGCTTTTCGGGTGTCGCTGGCGCTAGTGCCGGC
GCGACTAAGGCTGTGCCCACGGCTGGAGGAAACTCGCCGGCGGCGGTGGC
GGCGCCCGCGCCCGCCGCACCCGAGGTCGTCGAAACTGCTGGAGAGACGA
ACGGGGCGGAGGAGGAGGGGCAGGAGGGTGGAGAGGCCGGGGCAGAAGCG
GTGGCGGGAGCGGCAGGGGCAGCGGCGGGAGAGGACGACGAAGAGGACGA
CGACGAGGAGGACGACGAGGACGCGCTGTACGGGGAGATCGATGATTTCG
ACGACCCATACGGCGAAGAGGCGTGA
back to top